| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is mdoD [H]
Identifier: 29141975
GI number: 29141975
Start: 1585323
End: 1586948
Strand: Reverse
Name: mdoD [H]
Synonym: t1531
Alternate gene names: 29141975
Gene position: 1586948-1585323 (Counterclockwise)
Preceding gene: 29141976
Following gene: 29141974
Centisome position: 33.12
GC content: 55.29
Gene sequence:
>1626_bases ATGGCAATGGCCGCCGTGTGCGGTTCCAGCGGTATTGCTTCACTCTTTTCTCAGGCGGCGTTTGCCGCGGAATCCGATAT TGCGGATGGTAAAATTGTCCGTTTTGATTTTGCTGGTCTGCAATCAATGGCCCAGGCGTTAGCGAAAAAGCCCTGGGGTG GCGCGCCGGGACCCTTGCCGGATACGCTCGCCAATCTGACGCCGCAGGCCTATAACAGCATTCAGTATGACGCGGCGCAT TCACTCTGGAACGGTGTTGCCAACCGGCAGCTCGATATTCAGTTTTTCCACGTAGGGATGGGCTTCCGTCGTCGCGTACG CATGTTTTCCGTTGATACGACGACGCATCTTGCTCGCGAGATTCATTTTCGCCCGGAACTGTTTAAATACAACGATGCCG GCGTTGATACGACGCAACTGGAAGGGCAGAGCGATCTCGGTTTCGCCGGTTTCCGTGTCTTTAAAGCGCCGGAACTGGCG CGGCGCGATGTCGTCTCCTTCCTGGGCGCCAGTTATTTCCGGGCGGTAGATGATACTTATCAGTATGGCCTGTCGGCTCG CGGGCTGGCGATAGATACCTATACTGACGGTCAGGAAGAGTTCCCTGACTTCACCGCATTCTGGTTTGACACCGCGAAGC CGGGCGATACTACGTTTACCGTTTACGCTCTGCTGGACAGCGCCAGCGTGACGGGCGCGTATAAGTTTGTGATCCATTGC GAAAAAACGCAGGTGATCATGGATGTAGAAAACCATCTCTACGCCCGTAAAGATATAAAGCAACTTGGCATTGCGCCGAT GACCAGTATGTTTAGCTGTGGGAATAATGAACGCCGGGTATGCGACACCATTCATCCGCAAATTCACGATTCCGATCGGC TGGCGATGTGGCGGGGTAACGGCGAGTGGATTTGCCGCCCGCTGAATAATCCTCAGAAATTACAGTTCAACGCATATATG GACGATAACCCAAAAGGGTTCGGCCTGCTGCAACTCGATCGCGATTTCTCGCATTATCAGGATGTCATGGGCTGGTACAA CAAACGTCCGAGCCTGTGGGTGGAGCCGCGCAGTAAGTGGGGGAAAGGCGCGGTTAGCCTGATGGAGATCCCAACCACTG GCGAAACTCTGGATAATGTGGTCTGTTTCTGGCAGCCGGAAAAAGCGATCAAAGCCGGGGATACGCTGGCGTTTAATTAT CGTTTGTACTGGAGCGCGCAGCCGCCGGTACAATCGCCGCTTGCGCGGGTCATGGCGACCCGTACAGGGATGGGCGGCTT TCCCGAAGGCTGGGCGCCGGGCGAACATTACCCGGATAAATGGGCACGCCGTTTTGCTATTGATTTTGTCGGCGGCGATC TGAAAGCGGCCGCGCCAAAAGGCATTGAGCCGGTAATTACGCTCTCCAGCGGTGAGGCGAAGCAGGTTGAGATCCTCTAC GTAGAGCCTTTCGACGGTTATCGTATCCAGTTTGACTGGTATCCGACCTCGGATTCTACGGCACCGGTGGATATGCGTAT GTTCCTGCGCTGCCAGGGGGAGGCTATCAGCGAAACCTGGCTGTATCAGTATTTCCCGCCCGCGCCGGATAAGCGCCGTT ATGTCGACGATCGTATCATGCGTTAG
Upstream 100 bases:
>100_bases GGGCACATTCTTGCTGCTGAAAAAACCAGCGCGGGACCATTCACAAGACCAGAAGGACTCATTTTCAGGTATGAATCGTA GACGATTTATTAAAGGTTCA
Downstream 100 bases:
>100_bases TCAGTTTGCCTTCTGTACCGCCACAAAGGCGGTACAGGTTGCGGAAATTGCCATGACATAAACCCATTCGTGAGCCGCTG TTTTTGTGACACGGCCTTTT
Product: glucan biosynthesis protein D
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 541; Mature: 540
Protein sequence:
>541_residues MAMAAVCGSSGIASLFSQAAFAAESDIADGKIVRFDFAGLQSMAQALAKKPWGGAPGPLPDTLANLTPQAYNSIQYDAAH SLWNGVANRQLDIQFFHVGMGFRRRVRMFSVDTTTHLAREIHFRPELFKYNDAGVDTTQLEGQSDLGFAGFRVFKAPELA RRDVVSFLGASYFRAVDDTYQYGLSARGLAIDTYTDGQEEFPDFTAFWFDTAKPGDTTFTVYALLDSASVTGAYKFVIHC EKTQVIMDVENHLYARKDIKQLGIAPMTSMFSCGNNERRVCDTIHPQIHDSDRLAMWRGNGEWICRPLNNPQKLQFNAYM DDNPKGFGLLQLDRDFSHYQDVMGWYNKRPSLWVEPRSKWGKGAVSLMEIPTTGETLDNVVCFWQPEKAIKAGDTLAFNY RLYWSAQPPVQSPLARVMATRTGMGGFPEGWAPGEHYPDKWARRFAIDFVGGDLKAAAPKGIEPVITLSSGEAKQVEILY VEPFDGYRIQFDWYPTSDSTAPVDMRMFLRCQGEAISETWLYQYFPPAPDKRRYVDDRIMR
Sequences:
>Translated_541_residues MAMAAVCGSSGIASLFSQAAFAAESDIADGKIVRFDFAGLQSMAQALAKKPWGGAPGPLPDTLANLTPQAYNSIQYDAAH SLWNGVANRQLDIQFFHVGMGFRRRVRMFSVDTTTHLAREIHFRPELFKYNDAGVDTTQLEGQSDLGFAGFRVFKAPELA RRDVVSFLGASYFRAVDDTYQYGLSARGLAIDTYTDGQEEFPDFTAFWFDTAKPGDTTFTVYALLDSASVTGAYKFVIHC EKTQVIMDVENHLYARKDIKQLGIAPMTSMFSCGNNERRVCDTIHPQIHDSDRLAMWRGNGEWICRPLNNPQKLQFNAYM DDNPKGFGLLQLDRDFSHYQDVMGWYNKRPSLWVEPRSKWGKGAVSLMEIPTTGETLDNVVCFWQPEKAIKAGDTLAFNY RLYWSAQPPVQSPLARVMATRTGMGGFPEGWAPGEHYPDKWARRFAIDFVGGDLKAAAPKGIEPVITLSSGEAKQVEILY VEPFDGYRIQFDWYPTSDSTAPVDMRMFLRCQGEAISETWLYQYFPPAPDKRRYVDDRIMR >Mature_540_residues AMAAVCGSSGIASLFSQAAFAAESDIADGKIVRFDFAGLQSMAQALAKKPWGGAPGPLPDTLANLTPQAYNSIQYDAAHS LWNGVANRQLDIQFFHVGMGFRRRVRMFSVDTTTHLAREIHFRPELFKYNDAGVDTTQLEGQSDLGFAGFRVFKAPELAR RDVVSFLGASYFRAVDDTYQYGLSARGLAIDTYTDGQEEFPDFTAFWFDTAKPGDTTFTVYALLDSASVTGAYKFVIHCE KTQVIMDVENHLYARKDIKQLGIAPMTSMFSCGNNERRVCDTIHPQIHDSDRLAMWRGNGEWICRPLNNPQKLQFNAYMD DNPKGFGLLQLDRDFSHYQDVMGWYNKRPSLWVEPRSKWGKGAVSLMEIPTTGETLDNVVCFWQPEKAIKAGDTLAFNYR LYWSAQPPVQSPLARVMATRTGMGGFPEGWAPGEHYPDKWARRFAIDFVGGDLKAAAPKGIEPVITLSSGEAKQVEILYV EPFDGYRIQFDWYPTSDSTAPVDMRMFLRCQGEAISETWLYQYFPPAPDKRRYVDDRIMR
Specific function: Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs) [H]
COG id: COG3131
COG function: function code P; Periplasmic glucans biosynthesis protein
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the opgD/opgG family [H]
Homologues:
Organism=Escherichia coli, GI145693128, Length=540, Percent_Identity=88.7037037037037, Blast_Score=1023, Evalue=0.0, Organism=Escherichia coli, GI1787286, Length=497, Percent_Identity=37.0221327967807, Blast_Score=306, Evalue=2e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014438 - InterPro: IPR007444 - InterPro: IPR011013 - InterPro: IPR014756 - InterPro: IPR006311 [H]
Pfam domain/function: PF04349 MdoG [H]
EC number: NA
Molecular weight: Translated: 60953; Mature: 60822
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMAAVCGSSGIASLFSQAAFAAESDIADGKIVRFDFAGLQSMAQALAKKPWGGAPGPLP CCEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCC DTLANLTPQAYNSIQYDAAHSLWNGVANRQLDIQFFHVGMGFRRRVRMFSVDTTTHLARE HHHHHCCHHHHCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCHHEEEEEEECHHHHHHHH IHFRPELFKYNDAGVDTTQLEGQSDLGFAGFRVFKAPELARRDVVSFLGASYFRAVDDTY HCCCCCEEEECCCCCCCEEECCCCCCCHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHH QYGLSARGLAIDTYTDGQEEFPDFTAFWFDTAKPGDTTFTVYALLDSASVTGAYKFVIHC HHCCCCCCEEEEECCCCHHHCCCEEEEEEECCCCCCCEEEEEEEECCCCCCEEEEEEEEE EKTQVIMDVENHLYARKDIKQLGIAPMTSMFSCGNNERRVCDTIHPQIHDSDRLAMWRGN CCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEHHHCCCCCCCCCCEEEEECC GEWICRPLNNPQKLQFNAYMDDNPKGFGLLQLDRDFSHYQDVMGWYNKRPSLWVEPRSKW CCEEEEECCCCCEEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEECCCCCC GKGAVSLMEIPTTGETLDNVVCFWQPEKAIKAGDTLAFNYRLYWSAQPPVQSPLARVMAT CCCCEEEEECCCCCCCHHCEEEEECCCHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHH RTGMGGFPEGWAPGEHYPDKWARRFAIDFVGGDLKAAAPKGIEPVITLSSGEAKQVEILY HCCCCCCCCCCCCCCCCCHHHHHHEEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEEEE VEPFDGYRIQFDWYPTSDSTAPVDMRMFLRCQGEAISETWLYQYFPPAPDKRRYVDDRIM EECCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCHHHHHHC R C >Mature Secondary Structure AMAAVCGSSGIASLFSQAAFAAESDIADGKIVRFDFAGLQSMAQALAKKPWGGAPGPLP CEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCC DTLANLTPQAYNSIQYDAAHSLWNGVANRQLDIQFFHVGMGFRRRVRMFSVDTTTHLARE HHHHHCCHHHHCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCHHEEEEEEECHHHHHHHH IHFRPELFKYNDAGVDTTQLEGQSDLGFAGFRVFKAPELARRDVVSFLGASYFRAVDDTY HCCCCCEEEECCCCCCCEEECCCCCCCHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHH QYGLSARGLAIDTYTDGQEEFPDFTAFWFDTAKPGDTTFTVYALLDSASVTGAYKFVIHC HHCCCCCCEEEEECCCCHHHCCCEEEEEEECCCCCCCEEEEEEEECCCCCCEEEEEEEEE EKTQVIMDVENHLYARKDIKQLGIAPMTSMFSCGNNERRVCDTIHPQIHDSDRLAMWRGN CCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEHHHCCCCCCCCCCEEEEECC GEWICRPLNNPQKLQFNAYMDDNPKGFGLLQLDRDFSHYQDVMGWYNKRPSLWVEPRSKW CCEEEEECCCCCEEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEECCCCCC GKGAVSLMEIPTTGETLDNVVCFWQPEKAIKAGDTLAFNYRLYWSAQPPVQSPLARVMAT CCCCEEEEECCCCCCCHHCEEEEECCCHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHH RTGMGGFPEGWAPGEHYPDKWARRFAIDFVGGDLKAAAPKGIEPVITLSSGEAKQVEILY HCCCCCCCCCCCCCCCCCHHHHHHEEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEEEE VEPFDGYRIQFDWYPTSDSTAPVDMRMFLRCQGEAISETWLYQYFPPAPDKRRYVDDRIM EECCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCHHHHHHC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA