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The map label for this gene is srfA

Identifier: 29141947

GI number: 29141947

Start: 1555515

End: 1556714

Strand: Direct

Name: srfA

Synonym: t1503

Alternate gene names: NA

Gene position: 1555515-1556714 (Clockwise)

Preceding gene: 29141945

Following gene: 29141948

Centisome position: 32.46

GC content: 55.83

Gene sequence:

>1200_bases
ATGGTTGACTGTCTGGCGATTCCGCAACTTAACGATAATGGCGATCGGGTTGACTGGTATTCGCCGATTGAAGGTCAGGC
GATAGCGTGGAAAGCGGCTGACGAAGAGACACGTTCTCGGGCTTTACGTTATTTAGCCAGCACTTTTGAAAGCGCGGCTG
CACTCAGTCGCAAAAGTCTGCAATCCGGTAAAACAGCGCTCCAGCTATTTGGTTCGCTACTTGAGAAGGCGACGCAATTT
CCCGGCGAAAATCATGTTTTCCTGGTTAACGGCAAACCGGTTATCACCTTCTGGGGATTCGTTAATCTCAACGAAAATAC
ACGCGATGATGTGCTGGACTGCCTGCGGGTAACCGAGGCGATCTCCGACATCCCTCTGGTCGAGCCGGAGCCGCAGCCCG
AAGAAAAGCCGCTGGTAGAGGCGGCGTTTAGTCAGGCGGATGAACCTTTGTTAACGTCTGTCATTGAGCCGCCGAAAATG
CCGGAGGAACCTGCTGCGCCGCCCGTTATCGTTAGCGAGCCGAAGCCTGCCGCACCTATCCCGGTTGCTGAGGCGAAAAG
AGCTCGCCGTCTACCGCTGTGGAGCTTACCTGTCGCTGCCGTGGTTATCGCCGCCGTCGCCACGCCTTTTTTCTGGCCAT
CTTCATCCGTTGACGGGGCCTCTCCTGTTCGCACCGCGCCTGTCGCTACCGCGAAAACTGATGTTACCCCAATGCCTGAA
CTCACCGCGCATTTGCCGCTGCATCGCGCTGAGGTGACGTCCGCCCCCAAAGCGGCGCCGCTGCCGGAAGCGCCTGTTAT
CATTGCCGCTATCCCCAAAGACGCGCTGGTGATGGACAATACGCAGATGAAGCTTGGAACCACGCGCTTTTTAAACGGTA
GCTGGCGGGTCAGCGTGGATGTCAAAGATCCGATTACCGGCAAGCCGCCCTCTCTGCGTTATCAGATCCAAAATAACAAA
GGCATCGCGCGCGTAGTACATGGCGATAACGTGGTTTGTCGGGCGGAAATTTTCTCTGGTCTGCATCAAACGGGCGAGCT
GATGATTAAAAGTCGCGGCAATGCGCGCTGCACCGACGGTTCACGTTATCCGATGCCGGAAATTACCTGTAAAGCAGGCG
TCAATGACGTCGCAACCTGTACCGCCCGTTATGGCGACCACGCGGCAATTCCGTTGACGTTTAAAAAGATAGGTGCCTGA

Upstream 100 bases:

>100_bases
CAATCTGGATGATTATCAGGCCGTGGGCGGCGGCGGTCAGGCCGTATTTGAATCAGCATTGCAAATTCGCGAAACGCTTC
GTCTGCGTAAACAGCAGACG

Downstream 100 bases:

>100_bases
TTTTATGTTGGTCAATCTGTGTGATTACAAACAGAGCGTCACGCTCATTGCAAACAGTGGCGTCCAGTTTCTTGATTTTG
GCTTAACGCCGCAAGAGTCG

Product: virulence effector protein

Products: NA

Alternate protein names: SsrAB Activated Protein; Virulence Factor; SsrAB Activated Gene; Myosin Light Chain Kinase Smooth; Virulence Effector Protein SrfA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MVDCLAIPQLNDNGDRVDWYSPIEGQAIAWKAADEETRSRALRYLASTFESAAALSRKSLQSGKTALQLFGSLLEKATQF
PGENHVFLVNGKPVITFWGFVNLNENTRDDVLDCLRVTEAISDIPLVEPEPQPEEKPLVEAAFSQADEPLLTSVIEPPKM
PEEPAAPPVIVSEPKPAAPIPVAEAKRARRLPLWSLPVAAVVIAAVATPFFWPSSSVDGASPVRTAPVATAKTDVTPMPE
LTAHLPLHRAEVTSAPKAAPLPEAPVIIAAIPKDALVMDNTQMKLGTTRFLNGSWRVSVDVKDPITGKPPSLRYQIQNNK
GIARVVHGDNVVCRAEIFSGLHQTGELMIKSRGNARCTDGSRYPMPEITCKAGVNDVATCTARYGDHAAIPLTFKKIGA

Sequences:

>Translated_399_residues
MVDCLAIPQLNDNGDRVDWYSPIEGQAIAWKAADEETRSRALRYLASTFESAAALSRKSLQSGKTALQLFGSLLEKATQF
PGENHVFLVNGKPVITFWGFVNLNENTRDDVLDCLRVTEAISDIPLVEPEPQPEEKPLVEAAFSQADEPLLTSVIEPPKM
PEEPAAPPVIVSEPKPAAPIPVAEAKRARRLPLWSLPVAAVVIAAVATPFFWPSSSVDGASPVRTAPVATAKTDVTPMPE
LTAHLPLHRAEVTSAPKAAPLPEAPVIIAAIPKDALVMDNTQMKLGTTRFLNGSWRVSVDVKDPITGKPPSLRYQIQNNK
GIARVVHGDNVVCRAEIFSGLHQTGELMIKSRGNARCTDGSRYPMPEITCKAGVNDVATCTARYGDHAAIPLTFKKIGA
>Mature_399_residues
MVDCLAIPQLNDNGDRVDWYSPIEGQAIAWKAADEETRSRALRYLASTFESAAALSRKSLQSGKTALQLFGSLLEKATQF
PGENHVFLVNGKPVITFWGFVNLNENTRDDVLDCLRVTEAISDIPLVEPEPQPEEKPLVEAAFSQADEPLLTSVIEPPKM
PEEPAAPPVIVSEPKPAAPIPVAEAKRARRLPLWSLPVAAVVIAAVATPFFWPSSSVDGASPVRTAPVATAKTDVTPMPE
LTAHLPLHRAEVTSAPKAAPLPEAPVIIAAIPKDALVMDNTQMKLGTTRFLNGSWRVSVDVKDPITGKPPSLRYQIQNNK
GIARVVHGDNVVCRAEIFSGLHQTGELMIKSRGNARCTDGSRYPMPEITCKAGVNDVATCTARYGDHAAIPLTFKKIGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43023; Mature: 43023

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDCLAIPQLNDNGDRVDWYSPIEGQAIAWKAADEETRSRALRYLASTFESAAALSRKSL
CCCEEECCCCCCCCCEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QSGKTALQLFGSLLEKATQFPGENHVFLVNGKPVITFWGFVNLNENTRDDVLDCLRVTEA
HCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEEEEECCCCCHHHHHHHHHHHHH
ISDIPLVEPEPQPEEKPLVEAAFSQADEPLLTSVIEPPKMPEEPAAPPVIVSEPKPAAPI
HHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCC
PVAEAKRARRLPLWSLPVAAVVIAAVATPFFWPSSSVDGASPVRTAPVATAKTDVTPMPE
CHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
LTAHLPLHRAEVTSAPKAAPLPEAPVIIAAIPKDALVMDNTQMKLGTTRFLNGSWRVSVD
HHHCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCEEECCCCEEECCEEEECCCEEEEEE
VKDPITGKPPSLRYQIQNNKGIARVVHGDNVVCRAEIFSGLHQTGELMIKSRGNARCTDG
ECCCCCCCCCCEEEEEECCCCEEEEEECCCEEEHHHHHHHHHHCCEEEEECCCCCCCCCC
SRYPMPEITCKAGVNDVATCTARYGDHAAIPLTFKKIGA
CCCCCCCEEHHCCCCHHHHHHHHCCCCEEEEEEHHHHCC
>Mature Secondary Structure
MVDCLAIPQLNDNGDRVDWYSPIEGQAIAWKAADEETRSRALRYLASTFESAAALSRKSL
CCCEEECCCCCCCCCEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QSGKTALQLFGSLLEKATQFPGENHVFLVNGKPVITFWGFVNLNENTRDDVLDCLRVTEA
HCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEEEEECCCCCHHHHHHHHHHHHH
ISDIPLVEPEPQPEEKPLVEAAFSQADEPLLTSVIEPPKMPEEPAAPPVIVSEPKPAAPI
HHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCC
PVAEAKRARRLPLWSLPVAAVVIAAVATPFFWPSSSVDGASPVRTAPVATAKTDVTPMPE
CHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
LTAHLPLHRAEVTSAPKAAPLPEAPVIIAAIPKDALVMDNTQMKLGTTRFLNGSWRVSVD
HHHCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCEEECCCCEEECCEEEECCCEEEEEE
VKDPITGKPPSLRYQIQNNKGIARVVHGDNVVCRAEIFSGLHQTGELMIKSRGNARCTDG
ECCCCCCCCCCEEEEEECCCCEEEEEECCCEEEHHHHHHHHHHCCEEEEECCCCCCCCCC
SRYPMPEITCKAGVNDVATCTARYGDHAAIPLTFKKIGA
CCCCCCCEEHHCCCCHHHHHHHHCCCCEEEEEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA