| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is ycjX [H]
Identifier: 29142030
GI number: 29142030
Start: 1650320
End: 1651717
Strand: Reverse
Name: ycjX [H]
Synonym: t1590
Alternate gene names: 29142030
Gene position: 1651717-1650320 (Counterclockwise)
Preceding gene: 29142031
Following gene: 29142029
Centisome position: 34.47
GC content: 54.22
Gene sequence:
>1398_bases ATGAAGCGACTTAAAACTGAACTCAACGCGCTGGTCAATCGTGGGGTAGACAGGCATTTGCGTCTTGCCGTAACCGGGTT GAGCCGCAGCGGTAAAACAGCGTTTATCACGGCGATGGTTAACCAGTTGCTTAATGTCCACGCGGGCGCGCGCTTACCGT TGCTCAGCGCGGTACGCGAAGAACGCCTGCTTGGCGTAAAGCGCGTGCCTCAACGTGATTTTGGTATTCCCCGTTTTACC TACGACGAGGGGATACTTCAGCTTTATGGCAATCCTCCCGCCTGGCCCACACCGACGCGCGGCGTCAGTGAGATTCGGCT GGCGTTGCGCTATCGCTCAAACGACTCGCTGCTGCGCCATTTTAAAGATACCTCGACATTGTATCTGGAGATTGTGGACT ATCCAGGGGAATGGTTACTCGATCTGCCCATGCTGGCTCAGGATTATTTAAGCTGGTCCCGTCAGATGAACGGCTTGTTA CAAGGGCAACGCGCTGAGTGGGCCGCAAAATGGCGGCAACTTTGCGACGGGCTCGATCCGCTGGCGCCCGCCGATGAAAA TCGGCTGGCGGAGATTGCCGCCGCCTGGACGGATTATTTGCATCAGTGTAAATCGCAGGGATTGCATTTTATTCAGCCTG GACGGTTTGTTTTGCCGGGCGATATGGCGGGCGCGCCAGCGTTGCAGTTTTTCCCGTGGCCGGATGTGGACGCCTTCGGC GAGTCAAAACTGGCGCAGGCGGATAAACAGACCAACGCTGGAATGCTGCGCGAACGCTTTAACTACTATTGCGAAAAGGT GGTCAAAGGGTTCTACAAAAATCATTTTCTACGCTTTGATCGCCAGATTGTGCTGGTCGACTGTCTGCAACCGCTTAATA GCGGGCCGCAGGCGTTTAATGATATGCGTCTCGCTTTAACGCAGCTGATGCAAAGTTTTCACTATGGTCAGCGAACTCTG TTTCGCCGCTTGTTTTCGCCGGTGATTGATAAATTGCTGTTCGCCGCGACGAAAGCCGACCATGTCACCCTCGACCAACA TGCCAATATGGTGGCCTTGCTCCAGCAGCTTATTCAGGATGCCTGGCAAAATGCCGCGTTTGAAGGCATTAGTATGGATT GCCTGGGGCTGGCGTCGGTACAGGCGACCACCAGCGGCGTGATTGAGGTCAACGGTGAAAAAATCCCGGCTTTACGTGGA AACCGTTTGAGTGACGGCGCGCCGTTAACCGTGTACCCCGGCGAAGTGCCTTCGCGTTTGCCGGGACAAGCGTTTTGGGA TAAGCAGGGCTTTCAGTTCGAAGCCTTTCGTCCGCAGGTAATGGATGTTGATAAACCATTACCACACATTCGTCTGGACG CTGCGCTGGAGTTTTTAATAGGAGATAAGCTGCGATGA
Upstream 100 bases:
>100_bases TTGTTGATCTCTCCGGGTAGTTGATAATAACGTTTTTGCACATATCTATAACGCAGGCTCGTTATTATTTTTTCTTCTCT TCAGGCTCAACAGGATGTCA
Downstream 100 bases:
>100_bases GCGAACCGTTAAAACCGCGTATTGATTTTGCAGAACCGCTAAAGGAGGAACCTACATCGGCCTTCAAAGCGCAGCAAACT TTCAGCGAAGCGGAGTCGCA
Product: ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MKRLKTELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLLNVHAGARLPLLSAVREERLLGVKRVPQRDFGIPRFT YDEGILQLYGNPPAWPTPTRGVSEIRLALRYRSNDSLLRHFKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMNGLL QGQRAEWAAKWRQLCDGLDPLAPADENRLAEIAAAWTDYLHQCKSQGLHFIQPGRFVLPGDMAGAPALQFFPWPDVDAFG ESKLAQADKQTNAGMLRERFNYYCEKVVKGFYKNHFLRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGQRTL FRRLFSPVIDKLLFAATKADHVTLDQHANMVALLQQLIQDAWQNAAFEGISMDCLGLASVQATTSGVIEVNGEKIPALRG NRLSDGAPLTVYPGEVPSRLPGQAFWDKQGFQFEAFRPQVMDVDKPLPHIRLDAALEFLIGDKLR
Sequences:
>Translated_465_residues MKRLKTELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLLNVHAGARLPLLSAVREERLLGVKRVPQRDFGIPRFT YDEGILQLYGNPPAWPTPTRGVSEIRLALRYRSNDSLLRHFKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMNGLL QGQRAEWAAKWRQLCDGLDPLAPADENRLAEIAAAWTDYLHQCKSQGLHFIQPGRFVLPGDMAGAPALQFFPWPDVDAFG ESKLAQADKQTNAGMLRERFNYYCEKVVKGFYKNHFLRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGQRTL FRRLFSPVIDKLLFAATKADHVTLDQHANMVALLQQLIQDAWQNAAFEGISMDCLGLASVQATTSGVIEVNGEKIPALRG NRLSDGAPLTVYPGEVPSRLPGQAFWDKQGFQFEAFRPQVMDVDKPLPHIRLDAALEFLIGDKLR >Mature_465_residues MKRLKTELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLLNVHAGARLPLLSAVREERLLGVKRVPQRDFGIPRFT YDEGILQLYGNPPAWPTPTRGVSEIRLALRYRSNDSLLRHFKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMNGLL QGQRAEWAAKWRQLCDGLDPLAPADENRLAEIAAAWTDYLHQCKSQGLHFIQPGRFVLPGDMAGAPALQFFPWPDVDAFG ESKLAQADKQTNAGMLRERFNYYCEKVVKGFYKNHFLRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGQRTL FRRLFSPVIDKLLFAATKADHVTLDQHANMVALLQQLIQDAWQNAAFEGISMDCLGLASVQATTSGVIEVNGEKIPALRG NRLSDGAPLTVYPGEVPSRLPGQAFWDKQGFQFEAFRPQVMDVDKPLPHIRLDAALEFLIGDKLR
Specific function: Unknown
COG id: COG3106
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_1637 [H]
Homologues:
Organism=Escherichia coli, GI1787581, Length=465, Percent_Identity=94.1935483870968, Blast_Score=916, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007413 [H]
Pfam domain/function: PF04317 DUF463 [H]
EC number: NA
Molecular weight: Translated: 52545; Mature: 52545
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLKTELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLLNVHAGARLPLLSAVRE CCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH ERLLGVKRVPQRDFGIPRFTYDEGILQLYGNPPAWPTPTRGVSEIRLALRYRSNDSLLRH HHHHHHHCCCCCCCCCCCEECCCCHHEECCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHH FKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMNGLLQGQRAEWAAKWRQLCDGLDP HCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC LAPADENRLAEIAAAWTDYLHQCKSQGLHFIQPGRFVLPGDMAGAPALQFFPWPDVDAFG CCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEECCCCCCCCCCEECCCCCCCCCCC ESKLAQADKQTNAGMLRERFNYYCEKVVKGFYKNHFLRFDRQIVLVDCLQPLNSGPQAFN CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHH DMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLFAATKADHVTLDQHANMVALLQQLIQD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCHHHHHHHHHHH AWQNAAFEGISMDCLGLASVQATTSGVIEVNGEKIPALRGNRLSDGAPLTVYPGEVPSRL HHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCC PGQAFWDKQGFQFEAFRPQVMDVDKPLPHIRLDAALEFLIGDKLR CCCHHHCCCCCEEECCCCCHHCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MKRLKTELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLLNVHAGARLPLLSAVRE CCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH ERLLGVKRVPQRDFGIPRFTYDEGILQLYGNPPAWPTPTRGVSEIRLALRYRSNDSLLRH HHHHHHHCCCCCCCCCCCEECCCCHHEECCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHH FKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMNGLLQGQRAEWAAKWRQLCDGLDP HCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC LAPADENRLAEIAAAWTDYLHQCKSQGLHFIQPGRFVLPGDMAGAPALQFFPWPDVDAFG CCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEECCCCCCCCCCEECCCCCCCCCCC ESKLAQADKQTNAGMLRERFNYYCEKVVKGFYKNHFLRFDRQIVLVDCLQPLNSGPQAFN CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHH DMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLFAATKADHVTLDQHANMVALLQQLIQD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCHHHHHHHHHHH AWQNAAFEGISMDCLGLASVQATTSGVIEVNGEKIPALRGNRLSDGAPLTVYPGEVPSRL HHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCC PGQAFWDKQGFQFEAFRPQVMDVDKPLPHIRLDAALEFLIGDKLR CCCHHHCCCCCEEECCCCCHHCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]