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The map label for this gene is ygdR [C]

Identifier: 29142017

GI number: 29142017

Start: 1637642

End: 1637878

Strand: Reverse

Name: ygdR [C]

Synonym: t1577

Alternate gene names: 29142017

Gene position: 1637878-1637642 (Counterclockwise)

Preceding gene: 29142018

Following gene: 29142014

Centisome position: 34.18

GC content: 46.41

Gene sequence:

>237_bases
ATGCAAAAGTGTAGTCTTATTACGGTACTTAGCTTATCAGTGTTGATGCTAGCCGGATGTACAACGACCTATACCATGAC
GACCCGGACGGGAGAGATTATTGAAACGCAGGGTAAGCCGGAGGTTGACACCGCAACCGGAATGACGAAATACGCTGATG
TTTATGGTTATCATCGCGTTATTAAAACCAGTGAAATAGTGCAGACGACAGAAGGCGCATCGAAGCTGGACTGGTAA

Upstream 100 bases:

>100_bases
CAGATACGGACAAACAGGGAGCAATAGCCCTAATCATCCATCTTGCCGTTGCGGTATTCGGTAAAGTACATCAAAAATAG
AGGTGTCAGGGAAACAAGAA

Downstream 100 bases:

>100_bases
TGCGCTAAAGCAGTTGGGAGGCCGTGTCCAGTATGGGTACCGGACTGTTTCTGGGCCTGAATTGAATAGAGCGCCTGTAT
AGCCGAATTCCGGGTCTCGG

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MQKCSLITVLSLSVLMLAGCTTTYTMTTRTGEIIETQGKPEVDTATGMTKYADVYGYHRVIKTSEIVQTTEGASKLDW

Sequences:

>Translated_78_residues
MQKCSLITVLSLSVLMLAGCTTTYTMTTRTGEIIETQGKPEVDTATGMTKYADVYGYHRVIKTSEIVQTTEGASKLDW
>Mature_78_residues
MQKCSLITVLSLSVLMLAGCTTTYTMTTRTGEIIETQGKPEVDTATGMTKYADVYGYHRVIKTSEIVQTTEGASKLDW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8569; Mature: 8569

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKCSLITVLSLSVLMLAGCTTTYTMTTRTGEIIETQGKPEVDTATGMTKYADVYGYHRV
CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHH
IKTSEIVQTTEGASKLDW
HHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MQKCSLITVLSLSVLMLAGCTTTYTMTTRTGEIIETQGKPEVDTATGMTKYADVYGYHRV
CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHH
IKTSEIVQTTEGASKLDW
HHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA