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The map label for this gene is tap [H]

Identifier: 29142001

GI number: 29142001

Start: 1621946

End: 1623100

Strand: Reverse

Name: tap [H]

Synonym: t1561

Alternate gene names: 29142001

Gene position: 1623100-1621946 (Counterclockwise)

Preceding gene: 29142002

Following gene: 29142000

Centisome position: 33.87

GC content: 49.09

Gene sequence:

>1155_bases
ATGTTGAGAAATATCAGCGTCAGGACATGCATTATTCTATTCATGGTATGTACGTTTCTTTTAGTGGATACTTTACAAAT
AACCTTTCTGCACGATCTCCCTATTTTAATTACGTGTAATATCATTTATCTGATCTCGGCATTACTGCTTTGGTGGTATA
TGACCTGCTATCTGGTAGTGCCAATTAATACCGCGAAGAAAAGTATTGAAGAGGTCGCAGCAGGAAACTTGTCTATTCAT
ATCTCCGAATTTGGCAATAATTGCGCCGGGCGACTCATCCCCGGGATTAATAGCCTGTCGGAGAATATTTCCGCGCTGGT
ACGTGAAATCAGATCCTCTTCGCAAACGGCAATGACCCTTTCCGAACAACTGGCGGCGCGCAGTCTGTCGCTATCCGTAA
AGACGGAACAGCAGTCGGCCTCGTTAATTCAAACTGCCGCCAGTATGGATGAAATGGCGGCGAGTACCAAAAACAATGCG
GATAATACCCGAATGGCGAGCATACAGGCGGATTGTGCAACCCAATGCGCCCGTAAAGGCGGTGAGTTAATGGTGCGGGT
TACAGAAAATATGCGTTCTATTACCGACTGTGCCTCGCAGATGACGGAGATTATTTCATTGATTGACGGTATCGCATTCC
AGACTAATATTCTGGCGCTTAACGCGGCGGTAGAGGCTGCGCGGGCGGGCGATCATGGAAAAGGTTTCTCCGTGGTGGCC
AGGGAAGTGCGTAATCTGGCGCATCGTAGCGCTGAGGCGGCAAAAAATATCAAGGCGCTGATCGACGTTACGCATGACAA
TGTGCGGCAGGGGGCCGCCATAGTGCAGGAGGCTGAAAAAAATATGCAGGAGATTGTTGGCGGCTCCGGGCAATTAAACG
TGCTGATGAGTGAAATTTCCACCACCACGCGGGAGCAGGAAAAAGGCATTAACCAGATAACCCTGGCGTTGAGCGATCTG
GAAAGCGCAACCCATAGCAATGTCTTAATGGTTGAAGCGCTATCTGCTTCTTCGGATGTTTTAAAGGCGCAGGTGATCGA
GTTACAGACTAAAACCGACAAATTTCGTTTAAGCCAGCCGGGTTACAGTGAACATGCGCTGTCGCGCTCTCATGTATCAC
CTCTTTCGACCATCACCAGGCGCGGCCAGGCCTGA

Upstream 100 bases:

>100_bases
GTATTGAATATGGAGAATGTCAAAGAAACGAATGGCAATAGGTATCTGAAATGCTATAAAAATAAAACCTGTCTCCTATC
CTGGTTGTAGGCCGTCAAAA

Downstream 100 bases:

>100_bases
TAATACATGTTTGGTAAGCGCCTGTTGCTAAGGCGCTTTTTTCGCACGTTCCCGTCATTCTTTTTGCGCAATGAGAAAAT
GAGAGATTGCTTAACCTTTC

Product: chemo-receptor protein

Products: NA

Alternate protein names: MCP-IV; Dipeptide chemoreceptor protein [H]

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MLRNISVRTCIILFMVCTFLLVDTLQITFLHDLPILITCNIIYLISALLLWWYMTCYLVVPINTAKKSIEEVAAGNLSIH
ISEFGNNCAGRLIPGINSLSENISALVREIRSSSQTAMTLSEQLAARSLSLSVKTEQQSASLIQTAASMDEMAASTKNNA
DNTRMASIQADCATQCARKGGELMVRVTENMRSITDCASQMTEIISLIDGIAFQTNILALNAAVEAARAGDHGKGFSVVA
REVRNLAHRSAEAAKNIKALIDVTHDNVRQGAAIVQEAEKNMQEIVGGSGQLNVLMSEISTTTREQEKGINQITLALSDL
ESATHSNVLMVEALSASSDVLKAQVIELQTKTDKFRLSQPGYSEHALSRSHVSPLSTITRRGQA

Sequences:

>Translated_384_residues
MLRNISVRTCIILFMVCTFLLVDTLQITFLHDLPILITCNIIYLISALLLWWYMTCYLVVPINTAKKSIEEVAAGNLSIH
ISEFGNNCAGRLIPGINSLSENISALVREIRSSSQTAMTLSEQLAARSLSLSVKTEQQSASLIQTAASMDEMAASTKNNA
DNTRMASIQADCATQCARKGGELMVRVTENMRSITDCASQMTEIISLIDGIAFQTNILALNAAVEAARAGDHGKGFSVVA
REVRNLAHRSAEAAKNIKALIDVTHDNVRQGAAIVQEAEKNMQEIVGGSGQLNVLMSEISTTTREQEKGINQITLALSDL
ESATHSNVLMVEALSASSDVLKAQVIELQTKTDKFRLSQPGYSEHALSRSHVSPLSTITRRGQA
>Mature_384_residues
MLRNISVRTCIILFMVCTFLLVDTLQITFLHDLPILITCNIIYLISALLLWWYMTCYLVVPINTAKKSIEEVAAGNLSIH
ISEFGNNCAGRLIPGINSLSENISALVREIRSSSQTAMTLSEQLAARSLSLSVKTEQQSASLIQTAASMDEMAASTKNNA
DNTRMASIQADCATQCARKGGELMVRVTENMRSITDCASQMTEIISLIDGIAFQTNILALNAAVEAARAGDHGKGFSVVA
REVRNLAHRSAEAAKNIKALIDVTHDNVRQGAAIVQEAEKNMQEIVGGSGQLNVLMSEISTTTREQEKGINQITLALSDL
ESATHSNVLMVEALSASSDVLKAQVIELQTKTDKFRLSQPGYSEHALSRSHVSPLSTITRRGQA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=340, Percent_Identity=38.5294117647059, Blast_Score=224, Evalue=1e-59,
Organism=Escherichia coli, GI2367378, Length=300, Percent_Identity=40, Blast_Score=218, Evalue=6e-58,
Organism=Escherichia coli, GI1788195, Length=308, Percent_Identity=40.2597402597403, Blast_Score=213, Evalue=1e-56,
Organism=Escherichia coli, GI1787690, Length=345, Percent_Identity=36.231884057971, Blast_Score=201, Evalue=7e-53,
Organism=Escherichia coli, GI1789453, Length=329, Percent_Identity=35.5623100303951, Blast_Score=165, Evalue=6e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 41624; Mature: 41624

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRNISVRTCIILFMVCTFLLVDTLQITFLHDLPILITCNIIYLISALLLWWYMTCYLVV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEE
PINTAKKSIEEVAAGNLSIHISEFGNNCAGRLIPGINSLSENISALVREIRSSSQTAMTL
ECCHHHHHHHHHHCCCCEEEEECCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHH
SEQLAARSLSLSVKTEQQSASLIQTAASMDEMAASTKNNADNTRMASIQADCATQCARKG
HHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHCC
GELMVRVTENMRSITDCASQMTEIISLIDGIAFQTNILALNAAVEAARAGDHGKGFSVVA
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHEEHHHHHHHHHCCCCCCCHHHHH
REVRNLAHRSAEAAKNIKALIDVTHDNVRQGAAIVQEAEKNMQEIVGGSGQLNVLMSEIS
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
TTTREQEKGINQITLALSDLESATHSNVLMVEALSASSDVLKAQVIELQTKTDKFRLSQP
HHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEECCCC
GYSEHALSRSHVSPLSTITRRGQA
CCHHHHHHHHCCCHHHHHHHCCCC
>Mature Secondary Structure
MLRNISVRTCIILFMVCTFLLVDTLQITFLHDLPILITCNIIYLISALLLWWYMTCYLVV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEE
PINTAKKSIEEVAAGNLSIHISEFGNNCAGRLIPGINSLSENISALVREIRSSSQTAMTL
ECCHHHHHHHHHHCCCCEEEEECCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHH
SEQLAARSLSLSVKTEQQSASLIQTAASMDEMAASTKNNADNTRMASIQADCATQCARKG
HHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHCC
GELMVRVTENMRSITDCASQMTEIISLIDGIAFQTNILALNAAVEAARAGDHGKGFSVVA
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHEEHHHHHHHHHCCCCCCCHHHHH
REVRNLAHRSAEAAKNIKALIDVTHDNVRQGAAIVQEAEKNMQEIVGGSGQLNVLMSEIS
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
TTTREQEKGINQITLALSDLESATHSNVLMVEALSASSDVLKAQVIELQTKTDKFRLSQP
HHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEECCCC
GYSEHALSRSHVSPLSTITRRGQA
CCHHHHHHHHCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6305515; 9097040; 9278503 [H]