Click here to switch to the map view.

The map label for this gene is flgB [H]

Identifier: 29142179

GI number: 29142179

Start: 1812245

End: 1812661

Strand: Reverse

Name: flgB [H]

Synonym: t1746

Alternate gene names: 29142179

Gene position: 1812661-1812245 (Counterclockwise)

Preceding gene: 29142183

Following gene: 29142178

Centisome position: 37.83

GC content: 53.0

Gene sequence:

>417_bases
ATGCTCGACAGGCTCGATGCCGCCTTACGATTTCAGCAGGAAGCGCTAAATCTGCGCGCGCAACGTCAGGAAATATTAGC
GGCGAATATCGCCAATGCCGATACGCCGGGGTATCAGGCGCGCGATATTGATTTTGCCAGTGAGTTAAAAAAAGTGATGG
TGCGCGGACGGGAAGAAACCGGCGGCGTCGCGTTGTCGTTGACTTCTTCTCGCCATATTCCCGCCCAGGCGGTCTCTTCT
CCCGCAGTGGATCTGCTTTACCGCGTACCCGATCAGCCTTCTTTGGATGGTAACACCGTAGATATGGACAGGGAACGTAC
GCAGTTTGCGGATAACAGTCTCAAATATCAGATGGGGCTTACCGTTCTGGGTAGCCAACTCAAAGGCATGATGAATGTGC
TACAGGGAGGAAACTAA

Upstream 100 bases:

>100_bases
AACGCAATAAATAGCGACGCATTTTGCGTTTATTCCGGCGATAACGCGCGCGTGAAGGCATTTAAGCTGTCGGCTGAATT
TTGCCATTTGCGGAGGAGAT

Downstream 100 bases:

>100_bases
TTCGTGGCGCTGTTAAACATTTTTGATATTGCCGGATCGGCGCTTGCCGCACAGTCCAAGCGGTTGAACGTTGCGGCCAG
TAACCTTGCGAATGCGGATA

Product: flagellar basal body rod protein FlgB

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MLDRLDAALRFQQEALNLRAQRQEILAANIANADTPGYQARDIDFASELKKVMVRGREETGGVALSLTSSRHIPAQAVSS
PAVDLLYRVPDQPSLDGNTVDMDRERTQFADNSLKYQMGLTVLGSQLKGMMNVLQGGN

Sequences:

>Translated_138_residues
MLDRLDAALRFQQEALNLRAQRQEILAANIANADTPGYQARDIDFASELKKVMVRGREETGGVALSLTSSRHIPAQAVSS
PAVDLLYRVPDQPSLDGNTVDMDRERTQFADNSLKYQMGLTVLGSQLKGMMNVLQGGN
>Mature_138_residues
MLDRLDAALRFQQEALNLRAQRQEILAANIANADTPGYQARDIDFASELKKVMVRGREETGGVALSLTSSRHIPAQAVSS
PAVDLLYRVPDQPSLDGNTVDMDRERTQFADNSLKYQMGLTVLGSQLKGMMNVLQGGN

Specific function: Unknown

COG id: COG1815

COG function: function code N; Flagellar basal body protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787313, Length=138, Percent_Identity=80.4347826086957, Blast_Score=235, Evalue=7e-64,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006300 [H]

Pfam domain/function: PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 15134; Mature: 15134

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDRLDAALRFQQEALNLRAQRQEILAANIANADTPGYQARDIDFASELKKVMVRGREET
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
GGVALSLTSSRHIPAQAVSSPAVDLLYRVPDQPSLDGNTVDMDRERTQFADNSLKYQMGL
CCEEEEECCCCCCCHHHHCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHH
TVLGSQLKGMMNVLQGGN
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLDRLDAALRFQQEALNLRAQRQEILAANIANADTPGYQARDIDFASELKKVMVRGREET
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
GGVALSLTSSRHIPAQAVSSPAVDLLYRVPDQPSLDGNTVDMDRERTQFADNSLKYQMGL
CCEEEEECCCCCCCHHHHCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHH
TVLGSQLKGMMNVLQGGN
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2129540; 2404955; 11677609; 8200538; 2181149 [H]