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The map label for this gene is 29142973

Identifier: 29142973

GI number: 29142973

Start: 2676539

End: 2676961

Strand: Direct

Name: 29142973

Synonym: t2598

Alternate gene names: NA

Gene position: 2676539-2676961 (Clockwise)

Preceding gene: 29142972

Following gene: 29142974

Centisome position: 55.85

GC content: 60.99

Gene sequence:

>423_bases
ATGGACATGTCCCTGACTAAACCGGTAAGCGCGGAACAACCCTGCGGCCCCGATCCGGAGTACGATCCGGAATACCTGCT
GCTGTTCAGCCGCGCCGCCCCCCAGGCGGAGGCGCAATATGGTGATTTTGTCAGTACGCCGGAAGCCGTGAACTGGCCGG
AAATTGAGCGTGATGCGCGCCGTCTGCTCACGCGCAGTAAGGATATCCGGGTGTTGATCCTGCTGCTGCGCAGTCGCATC
CAGCAGGCTGGCGCACAGGGACTGGCGGAAATGCTCACACAACTGGCAGAACTGAGCGTAATCTGGTCTGATGCACTCCA
TCCACAGCTGCTTACCGGCGAAGGCGCATCCGCAGAATCTATTGAAGATGCGGCGCTGGCGCGCAGTAATGCCCTGGCGG
CGCGCTGGATCACGAAGGCGTGA

Upstream 100 bases:

>100_bases
CTTGGCTGGACGGCCTGGGCAGGTAAAGCCATGCATGACCGTCCGGTGACCGGCATGATTTTTGAACCTGAACACGGCTT
AACCCACTGAGAGTAATGAT

Downstream 100 bases:

>100_bases
TGGCAGACATTCGCGGTATCACGCTGTCAAACAGTGCCGCCCTGCACCTGCAGGTACGGGACGTGGAGCGCGCGTTATCC
GCCCCTCGCCCGGCTGATGC

Product: hypothetical protein

Products: NA

Alternate protein names: Cytoplasmic Protein; Type VI Secretion-Associated Protein ImpA Family; ImpA Domain Protein; Replication/Virulence Associated Protein; ImpA-Related N-Terminal Family Protein; T6ss A; ImpA-Like Protein

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MDMSLTKPVSAEQPCGPDPEYDPEYLLLFSRAAPQAEAQYGDFVSTPEAVNWPEIERDARRLLTRSKDIRVLILLLRSRI
QQAGAQGLAEMLTQLAELSVIWSDALHPQLLTGEGASAESIEDAALARSNALAARWITKA

Sequences:

>Translated_140_residues
MDMSLTKPVSAEQPCGPDPEYDPEYLLLFSRAAPQAEAQYGDFVSTPEAVNWPEIERDARRLLTRSKDIRVLILLLRSRI
QQAGAQGLAEMLTQLAELSVIWSDALHPQLLTGEGASAESIEDAALARSNALAARWITKA
>Mature_140_residues
MDMSLTKPVSAEQPCGPDPEYDPEYLLLFSRAAPQAEAQYGDFVSTPEAVNWPEIERDARRLLTRSKDIRVLILLLRSRI
QQAGAQGLAEMLTQLAELSVIWSDALHPQLLTGEGASAESIEDAALARSNALAARWITKA

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15376; Mature: 15376

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMSLTKPVSAEQPCGPDPEYDPEYLLLFSRAAPQAEAQYGDFVSTPEAVNWPEIERDAR
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHCCCCCCCCCCCCCCHHHHHHH
RLLTRSKDIRVLILLLRSRIQQAGAQGLAEMLTQLAELSVIWSDALHPQLLTGEGASAES
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHH
IEDAALARSNALAARWITKA
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDMSLTKPVSAEQPCGPDPEYDPEYLLLFSRAAPQAEAQYGDFVSTPEAVNWPEIERDAR
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHCCCCCCCCCCCCCCHHHHHHH
RLLTRSKDIRVLILLLRSRIQQAGAQGLAEMLTQLAELSVIWSDALHPQLLTGEGASAES
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHH
IEDAALARSNALAARWITKA
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA