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The map label for this gene is ybeQ [H]

Identifier: 29142103

GI number: 29142103

Start: 1728669

End: 1730198

Strand: Reverse

Name: ybeQ [H]

Synonym: t1669

Alternate gene names: 29142103

Gene position: 1730198-1728669 (Counterclockwise)

Preceding gene: 29142104

Following gene: 29142102

Centisome position: 36.11

GC content: 49.35

Gene sequence:

>1530_bases
ATGCGTTTTTCATCAATTTTCAAAATAATAATATTAAATATATTTATTTCAAAAATGGCTCACGCTGCTGTCTGCGAGGA
GCGCTATCCCCCCGACTCAGAAGAATGCCAGTACGTTCAGGAATTAGAGCAAAAAGCGGAACAAGGAGATGAAGGCGCGC
AGTTCTCGCTTGGAAGCTGGTATGCGGAGGGGCGATACGTTAAGCCTGATTATAAACTAGCCATAAAATGGCTGGAGAAA
GCGGGTAAACAAGGTTCTGATTTTTCCTATTTCATCCTTGGCTATCATTACAACTATGGTGAAAATTTTCCACTTAGTCG
GCAAAAAGCGCTGGAGTGGTATCGCAAGGCGGCAGAACTAGGGGATAGTAGTACGCAAGAAATCCTCGGTGACGCCTATA
TGTATGGCGATGGGTTTCCCCAAAATACCCAGCTAGCGCTGGAGTGGTATCGAAAAGCCGCCTCTCCAACCAATGATGCG
GGCGTTGTCCGCGGCCAGGGTTCAGCTTCGTCAGCACAATTTAAGCTTGGAGTAATGTACGCCCACGGTCAGGGCGTTCC
TCAGGATTATCAGCAAACGGCGATCTTGATGCGTAAAGCGGCGGAAAATATGTACTACCCCGCGCAACTTTATCTCGGTG
TTGCCTATTTTTATGGTGAAGGCGTGCCTCAGGATTATCGTCAGGCAGTTTACTGGCTTAATGAAGGTATACCAGGCAGC
TATACGCCAGGCCACATTCCGCTGAATGCGCTCTATGATAAAGCGCATCCCGCTGACCAGGTTCACTCTCAGACGTGGTA
TCGAAAAACAGCGCAACGCGTGATGGCAAAGGTACAGTTCAATTTTGGCGTATGGTATTACAACGGTTATCACTTATTGA
AAGATCACAATCTGGCGCTGGAGTGGTATCGCAGAGCCGCAGCGCAGGGATTGGCCGAGGCGCAGGATGCGATCGGCGTG
ATGTTTATGCAGGGCGAGGCCGTTTCTCAGGACTACCAACAGGCGCTGGCGTGGTATCGCAAAGCCGCACGCCAGGGACT
GCCTGCTGCGCAAACGCATCTGGGCATCATGTCTGCTTTTGGTCGCGGCGTCGCGCAAAGCGACAGACAGGCTATCGCAT
GGTATCGAAAAGCAGCAAAACAGGATTTTGCGAAAGCGCAATATCAGCTTGGCGTAGCATATAGCATGGGAAGAGGCGTG
CCTGAAAATAGCCGGAATGCGCTGAAGTGGTACCTTAAAGCGGCAGAGCAGGGGTTTACTCCGGCACAATTAGCGCTTGG
GGAAATTTATGCTCATGGGCGCCAGGGGGTGCCTAAAGATAATAAGCAGGCCTATATTTGGTATTACATGGCAAGTATAT
ATACGGAAAAATCTAAGGATGATTGTTCAGCGCTCATTGCCGAAAGAAACCGACTCAAGGGAACGCTTACCCCAGATCAA
CTTAGCGAGACATATGCCGCCTTTGATCTCATCAGGCGAAAAATCAACCAGTCAAAGGAGGCGAAAAAGATTGCCAGGAA
GAAGTATTGA

Upstream 100 bases:

>100_bases
TTGTTTCTGGGTTTATTCAGCATCTGTGCGAGTTTTTTGTAAGCAGAAAAAGGATGATGCAGCATATAATCACGCCATAA
ACGACAATAAGGATAGTTGT

Downstream 100 bases:

>100_bases
TAAGATAGCCAATAAGCTATGGCGCCATGGTGTGAAGTCTGCCTGTGGGGTAAGGATACGGGGCAGTGCTGATTGATTTG
AAATTGGTGCCTTATGAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MRFSSIFKIIILNIFISKMAHAAVCEERYPPDSEECQYVQELEQKAEQGDEGAQFSLGSWYAEGRYVKPDYKLAIKWLEK
AGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDA
GVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEGIPGS
YTPGHIPLNALYDKAHPADQVHSQTWYRKTAQRVMAKVQFNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGV
MFMQGEAVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSMGRGV
PENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMASIYTEKSKDDCSALIAERNRLKGTLTPDQ
LSETYAAFDLIRRKINQSKEAKKIARKKY

Sequences:

>Translated_509_residues
MRFSSIFKIIILNIFISKMAHAAVCEERYPPDSEECQYVQELEQKAEQGDEGAQFSLGSWYAEGRYVKPDYKLAIKWLEK
AGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDA
GVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEGIPGS
YTPGHIPLNALYDKAHPADQVHSQTWYRKTAQRVMAKVQFNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGV
MFMQGEAVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSMGRGV
PENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMASIYTEKSKDDCSALIAERNRLKGTLTPDQ
LSETYAAFDLIRRKINQSKEAKKIARKKY
>Mature_509_residues
MRFSSIFKIIILNIFISKMAHAAVCEERYPPDSEECQYVQELEQKAEQGDEGAQFSLGSWYAEGRYVKPDYKLAIKWLEK
AGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDA
GVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEGIPGS
YTPGHIPLNALYDKAHPADQVHSQTWYRKTAQRVMAKVQFNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGV
MFMQGEAVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSMGRGV
PENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMASIYTEKSKDDCSALIAERNRLKGTLTPDQ
LSETYAAFDLIRRKINQSKEAKKIARKKY

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=350, Percent_Identity=26.5714285714286, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI151301150, Length=356, Percent_Identity=25.561797752809, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI217330658, Length=177, Percent_Identity=28.8135593220339, Blast_Score=66, Evalue=6e-11,
Organism=Homo sapiens, GI217330656, Length=177, Percent_Identity=28.8135593220339, Blast_Score=66, Evalue=6e-11,
Organism=Escherichia coli, GI87081769, Length=287, Percent_Identity=31.3588850174216, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1786867, Length=128, Percent_Identity=36.71875, Blast_Score=79, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI17563256, Length=447, Percent_Identity=25.0559284116331, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI21355295, Length=361, Percent_Identity=28.808864265928, Blast_Score=91, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 57811; Mature: 57811

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFSSIFKIIILNIFISKMAHAAVCEERYPPDSEECQYVQELEQKAEQGDEGAQFSLGSW
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCE
YAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKAAEL
ECCCCEECCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHC
GDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLGVMY
CCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCEEEEEEEE
AHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEGIPGS
ECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC
YTPGHIPLNALYDKAHPADQVHSQTWYRKTAQRVMAKVQFNFGVWYYNGYHLLKDHNLAL
CCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCEEEEECCCHHH
EWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAF
HHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
GRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSMGRGVPENSRNALKWYLKAAEQGFT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
PAQLALGEIYAHGRQGVPKDNKQAYIWYYMASIYTEKSKDDCSALIAERNRLKGTLTPDQ
HHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEHHHHCCCHHHHHHHHHHHHHCCCCCCHHH
LSETYAAFDLIRRKINQSKEAKKIARKKY
HHHHHHHHHHHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure
MRFSSIFKIIILNIFISKMAHAAVCEERYPPDSEECQYVQELEQKAEQGDEGAQFSLGSW
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCE
YAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKAAEL
ECCCCEECCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHC
GDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLGVMY
CCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCEEEEEEEE
AHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEGIPGS
ECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC
YTPGHIPLNALYDKAHPADQVHSQTWYRKTAQRVMAKVQFNFGVWYYNGYHLLKDHNLAL
CCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCEEEEECCCHHH
EWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAF
HHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
GRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSMGRGVPENSRNALKWYLKAAEQGFT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
PAQLALGEIYAHGRQGVPKDNKQAYIWYYMASIYTEKSKDDCSALIAERNRLKGTLTPDQ
HHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEHHHHCCCHHHHHHHHHHHHHCCCCCCHHH
LSETYAAFDLIRRKINQSKEAKKIARKKY
HHHHHHHHHHHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]