| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is yceA [H]
Identifier: 29142196
GI number: 29142196
Start: 1826099
End: 1827151
Strand: Reverse
Name: yceA [H]
Synonym: t1764
Alternate gene names: 29142196
Gene position: 1827151-1826099 (Counterclockwise)
Preceding gene: 29142200
Following gene: 29142186
Centisome position: 38.13
GC content: 51.38
Gene sequence:
>1053_bases ATGCCAGTGTTACACAACCGCATCTCTAATGACGAGCTGAAAGCCAAAATGCTGGCGGAAAGCGAGCCGCGTACGACAAT TTCTTTTTATAAATATTTCACTATCGCCTCGCCGCAACAGACGCGGGACGCGTTGTATCAGGTGTTTACGGCGTTGGACG TTTTTGGTCGCGTTTACCTGGCGCATGAGGGCATCAATGCGCAAATCAGCGTGCCGCAAAGCAAGGTTGAGACCTTTCGT CAACAGCTTTATACGTTCGACCCCGCGCTGGACGGGGTGCGTTTAAATATCGCGCTGGAGGATGACGGAAAGTCATTTTG GGTGCTGCGTATGAAAGTTCGCGACCGTATCGTCGCTGACGGTATTGACGATCCGAGTTTTGACGCCAGTAATGTCGGCG ATTATCTGAAGGCGGCAGATGTGAATGCGATGCTGGACGATCCTGACGCGGTCTTTATTGATATGCGCAACCACTATGAG TATGAAGTCGGCCATTTCGAAAATGCTCTGGAAATCCCGGCGGATACGTTTCGTGAACAGTTGCCAAAAGCGGTTGAAAT GCTGCGGGAACATGCAGATAAAAAGATAGTGATGTACTGTACCGGCGGTATTCGTTGTGAGAAAGCCAGCGCCTGGATGA AACACAACGGTTTCAATAAAGTCTGGCATATTGAGGGTGGCATCATTGAGTACGCCCGTCGCGCGCGCGAGCAGGGGCTT CCCGTTCGCTTTATCGGCAAAAACTTTGTATTTGATGAGCGAATGGGCGAGCGCATCTCGGATGAGGTTATCGCGCATTG CCATCAGTGCGGCGTGTCCTGCGATAGCCATACCAACTGCAAAAACGACGGTTGCCATCTGCTGTTTATCCAGTGTCCGC AGTGCGCCAGTAAATTTAACGGCTGCTGTAGTGAACAATGCTGTGAAGAGTTGGCCTTGCCGGAGGAAGAACAGCGCCGA CGTCGCGCGGGTCGTGAGAACGGCAACAAAATTTTTAATAAATCGCGGGGTCGGCTTAATAGCAAACTGAGCATTCCCGA TCCGGCTGAGTAA
Upstream 100 bases:
>100_bases AGCAGGAAATGTAGCGCAAAATGTGTGGATGTAAATTGGCGAGACTTGCCTTATCATGCCTGCCCACTTTATTTTTTGCT GATTGCAGGATACGTACACC
Downstream 100 bases:
>100_bases TATTTTGCCGGATAGCGGCGTAAAGGCTGCTATCCGGCATTTCGCCAGGCGTTACTTCTGCTGAACGCCTTCTACTGAGA TGATAAGCTCCACCTCTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MPVLHNRISNDELKAKMLAESEPRTTISFYKYFTIASPQQTRDALYQVFTALDVFGRVYLAHEGINAQISVPQSKVETFR QQLYTFDPALDGVRLNIALEDDGKSFWVLRMKVRDRIVADGIDDPSFDASNVGDYLKAADVNAMLDDPDAVFIDMRNHYE YEVGHFENALEIPADTFREQLPKAVEMLREHADKKIVMYCTGGIRCEKASAWMKHNGFNKVWHIEGGIIEYARRAREQGL PVRFIGKNFVFDERMGERISDEVIAHCHQCGVSCDSHTNCKNDGCHLLFIQCPQCASKFNGCCSEQCCEELALPEEEQRR RRAGRENGNKIFNKSRGRLNSKLSIPDPAE
Sequences:
>Translated_350_residues MPVLHNRISNDELKAKMLAESEPRTTISFYKYFTIASPQQTRDALYQVFTALDVFGRVYLAHEGINAQISVPQSKVETFR QQLYTFDPALDGVRLNIALEDDGKSFWVLRMKVRDRIVADGIDDPSFDASNVGDYLKAADVNAMLDDPDAVFIDMRNHYE YEVGHFENALEIPADTFREQLPKAVEMLREHADKKIVMYCTGGIRCEKASAWMKHNGFNKVWHIEGGIIEYARRAREQGL PVRFIGKNFVFDERMGERISDEVIAHCHQCGVSCDSHTNCKNDGCHLLFIQCPQCASKFNGCCSEQCCEELALPEEEQRR RRAGRENGNKIFNKSRGRLNSKLSIPDPAE >Mature_349_residues PVLHNRISNDELKAKMLAESEPRTTISFYKYFTIASPQQTRDALYQVFTALDVFGRVYLAHEGINAQISVPQSKVETFRQ QLYTFDPALDGVRLNIALEDDGKSFWVLRMKVRDRIVADGIDDPSFDASNVGDYLKAADVNAMLDDPDAVFIDMRNHYEY EVGHFENALEIPADTFREQLPKAVEMLREHADKKIVMYCTGGIRCEKASAWMKHNGFNKVWHIEGGIIEYARRAREQGLP VRFIGKNFVFDERMGERISDEVIAHCHQCGVSCDSHTNCKNDGCHLLFIQCPQCASKFNGCCSEQCCEELALPEEEQRRR RAGRENGNKIFNKSRGRLNSKLSIPDPAE
Specific function: Unknown. [C]
COG id: COG1054
COG function: function code R; Predicted sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain [H]
Homologues:
Organism=Homo sapiens, GI111038120, Length=305, Percent_Identity=28.8524590163934, Blast_Score=119, Evalue=4e-27, Organism=Escherichia coli, GI1787294, Length=350, Percent_Identity=89.1428571428571, Blast_Score=665, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 - InterPro: IPR020936 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: NA
Molecular weight: Translated: 39912; Mature: 39780
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVLHNRISNDELKAKMLAESEPRTTISFYKYFTIASPQQTRDALYQVFTALDVFGRVYL CCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHEE AHEGINAQISVPQSKVETFRQQLYTFDPALDGVRLNIALEDDGKSFWVLRMKVRDRIVAD EECCCCCEEECCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEEEEHHHHHHHC GIDDPSFDASNVGDYLKAADVNAMLDDPDAVFIDMRNHYEYEVGHFENALEIPADTFREQ CCCCCCCCHHHHHHHHHHCCCCCEECCCCEEEEEECCCCEEECCCCCCCCCCCHHHHHHH LPKAVEMLREHADKKIVMYCTGGIRCEKASAWMKHNGFNKVWHIEGGIIEYARRAREQGL HHHHHHHHHHCCCCEEEEEECCCEEECHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCC PVRFIGKNFVFDERMGERISDEVIAHCHQCGVSCDSHTNCKNDGCHLLFIQCPQCASKFN CEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECHHHHHHHC GCCSEQCCEELALPEEEQRRRRAGRENGNKIFNKSRGRLNSKLSIPDPAE CCCHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure PVLHNRISNDELKAKMLAESEPRTTISFYKYFTIASPQQTRDALYQVFTALDVFGRVYL CCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHEE AHEGINAQISVPQSKVETFRQQLYTFDPALDGVRLNIALEDDGKSFWVLRMKVRDRIVAD EECCCCCEEECCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEEEEHHHHHHHC GIDDPSFDASNVGDYLKAADVNAMLDDPDAVFIDMRNHYEYEVGHFENALEIPADTFREQ CCCCCCCCHHHHHHHHHHCCCCCEECCCCEEEEEECCCCEEECCCCCCCCCCCHHHHHHH LPKAVEMLREHADKKIVMYCTGGIRCEKASAWMKHNGFNKVWHIEGGIIEYARRAREQGL HHHHHHHHHHCCCCEEEEEECCCEEECHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCC PVRFIGKNFVFDERMGERISDEVIAHCHQCGVSCDSHTNCKNDGCHLLFIQCPQCASKFN CEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECHHHHHHHC GCCSEQCCEELALPEEEQRRRRAGRENGNKIFNKSRGRLNSKLSIPDPAE CCCHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA