| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is 29142089
Identifier: 29142089
GI number: 29142089
Start: 1710213
End: 1711049
Strand: Reverse
Name: 29142089
Synonym: t1653
Alternate gene names: NA
Gene position: 1711049-1710213 (Counterclockwise)
Preceding gene: 29142090
Following gene: 29142085
Centisome position: 35.71
GC content: 47.79
Gene sequence:
>837_bases GTGTCACTTTCTTTGTCGTCGGTTCGCCGTCGTCTTTATCATAATCTGTTCGATTTGACTACGCGCTCAAGTCGCCGTTT TGAAGGGTTATGCGCGCTGTTTGCGCTGCTTAGCGTACTGGTCATTTTTGTTGAATCAGGCGTAGGAACGGAATATCACC TGACATTTGATGAATGGCATATTTTTGTCTGGCTGGAGCTGTGCGTTACCCTGATATTTACCGGTGAATACTTGCTCAGA CTGTTTAGTTGGCCCGAACCGGCAAAATACGTTTTTAGTTTCTGGGGATTTATTGATCTGGTGACGATTTTGCCGCTGTA CGTCATGTGGCTATGGCCGGAAATTAGCCTGAACTATATGTTTGCCTGGCGCGCTATGCGAGCGATTCGCGTGCTGCGTA TTCTTAAACTGCTACGTTTTATGCCATCCCTGCGCGTATTCTGGAGCGCCATTATTAGCGCGCGTCATCAGCTTATTCTG TTCTATTCATTTATTGCGATCGTGATGATTATTTTCGGTGCCCTGATGTATCTTATTGAAGGACCGAAATATGGCTTCAC GACGCTTAATGCCTCGGTGTATTGGGCGATAGTGACAGTCACAACCGTGGGGTACGGTGATATTACGCCGCATACGCCGC TGGGACGTATTGTCGCGTCGGTGCTTATTTTGATTGGTTATTCGGTGATTGCGATTCCTACAGGACTGATTACCACGCAC ATGAGCAGCGCGTTTCAAAAACGTCACTGGCAGCGAAAATGTCCGCAGTGCCAGCAAAGCCAGCATGAACATAGCGCGCA ATATTGTAACCGATGCGGCAGTAAGCTACCGGATTAA
Upstream 100 bases:
>100_bases TGGAAGGGAGTTTTCGCCATGCCGTTTCCTGCCTTAAAGTAGACCCGTTATAATCGCAAGGGCTGACAATTCGTCAGCCC TTCTTTTAGGTGAGGTTACC
Downstream 100 bases:
>100_bases ACAGGCTTGCCGGAGGGCGCTATCAGACGCCATCCGGCCTGAACCGCTTATTCGCGCCAGAGAATATGGCACAGCTTGTG GTCCTTTTCCCGGCACAGCA
Product: membrane transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MSLSLSSVRRRLYHNLFDLTTRSSRRFEGLCALFALLSVLVIFVESGVGTEYHLTFDEWHIFVWLELCVTLIFTGEYLLR LFSWPEPAKYVFSFWGFIDLVTILPLYVMWLWPEISLNYMFAWRAMRAIRVLRILKLLRFMPSLRVFWSAIISARHQLIL FYSFIAIVMIIFGALMYLIEGPKYGFTTLNASVYWAIVTVTTVGYGDITPHTPLGRIVASVLILIGYSVIAIPTGLITTH MSSAFQKRHWQRKCPQCQQSQHEHSAQYCNRCGSKLPD
Sequences:
>Translated_278_residues MSLSLSSVRRRLYHNLFDLTTRSSRRFEGLCALFALLSVLVIFVESGVGTEYHLTFDEWHIFVWLELCVTLIFTGEYLLR LFSWPEPAKYVFSFWGFIDLVTILPLYVMWLWPEISLNYMFAWRAMRAIRVLRILKLLRFMPSLRVFWSAIISARHQLIL FYSFIAIVMIIFGALMYLIEGPKYGFTTLNASVYWAIVTVTTVGYGDITPHTPLGRIVASVLILIGYSVIAIPTGLITTH MSSAFQKRHWQRKCPQCQQSQHEHSAQYCNRCGSKLPD >Mature_277_residues SLSLSSVRRRLYHNLFDLTTRSSRRFEGLCALFALLSVLVIFVESGVGTEYHLTFDEWHIFVWLELCVTLIFTGEYLLRL FSWPEPAKYVFSFWGFIDLVTILPLYVMWLWPEISLNYMFAWRAMRAIRVLRILKLLRFMPSLRVFWSAIISARHQLILF YSFIAIVMIIFGALMYLIEGPKYGFTTLNASVYWAIVTVTTVGYGDITPHTPLGRIVASVLILIGYSVIAIPTGLITTHM SSAFQKRHWQRKCPQCQQSQHEHSAQYCNRCGSKLPD
Specific function: Unknown
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cyclic nucleotide-binding domain [H]
Homologues:
Organism=Homo sapiens, GI27436981, Length=202, Percent_Identity=35.1485148514851, Blast_Score=115, Evalue=4e-26, Organism=Homo sapiens, GI27436974, Length=189, Percent_Identity=36.5079365079365, Blast_Score=110, Evalue=1e-24, Organism=Homo sapiens, GI20070166, Length=184, Percent_Identity=35.8695652173913, Blast_Score=108, Evalue=4e-24, Organism=Homo sapiens, GI4826784, Length=189, Percent_Identity=35.978835978836, Blast_Score=108, Evalue=6e-24, Organism=Homo sapiens, GI27436984, Length=200, Percent_Identity=33.5, Blast_Score=104, Evalue=7e-23, Organism=Homo sapiens, GI27436986, Length=200, Percent_Identity=33.5, Blast_Score=104, Evalue=7e-23, Organism=Homo sapiens, GI9789987, Length=200, Percent_Identity=33.5, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI88758565, Length=227, Percent_Identity=31.2775330396476, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI25952108, Length=208, Percent_Identity=30.7692307692308, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI4826782, Length=238, Percent_Identity=27.3109243697479, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI4504817, Length=211, Percent_Identity=29.8578199052133, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI27436988, Length=272, Percent_Identity=29.0441176470588, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI25952092, Length=204, Percent_Identity=32.3529411764706, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI25952087, Length=223, Percent_Identity=28.6995515695067, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI119395748, Length=193, Percent_Identity=30.0518134715026, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI4504821, Length=237, Percent_Identity=28.2700421940928, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI45383011, Length=206, Percent_Identity=30.0970873786408, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI19424136, Length=261, Percent_Identity=30.6513409961686, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI32479525, Length=249, Percent_Identity=26.9076305220884, Blast_Score=85, Evalue=8e-17, Organism=Homo sapiens, GI26051262, Length=228, Percent_Identity=26.3157894736842, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI26051260, Length=228, Percent_Identity=26.3157894736842, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI26051266, Length=228, Percent_Identity=26.3157894736842, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI26051264, Length=228, Percent_Identity=26.3157894736842, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI32479527, Length=249, Percent_Identity=26.9076305220884, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI26638655, Length=200, Percent_Identity=28, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI26638653, Length=200, Percent_Identity=28, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI4758630, Length=240, Percent_Identity=25.4166666666667, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI5031819, Length=180, Percent_Identity=29.4444444444444, Blast_Score=81, Evalue=9e-16, Organism=Homo sapiens, GI88758576, Length=195, Percent_Identity=30.2564102564103, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI24497462, Length=195, Percent_Identity=30.2564102564103, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI7657289, Length=254, Percent_Identity=26.7716535433071, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI163792201, Length=212, Percent_Identity=27.8301886792453, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI24497458, Length=228, Percent_Identity=28.0701754385965, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI4826786, Length=212, Percent_Identity=27.8301886792453, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI21217561, Length=228, Percent_Identity=28.0701754385965, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI27436993, Length=177, Percent_Identity=29.9435028248588, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI21217563, Length=228, Percent_Identity=28.0701754385965, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI26051268, Length=228, Percent_Identity=26.3157894736842, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI19071574, Length=177, Percent_Identity=29.9435028248588, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI27436996, Length=212, Percent_Identity=27.8301886792453, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI236462242, Length=200, Percent_Identity=27.5, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI24497460, Length=208, Percent_Identity=30.7692307692308, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI13492973, Length=186, Percent_Identity=27.9569892473118, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI236461942, Length=200, Percent_Identity=27.5, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI236462079, Length=200, Percent_Identity=27.5, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI28373065, Length=200, Percent_Identity=27.5, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI236461719, Length=200, Percent_Identity=27.5, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI6912444, Length=217, Percent_Identity=28.110599078341, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17544122, Length=205, Percent_Identity=35.1219512195122, Blast_Score=107, Evalue=8e-24, Organism=Caenorhabditis elegans, GI71989376, Length=194, Percent_Identity=31.9587628865979, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71989381, Length=194, Percent_Identity=31.9587628865979, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71989369, Length=194, Percent_Identity=31.9587628865979, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71989361, Length=216, Percent_Identity=30.5555555555556, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71994134, Length=187, Percent_Identity=33.1550802139037, Blast_Score=104, Evalue=5e-23, Organism=Caenorhabditis elegans, GI193206869, Length=224, Percent_Identity=29.4642857142857, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI25148255, Length=215, Percent_Identity=30.2325581395349, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI71985535, Length=204, Percent_Identity=31.3725490196078, Blast_Score=94, Evalue=7e-20, Organism=Caenorhabditis elegans, GI32564072, Length=201, Percent_Identity=30.3482587064677, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI32564070, Length=201, Percent_Identity=30.3482587064677, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI32564068, Length=201, Percent_Identity=30.3482587064677, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI32564074, Length=201, Percent_Identity=30.3482587064677, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI115532628, Length=201, Percent_Identity=30.3482587064677, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI193207406, Length=213, Percent_Identity=30.9859154929577, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI71998749, Length=201, Percent_Identity=30.3482587064677, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI71994313, Length=263, Percent_Identity=29.277566539924, Blast_Score=91, Evalue=9e-19, Organism=Caenorhabditis elegans, GI71986574, Length=203, Percent_Identity=27.5862068965517, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17569273, Length=203, Percent_Identity=30.5418719211823, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI32564066, Length=244, Percent_Identity=30.7377049180328, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI32564076, Length=215, Percent_Identity=27.4418604651163, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI32564082, Length=218, Percent_Identity=27.0642201834862, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI32564088, Length=215, Percent_Identity=27.4418604651163, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI32564084, Length=215, Percent_Identity=27.4418604651163, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI32564090, Length=218, Percent_Identity=27.0642201834862, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI32564086, Length=215, Percent_Identity=27.4418604651163, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI32564080, Length=218, Percent_Identity=27.0642201834862, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI72000220, Length=228, Percent_Identity=29.3859649122807, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71994320, Length=266, Percent_Identity=28.5714285714286, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71986008, Length=196, Percent_Identity=29.5918367346939, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI71986011, Length=196, Percent_Identity=29.5918367346939, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71986003, Length=196, Percent_Identity=29.5918367346939, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI25147238, Length=206, Percent_Identity=26.6990291262136, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI25147242, Length=206, Percent_Identity=26.6990291262136, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI161084970, Length=201, Percent_Identity=36.318407960199, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI17737641, Length=201, Percent_Identity=36.318407960199, Blast_Score=116, Evalue=1e-26, Organism=Drosophila melanogaster, GI24656289, Length=196, Percent_Identity=32.6530612244898, Blast_Score=101, Evalue=6e-22, Organism=Drosophila melanogaster, GI116007764, Length=207, Percent_Identity=30.4347826086957, Blast_Score=98, Evalue=7e-21, Organism=Drosophila melanogaster, GI24656294, Length=207, Percent_Identity=30.4347826086957, Blast_Score=98, Evalue=7e-21, Organism=Drosophila melanogaster, GI281365536, Length=207, Percent_Identity=30.4347826086957, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI161076829, Length=201, Percent_Identity=29.8507462686567, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24642910, Length=246, Percent_Identity=26.0162601626016, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI45555859, Length=246, Percent_Identity=26.0162601626016, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI45549143, Length=246, Percent_Identity=26.0162601626016, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24642916, Length=246, Percent_Identity=26.0162601626016, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24642914, Length=246, Percent_Identity=26.0162601626016, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI17136468, Length=204, Percent_Identity=26.9607843137255, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI28574020, Length=207, Percent_Identity=27.536231884058, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI221330674, Length=207, Percent_Identity=27.536231884058, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI221330117, Length=260, Percent_Identity=26.5384615384615, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI221330119, Length=260, Percent_Identity=26.5384615384615, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI281363095, Length=260, Percent_Identity=26.5384615384615, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI281363097, Length=260, Percent_Identity=26.5384615384615, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018490 - InterPro: IPR018488 - InterPro: IPR000595 - InterPro: IPR005821 - InterPro: IPR003091 - InterPro: IPR014710 [H]
Pfam domain/function: PF00027 cNMP_binding; PF00520 Ion_trans [H]
EC number: NA
Molecular weight: Translated: 32241; Mature: 32109
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSLSSVRRRLYHNLFDLTTRSSRRFEGLCALFALLSVLVIFVESGVGTEYHLTFDEWH CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHH IFVWLELCVTLIFTGEYLLRLFSWPEPAKYVFSFWGFIDLVTILPLYVMWLWPEISLNYM HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAWRAMRAIRVLRILKLLRFMPSLRVFWSAIISARHQLILFYSFIAIVMIIFGALMYLIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GPKYGFTTLNASVYWAIVTVTTVGYGDITPHTPLGRIVASVLILIGYSVIAIPTGLITTH CCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MSSAFQKRHWQRKCPQCQQSQHEHSAQYCNRCGSKLPD HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SLSLSSVRRRLYHNLFDLTTRSSRRFEGLCALFALLSVLVIFVESGVGTEYHLTFDEWH CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHH IFVWLELCVTLIFTGEYLLRLFSWPEPAKYVFSFWGFIDLVTILPLYVMWLWPEISLNYM HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAWRAMRAIRVLRILKLLRFMPSLRVFWSAIISARHQLILFYSFIAIVMIIFGALMYLIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GPKYGFTTLNASVYWAIVTVTTVGYGDITPHTPLGRIVASVLILIGYSVIAIPTGLITTH CCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MSSAFQKRHWQRKCPQCQQSQHEHSAQYCNRCGSKLPD HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1522059 [H]