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The map label for this gene is csgC [C]

Identifier: 29142207

GI number: 29142207

Start: 1838434

End: 1838760

Strand: Reverse

Name: csgC [C]

Synonym: t1775

Alternate gene names: 29142207

Gene position: 1838760-1838434 (Counterclockwise)

Preceding gene: 29142208

Following gene: 29142206

Centisome position: 38.37

GC content: 44.95

Gene sequence:

>327_bases
ATGCATACTTTATTGCTCCTTGCCGCACTTTCAAATCAGATTACGTTTACCACGACTCAGCAAGGCGATATTTACACGGT
GATCCCTCAGGTCACATTAAACGAACCCTGCGTCTGTCTGGTGCAAATTCTCTCTGTGCGCGACGGCGTCGGGGGACAAA
GCCATACACAGCAAAAACAAACGCTATCTTTACCTGCTAATCAACCGATTGAGTTGTCTCGTCTTAGTGTAAATATATCT
TCAGAGGACTCGGTTAAAATTATTGTTACTGTTTCGGACGGACAATCACTGCATTTATCACAACAATGGCCGCCTTCTGC
ACAGTAG

Upstream 100 bases:

>100_bases
GTTGGTTTTGGCAACAACGCCACGGCTAACCAGTATTAATTTAGCGTCTGCGCTAATAAAAAAACAGGGCGTAAGCCCTG
TTTTTTTTCGGGAGGAAATT

Downstream 100 bases:

>100_bases
TTTTTGATGGTGGCGGAAATGGATTGGCTGACCTGGGTATTAAAGAGGCGATAAAAGCGTCTCATCGTCTCGGCATGTCG
CTAAAAGGTAACGCCGAACC

Product: autoagglutination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MHTLLLLAALSNQITFTTTQQGDIYTVIPQVTLNEPCVCLVQILSVRDGVGGQSHTQQKQTLSLPANQPIELSRLSVNIS
SEDSVKIIVTVSDGQSLHLSQQWPPSAQ

Sequences:

>Translated_108_residues
MHTLLLLAALSNQITFTTTQQGDIYTVIPQVTLNEPCVCLVQILSVRDGVGGQSHTQQKQTLSLPANQPIELSRLSVNIS
SEDSVKIIVTVSDGQSLHLSQQWPPSAQ
>Mature_108_residues
MHTLLLLAALSNQITFTTTQQGDIYTVIPQVTLNEPCVCLVQILSVRDGVGGQSHTQQKQTLSLPANQPIELSRLSVNIS
SEDSVKIIVTVSDGQSLHLSQQWPPSAQ

Specific function: Plays a role in the extracellular assembly of CsgA into thin aggregative fimbriae (Tafi) fibers. Assembly may also require CsgE. Tafi are thought to be assembled via an extracellular nucleation-precipitation (ENP) pathway, and possibly also via an intrace

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsgC/AgfC family [H]

Homologues:

Organism=Escherichia coli, GI1787280, Length=108, Percent_Identity=73.1481481481482, Blast_Score=150, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014491 [H]

Pfam domain/function: PF10610 Tafi-CsgC [H]

EC number: NA

Molecular weight: Translated: 11706; Mature: 11706

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTLLLLAALSNQITFTTTQQGDIYTVIPQVTLNEPCVCLVQILSVRDGVGGQSHTQQKQ
CCCEEEEEECCCCEEEEEECCCCEEEEECCEECCCCHHHHHHHHHHCCCCCCCCCCCCCE
TLSLPANQPIELSRLSVNISSEDSVKIIVTVSDGQSLHLSQQWPPSAQ
EEECCCCCCEEEEEEEEEECCCCCEEEEEEECCCCEEEECCCCCCCCC
>Mature Secondary Structure
MHTLLLLAALSNQITFTTTQQGDIYTVIPQVTLNEPCVCLVQILSVRDGVGGQSHTQQKQ
CCCEEEEEECCCCEEEEEECCCCEEEEECCEECCCCHHHHHHHHHHCCCCCCCCCCCCCE
TLSLPANQPIELSRLSVNISSEDSVKIIVTVSDGQSLHLSQQWPPSAQ
EEECCCCCCEEEEEEEEEECCCCCEEEEEEECCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA