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The map label for this gene is flgH [H]

Identifier: 29142173

GI number: 29142173

Start: 1807564

End: 1808262

Strand: Reverse

Name: flgH [H]

Synonym: t1740

Alternate gene names: 29142173

Gene position: 1808262-1807564 (Counterclockwise)

Preceding gene: 29142174

Following gene: 29142172

Centisome position: 37.74

GC content: 54.22

Gene sequence:

>699_bases
ATGCAAAAATACGCGCTTCACGCTTACCCAGTTATGGCCCTGATGGTCGCGACGCTGACAGGATGCGCCTGGATACCCGC
TAAACCGCTCGTGCAGGGGGCGACCACGGCGCAGCCGATACCTGGCCCGGTACCGGTGGCGAATGGCTCCATATTTCAGT
CTGCGCAGCCGATTAATTATGGCTATCAGCCGCTTTTTGAAGATCGTCGACCGCGTAATATCGGCGATACGCTCACGATT
GTGTTACAGGAAAACGTCAGCGCCAGTAAAAGCTCGTCGGCAAATGCCAGCCGCGACGGCAAAACCAGCTTTGGTTTTGA
TACGGTACCGCGTTATCTGCAGGGATTATTCGGTAATTCCCGCGCGGATATGGAGGCCTCCGGCGGCAACTCTTTTAATG
GTAAAGGCGGCGCGAATGCCAGCAATACCTTTAGCGGCACGCTGACCGTGACCGTCGATCAGGTTCTGGCCAATGGCAAT
TTACACGTCGTGGGGGAAAAACAGATCGCGATTAATCAGGGAACGGAATTCATCCGCTTCTCCGGCGTGGTAAATCCACG
CACCATCAGCGGTAGCAACTCTGTTCCCTCGACACAGGTGGCGGATGCGCGGATTGAATATGTCGGGAACGGCTATATTA
ACGAAGCGCAAAATATGGGCTGGCTGCAACGTTTCTTCCTTAATTTGTCGCCGATGTAA

Upstream 100 bases:

>100_bases
AGTATCGACGACCGATCAGATGCTGCAGAAACTGACGCAACTCTAAGGGGCCGCCGGTGGGGGATACGCCACCGGCTCCC
TGATTTTGAAGATGAAGGTA

Downstream 100 bases:

>100_bases
GCGAGGTGTATGTGTTTAAAGCTCTTGCAGGAATCGTTCTGGCACTGGTTGCCACTCTGGCGCACGCCGAGCGTATCCGG
GATCTGACCAGTGTCCAGGG

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MQKYALHAYPVMALMVATLTGCAWIPAKPLVQGATTAQPIPGPVPVANGSIFQSAQPINYGYQPLFEDRRPRNIGDTLTI
VLQENVSASKSSSANASRDGKTSFGFDTVPRYLQGLFGNSRADMEASGGNSFNGKGGANASNTFSGTLTVTVDQVLANGN
LHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNSVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM

Sequences:

>Translated_232_residues
MQKYALHAYPVMALMVATLTGCAWIPAKPLVQGATTAQPIPGPVPVANGSIFQSAQPINYGYQPLFEDRRPRNIGDTLTI
VLQENVSASKSSSANASRDGKTSFGFDTVPRYLQGLFGNSRADMEASGGNSFNGKGGANASNTFSGTLTVTVDQVLANGN
LHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNSVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM
>Mature_232_residues
MQKYALHAYPVMALMVATLTGCAWIPAKPLVQGATTAQPIPGPVPVANGSIFQSAQPINYGYQPLFEDRRPRNIGDTLTI
VLQENVSASKSSSANASRDGKTSFGFDTVPRYLQGLFGNSRADMEASGGNSFNGKGGANASNTFSGTLTVTVDQVLANGN
LHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNSVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=232, Percent_Identity=90.948275862069, Blast_Score=419, Evalue=1e-118,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 24709; Mature: 24709

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKYALHAYPVMALMVATLTGCAWIPAKPLVQGATTAQPIPGPVPVANGSIFQSAQPINY
CCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTSFGFDTVPRYLQGLFGNS
CCCCHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
RADMEASGGNSFNGKGGANASNTFSGTLTVTVDQVLANGNLHVVGEKQIAINQGTEFIRF
CCCCCCCCCCCCCCCCCCCCCCEECCEEEEEEEHHHHCCCEEEEECCEEEECCCCCEEEE
SGVVNPRTISGSNSVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM
ECCCCCEEECCCCCCCCCHHHHHEEEEECCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQKYALHAYPVMALMVATLTGCAWIPAKPLVQGATTAQPIPGPVPVANGSIFQSAQPINY
CCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTSFGFDTVPRYLQGLFGNS
CCCCHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
RADMEASGGNSFNGKGGANASNTFSGTLTVTVDQVLANGNLHVVGEKQIAINQGTEFIRF
CCCCCCCCCCCCCCCCCCCCCCEECCEEEEEEEHHHHCCCEEEEECCEEEECCCCCEEEE
SGVVNPRTISGSNSVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM
ECCCCCEEECCCCCCCCCHHHHHEEEEECCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA