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The map label for this gene is sgcX

Identifier: 29141965

GI number: 29141965

Start: 1577286

End: 1578404

Strand: Direct

Name: sgcX

Synonym: t1521

Alternate gene names: 29141965

Gene position: 1577286-1578404 (Clockwise)

Preceding gene: 29141963

Following gene: 29141966

Centisome position: 32.92

GC content: 55.67

Gene sequence:

>1119_bases
ATGACCTTTTCTGTGCAGGAAACGCTTTTTTCTTTACTGCGGCTAAACGGGATTTCAGGACATGAAAGCAGTATTGCAAA
CGTTATGCAGCACGCGTTCGAACAGCAGGCCAAAGACGTCTGGCGGGATCGCTTAGGTAATGTCGTCGCCCGTTATGGCA
GCGATAAATCCGACGCGCTTCGCCTGATGATTTTTGCGCATATGGATGAAGTGGGTTTTATGGTACGCAAGATCGAACCC
TCCGGTTTTTTACGTTTTGAACGCGTGGGCGGCCCGGCGCAAATTACTATGCCCGGTTCGATTGTGACGCTTGCCGGATG
TTCAGGCGATATCATGGGCTGTATCGGTATTAAAGCATATCACTTCGCGAAGGGTGACGAGCGCACCCAGCCACCCGCGC
TCGATAAACTCTGGATTGATATCGGCGCAAAAGATAAAGCGGATGCCGAACGAATGGGTATTCAGGTGGGGACGCCAGTA
ACCCTTTACAACCCGCCGCACTGTCTGGGCAACGACCTGGTGTGCAGTAAGGCGCTGGATGACAGGCTGGGGTGTACGGC
GCTACTGGGCGTCGCCGAGGCCCTCGCCTCCACACCGCTTGATATCGCGGTATTCCTGGTCGCGTCGGTACAGGAAGAGT
TCAATATTCGCGGGATTGTTCCCGTTTTACGACGCGTGCGCCCCGACCTGGCGATTGGTATTGATATCACCCCCTCCTGC
GACACGCCTGACCTGCAGGATTACTCGGATGTGCGGGTCAACCACGGCGTCGGCATCACCTGTCTGAACTATCACGGACG
CGGTACGTTGGCGGGACTGATTACGCCGCCGCGTTTGCTGCGGATGCTGGAGACCACCGCGCACGAAAATAATATTCCCG
TACAGCGTGAAGTCGCGCCAGGCGTCATCACCGAAACAGGCTACATTCAGGTTGAACTGGACGGTATTCCCTGCGCCAGT
CTTTCTATTCCCTGCCGCTATACCCACTCGCCAGCCGAAGTCGCCAGCCTGCGCGACCTGGCTGATTGTATCCGTTTACT
GACTGCGCTGGCCAATATGTCGCCAGAACAGTTTCCCATTGACCCTGAAACAGGCGCTACACAAGAGGCACGACCATGA

Upstream 100 bases:

>100_bases
TATTTAGCGTATTTCCGCGTGACACATTTCACACTTATCCAACCATTCTCCGCCTATAAAACGCTCAACGACTGATTGTT
TTATCACCACGGAGACGCCA

Downstream 100 bases:

>100_bases
TGAAAAAGATCCTTGTGGCATGTGGTACCGGCATGTCGACATCAACCATGATTGCACAAAAACTGCAGGACTTTCTTGCG
GAGCAAGGCATTGCGGCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MTFSVQETLFSLLRLNGISGHESSIANVMQHAFEQQAKDVWRDRLGNVVARYGSDKSDALRLMIFAHMDEVGFMVRKIEP
SGFLRFERVGGPAQITMPGSIVTLAGCSGDIMGCIGIKAYHFAKGDERTQPPALDKLWIDIGAKDKADAERMGIQVGTPV
TLYNPPHCLGNDLVCSKALDDRLGCTALLGVAEALASTPLDIAVFLVASVQEEFNIRGIVPVLRRVRPDLAIGIDITPSC
DTPDLQDYSDVRVNHGVGITCLNYHGRGTLAGLITPPRLLRMLETTAHENNIPVQREVAPGVITETGYIQVELDGIPCAS
LSIPCRYTHSPAEVASLRDLADCIRLLTALANMSPEQFPIDPETGATQEARP

Sequences:

>Translated_372_residues
MTFSVQETLFSLLRLNGISGHESSIANVMQHAFEQQAKDVWRDRLGNVVARYGSDKSDALRLMIFAHMDEVGFMVRKIEP
SGFLRFERVGGPAQITMPGSIVTLAGCSGDIMGCIGIKAYHFAKGDERTQPPALDKLWIDIGAKDKADAERMGIQVGTPV
TLYNPPHCLGNDLVCSKALDDRLGCTALLGVAEALASTPLDIAVFLVASVQEEFNIRGIVPVLRRVRPDLAIGIDITPSC
DTPDLQDYSDVRVNHGVGITCLNYHGRGTLAGLITPPRLLRMLETTAHENNIPVQREVAPGVITETGYIQVELDGIPCAS
LSIPCRYTHSPAEVASLRDLADCIRLLTALANMSPEQFPIDPETGATQEARP
>Mature_371_residues
TFSVQETLFSLLRLNGISGHESSIANVMQHAFEQQAKDVWRDRLGNVVARYGSDKSDALRLMIFAHMDEVGFMVRKIEPS
GFLRFERVGGPAQITMPGSIVTLAGCSGDIMGCIGIKAYHFAKGDERTQPPALDKLWIDIGAKDKADAERMGIQVGTPVT
LYNPPHCLGNDLVCSKALDDRLGCTALLGVAEALASTPLDIAVFLVASVQEEFNIRGIVPVLRRVRPDLAIGIDITPSCD
TPDLQDYSDVRVNHGVGITCLNYHGRGTLAGLITPPRLLRMLETTAHENNIPVQREVAPGVITETGYIQVELDGIPCASL
SIPCRYTHSPAEVASLRDLADCIRLLTALANMSPEQFPIDPETGATQEARP

Specific function: Unknown

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M42 family

Homologues:

Organism=Escherichia coli, GI87082417, Length=372, Percent_Identity=84.1397849462366, Blast_Score=651, Evalue=0.0,
Organism=Escherichia coli, GI1790332, Length=354, Percent_Identity=28.5310734463277, Blast_Score=154, Evalue=1e-38,
Organism=Escherichia coli, GI1788727, Length=345, Percent_Identity=29.8550724637681, Blast_Score=124, Evalue=8e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SGCX_SALTI (P58536)

Other databases:

- EMBL:   AL627270
- EMBL:   AE014613
- RefSeq:   NP_455885.1
- RefSeq:   NP_805307.1
- ProteinModelPortal:   P58536
- SMR:   P58536
- GeneID:   1070978
- GeneID:   1247842
- GenomeReviews:   AE014613_GR
- GenomeReviews:   AL513382_GR
- KEGG:   stt:t1521
- KEGG:   sty:STY1452
- HOGENOM:   HBG426188
- OMA:   HPTIVRW
- ProtClustDB:   CLSK894115
- BioCyc:   SENT209261:T1521-MONOMER
- BioCyc:   SENT220341:STY1452-MONOMER
- InterPro:   IPR008007
- PIRSF:   PIRSF001123

Pfam domain/function: PF05343 Peptidase_M42

EC number: NA

Molecular weight: Translated: 40342; Mature: 40211

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: ACT_SITE 212-212

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFSVQETLFSLLRLNGISGHESSIANVMQHAFEQQAKDVWRDRLGNVVARYGSDKSDAL
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHE
RLMIFAHMDEVGFMVRKIEPSGFLRFERVGGPAQITMPGSIVTLAGCSGDIMGCIGIKAY
EEHHHHHHHHHHHEEEEECCCCCEEEEECCCCEEEEECCCEEEEECCCCCEEEEECCEEE
HFAKGDERTQPPALDKLWIDIGAKDKADAERMGIQVGTPVTLYNPPHCLGNDLVCSKALD
EECCCCCCCCCCCCCEEEEECCCCCCCCHHHCCEEECCCEEECCCCCCCCCCHHHHHHHH
DRLGCTALLGVAEALASTPLDIAVFLVASVQEEFNIRGIVPVLRRVRPDLAIGIDITPSC
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEEECCCC
DTPDLQDYSDVRVNHGVGITCLNYHGRGTLAGLITPPRLLRMLETTAHENNIPVQREVAP
CCCCCCCCCCEEEECCCEEEEEEECCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCC
GVITETGYIQVELDGIPCASLSIPCRYTHSPAEVASLRDLADCIRLLTALANMSPEQFPI
CEEECCCEEEEEECCCCCCCEECCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DPETGATQEARP
CCCCCCCCCCCC
>Mature Secondary Structure 
TFSVQETLFSLLRLNGISGHESSIANVMQHAFEQQAKDVWRDRLGNVVARYGSDKSDAL
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHE
RLMIFAHMDEVGFMVRKIEPSGFLRFERVGGPAQITMPGSIVTLAGCSGDIMGCIGIKAY
EEHHHHHHHHHHHEEEEECCCCCEEEEECCCCEEEEECCCEEEEECCCCCEEEEECCEEE
HFAKGDERTQPPALDKLWIDIGAKDKADAERMGIQVGTPVTLYNPPHCLGNDLVCSKALD
EECCCCCCCCCCCCCEEEEECCCCCCCCHHHCCEEECCCEEECCCCCCCCCCHHHHHHHH
DRLGCTALLGVAEALASTPLDIAVFLVASVQEEFNIRGIVPVLRRVRPDLAIGIDITPSC
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEEECCCC
DTPDLQDYSDVRVNHGVGITCLNYHGRGTLAGLITPPRLLRMLETTAHENNIPVQREVAP
CCCCCCCCCCEEEECCCEEEEEEECCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCC
GVITETGYIQVELDGIPCASLSIPCRYTHSPAEVASLRDLADCIRLLTALANMSPEQFPI
CEEECCCEEEEEECCCCCCCEECCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DPETGATQEARP
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504