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The map label for this gene is yceH

Identifier: 29142185

GI number: 29142185

Start: 1817135

End: 1817782

Strand: Reverse

Name: yceH

Synonym: t1752

Alternate gene names: 29142185

Gene position: 1817782-1817135 (Counterclockwise)

Preceding gene: 29142186

Following gene: 29142184

Centisome position: 37.93

GC content: 56.17

Gene sequence:

>648_bases
ATGAAATATGAATTAACCGCCACTGAAGCGCGAGTGATTGGCTGTCTGCTGGAAAAGCAGGTGACAACGCCGGAACAGTA
TCCGCTTTCCGTCAACGGGGTGGTGACAGCCTGTAATCAGAAAACCAACCGTGAACCGGTGATGAACCTGACGGAACAAG
AGGTACAAGAACAGCTCGATAACCTGGTGAAACGCCACTTTTTGCGTACGGTCAGCGGGTTTGGCAACCGCGTCACCAAA
TATGAACAGCGCTTCTGTAATTCCGAATTTGGCGATCTGAAACTTAGCGCGGCGGAAGTGGCGCTCGTCACTACGTTGCT
GCTGCGCGGCGCGCAAACGCCCGGCGAGTTGCGTAGCCGGGCGTCGCGGATGCATGAATTCAGCGATATGGCGGAAGTTG
AATCCACGCTGGAACGGCTTGCCAGTCGTGAGGACGGCCCGTATGTCGTCCGTCTGGCGCGTGAACCGGGTAAGCGCGAA
AGCCGCTATATGCACCTTTTTTGCGGCGACGTCGATGAACTGTCTCTCCAGACGTCTGCGCCGGAAAGTGCGTCGGGCGA
TCTTCAGTCGCGCGTCGAAGCGCTGGAAAGCGAAGTGGCGGAGTTAAAGCAGCGGCTGGATTCTTTGTTAGCTCACCTGG
GAGAGTAA

Upstream 100 bases:

>100_bases
ATGGACAATGGCGCGACCATGTCCTGACGGCGTTAACCACGCCGTTATGGACGCCGGGGCGTTGAGCGGCTTACGGAATG
AGAGGCAAAGGGAGAAAACG

Downstream 100 bases:

>100_bases
TGTGAGAACATTACGGATTGGCATTGTCGTGTTAGGTGGTATTGCGCAGAAGGCCTGGCTGCCGGTATTAACCAACACCG
CCGGATGGACGTTACAGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MKYELTATEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLTEQEVQEQLDNLVKRHFLRTVSGFGNRVTK
YEQRFCNSEFGDLKLSAAEVALVTTLLLRGAQTPGELRSRASRMHEFSDMAEVESTLERLASREDGPYVVRLAREPGKRE
SRYMHLFCGDVDELSLQTSAPESASGDLQSRVEALESEVAELKQRLDSLLAHLGE

Sequences:

>Translated_215_residues
MKYELTATEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLTEQEVQEQLDNLVKRHFLRTVSGFGNRVTK
YEQRFCNSEFGDLKLSAAEVALVTTLLLRGAQTPGELRSRASRMHEFSDMAEVESTLERLASREDGPYVVRLAREPGKRE
SRYMHLFCGDVDELSLQTSAPESASGDLQSRVEALESEVAELKQRLDSLLAHLGE
>Mature_215_residues
MKYELTATEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLTEQEVQEQLDNLVKRHFLRTVSGFGNRVTK
YEQRFCNSEFGDLKLSAAEVALVTTLLLRGAQTPGELRSRASRMHEFSDMAEVESTLERLASREDGPYVVRLAREPGKRE
SRYMHLFCGDVDELSLQTSAPESASGDLQSRVEALESEVAELKQRLDSLLAHLGE

Specific function: Unknown

COG id: COG3132

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0502 family

Homologues:

Organism=Escherichia coli, GI1787306, Length=215, Percent_Identity=86.046511627907, Blast_Score=383, Evalue=1e-108,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCEH_SALA4 (B5F939)

Other databases:

- EMBL:   CP001138
- RefSeq:   YP_002146875.1
- ProteinModelPortal:   B5F939
- SMR:   B5F939
- PRIDE:   B5F939
- GeneID:   6794657
- GenomeReviews:   CP001138_GR
- KEGG:   sea:SeAg_B2020
- HOGENOM:   HBG298268
- OMA:   TTPDQYP
- ProtClustDB:   PRK11239
- HAMAP:   MF_01584
- InterPro:   IPR007432
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF04337 DUF480

EC number: NA

Molecular weight: Translated: 24121; Mature: 24121

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYELTATEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLTEQEVQEQLD
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEECCCCCCCCHHHCCHHHHHHHHHH
NLVKRHFLRTVSGFGNRVTKYEQRFCNSEFGDLKLSAAEVALVTTLLLRGAQTPGELRSR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
ASRMHEFSDMAEVESTLERLASREDGPYVVRLAREPGKRESRYMHLFCGDVDELSLQTSA
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHEEEEEECCHHHHCCCCCC
PESASGDLQSRVEALESEVAELKQRLDSLLAHLGE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKYELTATEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLTEQEVQEQLD
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEECCCCCCCCHHHCCHHHHHHHHHH
NLVKRHFLRTVSGFGNRVTKYEQRFCNSEFGDLKLSAAEVALVTTLLLRGAQTPGELRSR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
ASRMHEFSDMAEVESTLERLASREDGPYVVRLAREPGKRESRYMHLFCGDVDELSLQTSA
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHEEEEEECCHHHHCCCCCC
PESASGDLQSRVEALESEVAELKQRLDSLLAHLGE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA