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The map label for this gene is yncE

Identifier: 29141940

GI number: 29141940

Start: 1548214

End: 1549275

Strand: Reverse

Name: yncE

Synonym: t1496

Alternate gene names: 29141940

Gene position: 1549275-1548214 (Counterclockwise)

Preceding gene: 29141942

Following gene: 29141939

Centisome position: 32.33

GC content: 51.69

Gene sequence:

>1062_bases
ATGCACTTACGTCATCTTTTTTCGCCGCGCCTGCGTGGTTCTTTATTGTTAGGTTCGCTCCTCGTCGCATCCTCATTTAG
CACGCTGGCGGCGGAAGACATGCTGCGTAAAGCGGTAGGCAAAGGCGCTTATGAGATGGCCTGGAGTCAGCAAGAAAACG
CGCTCTGGCTGGCTACATCGCAAAGCCGTAAACTGGATAAAGGCGGCGTAGTTTATCGTCTCGACCCGGTGACGCTGGAA
ATCACGCAAGCGATTCATAACGATCTCAAGCCGTTCGGCGCCACCATCAATGCCGCGACCCAAACGCTGTGGTTTGGCAA
TACCATTAACAGCGCAGTTACCGCGATTGATGCCAAAACGGGTGATGTAAAAGGTCGTCTGGTACTTGATGCGCGCAAAC
GTACTGAAGAGGTTCGTCCGTTACAGCCCCGTGAGCTGGTTGCCGATGCGGCGACCAACACGATCTACATTAGCGGTGTT
GGTAAAGAGAGTGCTATTTGGGTAGTGGATGGCGAAACCATCAAACTGAAAACGACGATCGAAAATACCGGCAAAATGAG
TACGGGTCTGGCGCTCGACAGTAAAGCACAACGCCTGTACACCACCAATGCGGATGGCGAATTTATCACCATCGATACCG
CCAGCAATAAAATTCTCAGTCGTAAGAAGTTGCTGGATGACGGTAAAGAACACTTCTTTATTAATCTGAGTCTCGATACC
GCAGGTCATCGCGCGTTTATCACCGACTCGAAGGCAACTGAGGTTCTGGTTGTCGATACCCGTAATGGCAATATTCTTGC
CAAAATCGCGGCGCCTGCCTCTTTGGCCGTCCTGTATAATCCGACACGTAACGAGGCGTATGTGACGCACCGTCAGGCAG
GGCAGGTCAGCGTGATCGATGCGAAGACCTATAACGTTGTTAAAACGTTCGATACGCCGACGTACCCGAATAGCCTGGCG
CTATCGGCAGACGGTAAAACGCTCTACGTCAGCGTGAAGCAGAAATCGACACGTGAACAAGAAGCGACGCAGCCGGATGA
TGTTATTCGCATTGCTCTGTAA

Upstream 100 bases:

>100_bases
AATGATTATTATTCTCAACTTATAATAAGTGCGGAACGAAGATCCCGCGCAGCGAAGTAGTGTGAAGCAGCTATACACGT
TTTTATCAAAAGGAGTCGTC

Downstream 100 bases:

>100_bases
ATAGGGTATGGAGGGGGAAACCCCTCCAGTCATCTCTTTAAACGCACCGATACGCCTCGTTAAACCCCGCCGATAGCCTG
ATGATTCTGTGAGAATTACA

Product: ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MHLRHLFSPRLRGSLLLGSLLVASSFSTLAAEDMLRKAVGKGAYEMAWSQQENALWLATSQSRKLDKGGVVYRLDPVTLE
ITQAIHNDLKPFGATINAATQTLWFGNTINSAVTAIDAKTGDVKGRLVLDARKRTEEVRPLQPRELVADAATNTIYISGV
GKESAIWVVDGETIKLKTTIENTGKMSTGLALDSKAQRLYTTNADGEFITIDTASNKILSRKKLLDDGKEHFFINLSLDT
AGHRAFITDSKATEVLVVDTRNGNILAKIAAPASLAVLYNPTRNEAYVTHRQAGQVSVIDAKTYNVVKTFDTPTYPNSLA
LSADGKTLYVSVKQKSTREQEATQPDDVIRIAL

Sequences:

>Translated_353_residues
MHLRHLFSPRLRGSLLLGSLLVASSFSTLAAEDMLRKAVGKGAYEMAWSQQENALWLATSQSRKLDKGGVVYRLDPVTLE
ITQAIHNDLKPFGATINAATQTLWFGNTINSAVTAIDAKTGDVKGRLVLDARKRTEEVRPLQPRELVADAATNTIYISGV
GKESAIWVVDGETIKLKTTIENTGKMSTGLALDSKAQRLYTTNADGEFITIDTASNKILSRKKLLDDGKEHFFINLSLDT
AGHRAFITDSKATEVLVVDTRNGNILAKIAAPASLAVLYNPTRNEAYVTHRQAGQVSVIDAKTYNVVKTFDTPTYPNSLA
LSADGKTLYVSVKQKSTREQEATQPDDVIRIAL
>Mature_353_residues
MHLRHLFSPRLRGSLLLGSLLVASSFSTLAAEDMLRKAVGKGAYEMAWSQQENALWLATSQSRKLDKGGVVYRLDPVTLE
ITQAIHNDLKPFGATINAATQTLWFGNTINSAVTAIDAKTGDVKGRLVLDARKRTEEVRPLQPRELVADAATNTIYISGV
GKESAIWVVDGETIKLKTTIENTGKMSTGLALDSKAQRLYTTNADGEFITIDTASNKILSRKKLLDDGKEHFFINLSLDT
AGHRAFITDSKATEVLVVDTRNGNILAKIAAPASLAVLYNPTRNEAYVTHRQAGQVSVIDAKTYNVVKTFDTPTYPNSLA
LSADGKTLYVSVKQKSTREQEATQPDDVIRIAL

Specific function: Unknown

COG id: COG3391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787724, Length=353, Percent_Identity=89.2351274787535, Blast_Score=614, Evalue=1e-177,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YNCE_SALTI (Q8Z740)

Other databases:

- EMBL:   AL627270
- EMBL:   AE014613
- RefSeq:   NP_455910.1
- RefSeq:   NP_805282.1
- ProteinModelPortal:   Q8Z740
- GeneID:   1070944
- GeneID:   1247867
- GenomeReviews:   AE014613_GR
- GenomeReviews:   AL513382_GR
- KEGG:   stt:t1496
- KEGG:   sty:STY1479
- HOGENOM:   HBG677534
- OMA:   SREKEAT
- ProtClustDB:   CLSK880060
- BioCyc:   SENT209261:T1496-MONOMER
- BioCyc:   SENT220341:STY1479-MONOMER
- InterPro:   IPR011048
- InterPro:   IPR015943
- Gene3D:   G3DSA:2.130.10.10

Pfam domain/function: SSF51004 Cyt_cd1_haem_C

EC number: NA

Molecular weight: Translated: 38520; Mature: 38520

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLRHLFSPRLRGSLLLGSLLVASSFSTLAAEDMLRKAVGKGAYEMAWSQQENALWLATS
CCCHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEC
QSRKLDKGGVVYRLDPVTLEITQAIHNDLKPFGATINAATQTLWFGNTINSAVTAIDAKT
CCCCCCCCCEEEEECCCEEEEHHHHHHCCCCCCCEEECCEEEEEECCCCCHHEEEEECCC
GDVKGRLVLDARKRTEEVRPLQPRELVADAATNTIYISGVGKESAIWVVDGETIKLKTTI
CCCCEEEEEECHHHHHHCCCCCHHHHHHHCCCCEEEEEECCCCCEEEEEECCEEEEEEEE
ENTGKMSTGLALDSKAQRLYTTNADGEFITIDTASNKILSRKKLLDDGKEHFFINLSLDT
CCCCCEECCEEECCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEEEEEC
AGHRAFITDSKATEVLVVDTRNGNILAKIAAPASLAVLYNPTRNEAYVTHRQAGQVSVID
CCCEEEEECCCCCEEEEEECCCCCEEEEEECCEEEEEEECCCCCCEEEEECCCCEEEEEE
AKTYNVVKTFDTPTYPNSLALSADGKTLYVSVKQKSTREQEATQPDDVIRIAL
CCCEEEEEECCCCCCCCCEEEECCCCEEEEEEECCCCCHHHCCCCCCEEEEEC
>Mature Secondary Structure
MHLRHLFSPRLRGSLLLGSLLVASSFSTLAAEDMLRKAVGKGAYEMAWSQQENALWLATS
CCCHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEC
QSRKLDKGGVVYRLDPVTLEITQAIHNDLKPFGATINAATQTLWFGNTINSAVTAIDAKT
CCCCCCCCCEEEEECCCEEEEHHHHHHCCCCCCCEEECCEEEEEECCCCCHHEEEEECCC
GDVKGRLVLDARKRTEEVRPLQPRELVADAATNTIYISGVGKESAIWVVDGETIKLKTTI
CCCCEEEEEECHHHHHHCCCCCHHHHHHHCCCCEEEEEECCCCCEEEEEECCEEEEEEEE
ENTGKMSTGLALDSKAQRLYTTNADGEFITIDTASNKILSRKKLLDDGKEHFFINLSLDT
CCCCCEECCEEECCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEEEEEC
AGHRAFITDSKATEVLVVDTRNGNILAKIAAPASLAVLYNPTRNEAYVTHRQAGQVSVID
CCCEEEEECCCCCEEEEEECCCCCEEEEEECCEEEEEEECCCCCCEEEEECCCCEEEEEE
AKTYNVVKTFDTPTYPNSLALSADGKTLYVSVKQKSTREQEATQPDDVIRIAL
CCCEEEEEECCCCCCCCCEEEECCCCEEEEEEECCCCCHHHCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504