| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is atsA [H]
Identifier: 29142241
GI number: 29142241
Start: 1873454
End: 1874392
Strand: Reverse
Name: atsA [H]
Synonym: t1810
Alternate gene names: 29142241
Gene position: 1874392-1873454 (Counterclockwise)
Preceding gene: 29142242
Following gene: 29142238
Centisome position: 39.12
GC content: 52.5
Gene sequence:
>939_bases ATGATGAAAAAAAGCGTCGCTATGCTGGCGGTTTGTATGCTGGCGCAAAGCCACCTTGCCATTGCTGCCGGTGCTCCTGC GCCTCAAGAGATCAACATTGTTTTACTGGGCACCAAAGGCGGGCCTTCTTTGCTCAATACAGCCAGACTACCGCAAGCGA CGGCGCTCACTATCGGCGATAAGATATGGCTGATAGATGCCGGCTACGGCGCCAGTCTGCAACTGGTGAAAAATGGCATT CCACTGCGCAACATCAATACTATTTTGCTCACCCATCTGCACAGCGACCACATACTGGATTATCCTTCCTTGCTGATGAA TGCCTGGGCAAGTGGCCTGAAAGACCATACCATACAGGTTTATGGCCCGCCGGGAACCCAGGCGATGACGAAGGCTAGCT GGAAGGTCTTTGACAGGGATATCACGTTACGCATGGAAGAAGAGGGGAAACCCGATCCGCGCAACCTGGTTAAGGCGACC GATATCGGCCAGGGCGTCATCTATAAAGATGAACTGGTCACAATAAGCGCGCTGAAAGTGCCTCATTCCCCTTTCCCGGA CGGTGAAGCGTTTGCTTACCGTTTTGATACTCAGGGTAAGCGAATCGTCTTCTCTGGCGATACGTCCTGGTTTCCTCCGC TTGCAACGTTTGCCCAGGGGGCGGATATCCTGGTACATGAGGCGGTACATGTCCCTTCGGTAGCAAAACTGGCTAATAGT ATTGGCAACGGAAAAACGCTGGCTGAAGCGATTGCGTCGCATCACACCACGATTGAAGATGTCGGTAAGATTGCTCGCGA GGCCCACGTGAAAAAACTGGTGTTAAGTCATCTGGTGCCTGCGACGGTTGCGGATGACGTCTGGCAACAGGAAGCCATGA AAAATTACCCGGGCCCTGTCATTGTCGGTCATGACAATATGACGATAAGCGTACCGTAA
Upstream 100 bases:
>100_bases GCTTATTTCGCCCGTTTCTTTAATCGCCTTGCTGGCTGTTCTCCTTCGCAGTTTCGCCAACGTGAAGTTCCTTCTTTTCT CAACTAAGAAGAGTAAAAAC
Downstream 100 bases:
>100_bases GCATCAGGGCAGGGGTAAACCAACGGGCTGACATCATGTCAGCCCGTTATGCTTTTGGCGATCAGCATGACGCGCAGAGC TTTTGTCTAAAACATTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: AS; Aryl-sulfate sulphohydrolase [H]
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MMKKSVAMLAVCMLAQSHLAIAAGAPAPQEINIVLLGTKGGPSLLNTARLPQATALTIGDKIWLIDAGYGASLQLVKNGI PLRNINTILLTHLHSDHILDYPSLLMNAWASGLKDHTIQVYGPPGTQAMTKASWKVFDRDITLRMEEEGKPDPRNLVKAT DIGQGVIYKDELVTISALKVPHSPFPDGEAFAYRFDTQGKRIVFSGDTSWFPPLATFAQGADILVHEAVHVPSVAKLANS IGNGKTLAEAIASHHTTIEDVGKIAREAHVKKLVLSHLVPATVADDVWQQEAMKNYPGPVIVGHDNMTISVP
Sequences:
>Translated_312_residues MMKKSVAMLAVCMLAQSHLAIAAGAPAPQEINIVLLGTKGGPSLLNTARLPQATALTIGDKIWLIDAGYGASLQLVKNGI PLRNINTILLTHLHSDHILDYPSLLMNAWASGLKDHTIQVYGPPGTQAMTKASWKVFDRDITLRMEEEGKPDPRNLVKAT DIGQGVIYKDELVTISALKVPHSPFPDGEAFAYRFDTQGKRIVFSGDTSWFPPLATFAQGADILVHEAVHVPSVAKLANS IGNGKTLAEAIASHHTTIEDVGKIAREAHVKKLVLSHLVPATVADDVWQQEAMKNYPGPVIVGHDNMTISVP >Mature_312_residues MMKKSVAMLAVCMLAQSHLAIAAGAPAPQEINIVLLGTKGGPSLLNTARLPQATALTIGDKIWLIDAGYGASLQLVKNGI PLRNINTILLTHLHSDHILDYPSLLMNAWASGLKDHTIQVYGPPGTQAMTKASWKVFDRDITLRMEEEGKPDPRNLVKAT DIGQGVIYKDELVTISALKVPHSPFPDGEAFAYRFDTQGKRIVFSGDTSWFPPLATFAQGADILVHEAVHVPSVAKLANS IGNGKTLAEAIASHHTTIEDVGKIAREAHVKKLVLSHLVPATVADDVWQQEAMKNYPGPVIVGHDNMTISVP
Specific function: May function as a glycosulphohydrolase involved with desulfation of sulfated polysaccharides [H]
COG id: COG1234
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily III
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the atsA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.6.1 [H]
Molecular weight: Translated: 33601; Mature: 33601
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKKSVAMLAVCMLAQSHLAIAAGAPAPQEINIVLLGTKGGPSLLNTARLPQATALTIGD CCCHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEEEECCCCCHHHHHHCCCCCEEEEECC KIWLIDAGYGASLQLVKNGIPLRNINTILLTHLHSDHILDYPSLLMNAWASGLKDHTIQV EEEEEECCCCCEEHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEE YGPPGTQAMTKASWKVFDRDITLRMEEEGKPDPRNLVKATDIGQGVIYKDELVTISALKV ECCCCCHHHHHHHHEEECCEEEEEECCCCCCCHHHHEECCCCCCCEEEECCEEEEEEEEC PHSPFPDGEAFAYRFDTQGKRIVFSGDTSWFPPLATFAQGADILVHEAVHVPSVAKLANS CCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCHHHHHCCCCEEEEHHHCCCHHHHHHHH IGNGKTLAEAIASHHTTIEDVGKIAREAHVKKLVLSHLVPATVADDVWQQEAMKNYPGPV CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCE IVGHDNMTISVP EEECCCEEEECC >Mature Secondary Structure MMKKSVAMLAVCMLAQSHLAIAAGAPAPQEINIVLLGTKGGPSLLNTARLPQATALTIGD CCCHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEEEECCCCCHHHHHHCCCCCEEEEECC KIWLIDAGYGASLQLVKNGIPLRNINTILLTHLHSDHILDYPSLLMNAWASGLKDHTIQV EEEEEECCCCCEEHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEE YGPPGTQAMTKASWKVFDRDITLRMEEEGKPDPRNLVKATDIGQGVIYKDELVTISALKV ECCCCCHHHHHHHHEEECCEEEEEECCCCCCCHHHHEECCCCCCCEEEECCEEEEEEEEC PHSPFPDGEAFAYRFDTQGKRIVFSGDTSWFPPLATFAQGADILVHEAVHVPSVAKLANS CCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCHHHHHCCCCEEEEHHHCCCHHHHHHHH IGNGKTLAEAIASHHTTIEDVGKIAREAHVKKLVLSHLVPATVADDVWQQEAMKNYPGPV CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCE IVGHDNMTISVP EEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8535517 [H]