| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is mlc [H]
Identifier: 29141862
GI number: 29141862
Start: 1453593
End: 1454753
Strand: Direct
Name: mlc [H]
Synonym: t1409
Alternate gene names: 29141862
Gene position: 1453593-1454753 (Clockwise)
Preceding gene: 29141861
Following gene: 29141863
Centisome position: 30.33
GC content: 51.68
Gene sequence:
>1161_bases GTGTATCGCCTGATTGATCAGCTCGGACCGGTATCGCGAATTGACCTGTCTCGTCTGGCGCAGTTGGCGCCTGCCAGTAT TACGAAAATTGTTCGCGAAATGCTGGAAGCGCATTTGGTTCAGGAACTTGAAATTAAAGAGGCGGGCAGTCGTGGACGTC CCGCCGTCGGGCTGATGGTGGAAACGGAAGCCTGGCACTATTTATCTATTCGTATTAGCCGTGGCGAAATTTTCCTTGCA CTGCGCGATCTTAGCAGCAAACTGGTGGTAGAAGAGTGTCTGGCGCTGCCGTTAAACGAAGCTACGCCGTTGCTTGAGCG AATTATTACGCACGTTGATCGGTTTTTTACCCGCCATCAGCAGAAACTGGAGCGTTTGACCTCCATTGCCATTACGTTAC CGGGCATTATCGATACCGAAAACGGTGTTGTGCACCGGATGCCGTATTACGAAGATGTCAAAGAGATGCCTTTGGGAGAT GCGCTGGAGCGGCACACCGGCGTACCGGTTTACATTCAGCATGATATTAGCGCCTGGACGATGGCAGAGGCGCTTTTTGG CGCCTCACGCGGCGCGCGCGACGTTATCCAGGTGGTGATTGATCATAATGTGGGGGCGGGCGTTATCACCGACGGTCATT TGCTTCATGCGGGCAGTAGCAGTCTGGTAGAGATTGGGCATACCCAGGTCAATCCTTATGGTAAGCGCTGTTATTGCGGT AATCATGGCTGTCTGGAGACCATCGCCAGCGTCGATAGTGTGCTGGAACTTACGCAGCTTCGGCTTAATCAGTCGATAAG TTCAATGTTGCATGGCCAGCCGTTAACGGTAGATTCGCTGTGTCAGGCGGCGATGCAGGGAGATCTATTAGCAAAAGATA TTATTAGCGGCGTTGGCGCGCATGTCGGACGCATTCTGGCTATCATGGTGAATTTATTTAATCCGCAAAAAATTCTTATT GGTTCGCCGCTAAGTAAAGCGGCTGATATTCTTTTTCCGGCCATTGCTGACAGTATCCGTCAGCAGGCGCTGCCCGCCTA CAGTAGGAATACGGTAGTGGAAAGCACGCAGTTTACCAACCAGAGCACGATGGCCGGGGCGGCGTTGGTAAAAGACGCGA TGTATAACGGCTCTTTGTTGATTCGTCTATTACAGGGTTAA
Upstream 100 bases:
>100_bases CACAGATTATTTCGGAGCGCGAAAATAAAGGGAGTGAGCGGTGGTTGCTGATAGTCAGCCTGGGCATATCGATCAAATTA AGCAGACCAATGCTGGCGCA
Downstream 100 bases:
>100_bases CATTTTTTAACTGTTGTACAAAAATTTGCGCTAACTCAAGCTGATTGCCCTTGCCATATCTTAGACTTTCTCCACTGTAT TATTTTCCTGGCTTATATTT
Product: regulatory protein
Products: NA
Alternate protein names: Making large colonies protein [H]
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MYRLIDQLGPVSRIDLSRLAQLAPASITKIVREMLEAHLVQELEIKEAGSRGRPAVGLMVETEAWHYLSIRISRGEIFLA LRDLSSKLVVEECLALPLNEATPLLERIITHVDRFFTRHQQKLERLTSIAITLPGIIDTENGVVHRMPYYEDVKEMPLGD ALERHTGVPVYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSSSLVEIGHTQVNPYGKRCYCG NHGCLETIASVDSVLELTQLRLNQSISSMLHGQPLTVDSLCQAAMQGDLLAKDIISGVGAHVGRILAIMVNLFNPQKILI GSPLSKAADILFPAIADSIRQQALPAYSRNTVVESTQFTNQSTMAGAALVKDAMYNGSLLIRLLQG
Sequences:
>Translated_386_residues MYRLIDQLGPVSRIDLSRLAQLAPASITKIVREMLEAHLVQELEIKEAGSRGRPAVGLMVETEAWHYLSIRISRGEIFLA LRDLSSKLVVEECLALPLNEATPLLERIITHVDRFFTRHQQKLERLTSIAITLPGIIDTENGVVHRMPYYEDVKEMPLGD ALERHTGVPVYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSSSLVEIGHTQVNPYGKRCYCG NHGCLETIASVDSVLELTQLRLNQSISSMLHGQPLTVDSLCQAAMQGDLLAKDIISGVGAHVGRILAIMVNLFNPQKILI GSPLSKAADILFPAIADSIRQQALPAYSRNTVVESTQFTNQSTMAGAALVKDAMYNGSLLIRLLQG >Mature_386_residues MYRLIDQLGPVSRIDLSRLAQLAPASITKIVREMLEAHLVQELEIKEAGSRGRPAVGLMVETEAWHYLSIRISRGEIFLA LRDLSSKLVVEECLALPLNEATPLLERIITHVDRFFTRHQQKLERLTSIAITLPGIIDTENGVVHRMPYYEDVKEMPLGD ALERHTGVPVYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSSSLVEIGHTQVNPYGKRCYCG NHGCLETIASVDSVLELTQLRLNQSISSMLHGQPLTVDSLCQAAMQGDLLAKDIISGVGAHVGRILAIMVNLFNPQKILI GSPLSKAADILFPAIADSIRQQALPAYSRNTVVESTQFTNQSTMAGAALVKDAMYNGSLLIRLLQG
Specific function: Transcriptional repressor that regulates the expression of proteins that are part of the phosphotransferase system for sugar uptake. Regulates the expression of malT [H]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Homo sapiens, GI190014632, Length=227, Percent_Identity=26.431718061674, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI298566325, Length=227, Percent_Identity=26.431718061674, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI4885285, Length=227, Percent_Identity=26.431718061674, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI298566315, Length=227, Percent_Identity=26.431718061674, Blast_Score=70, Evalue=4e-12, Organism=Escherichia coli, GI1787878, Length=386, Percent_Identity=90.4145077720207, Blast_Score=723, Evalue=0.0, Organism=Escherichia coli, GI1786891, Length=385, Percent_Identity=39.7402597402597, Blast_Score=295, Evalue=4e-81, Organism=Escherichia coli, GI87082127, Length=309, Percent_Identity=24.2718446601942, Blast_Score=92, Evalue=7e-20, Organism=Escherichia coli, GI87081733, Length=302, Percent_Identity=24.5033112582781, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 - InterPro: IPR011991 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: NA
Molecular weight: Translated: 42186; Mature: 42186
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRLIDQLGPVSRIDLSRLAQLAPASITKIVREMLEAHLVQELEIKEAGSRGRPAVGLMV CCCHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE ETEAWHYLSIRISRGEIFLALRDLSSKLVVEECLALPLNEATPLLERIITHVDRFFTRHQ ECCCEEEEEEEEECCEEEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH QKLERLTSIAITLPGIIDTENGVVHRMPYYEDVKEMPLGDALERHTGVPVYIQHDISAWT HHHHHHHHHHEECCCEEECCCCCEEECCCHHHHHHCCCCHHHHHHCCCCEEEECCCHHHH MAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSSSLVEIGHTQVNPYGKRCYCG HHHHHHHCCCCHHHHHHHHHHCCCCCCEEECCEEEECCCCCCEECCCCCCCCCCCEEEEC NHGCLETIASVDSVLELTQLRLNQSISSMLHGQPLTVDSLCQAAMQGDLLAKDIISGVGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH HVGRILAIMVNLFNPQKILIGSPLSKAADILFPAIADSIRQQALPAYSRNTVVESTQFTN HHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHCCC QSTMAGAALVKDAMYNGSLLIRLLQG CHHHHHHHHHHHHHCCCHHHHEEECC >Mature Secondary Structure MYRLIDQLGPVSRIDLSRLAQLAPASITKIVREMLEAHLVQELEIKEAGSRGRPAVGLMV CCCHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE ETEAWHYLSIRISRGEIFLALRDLSSKLVVEECLALPLNEATPLLERIITHVDRFFTRHQ ECCCEEEEEEEEECCEEEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH QKLERLTSIAITLPGIIDTENGVVHRMPYYEDVKEMPLGDALERHTGVPVYIQHDISAWT HHHHHHHHHHEECCCEEECCCCCEEECCCHHHHHHCCCCHHHHHHCCCCEEEECCCHHHH MAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSSSLVEIGHTQVNPYGKRCYCG HHHHHHHCCCCHHHHHHHHHHCCCCCCEEECCEEEECCCCCCEECCCCCCCCCCCEEEEC NHGCLETIASVDSVLELTQLRLNQSISSMLHGQPLTVDSLCQAAMQGDLLAKDIISGVGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH HVGRILAIMVNLFNPQKILIGSPLSKAADILFPAIADSIRQQALPAYSRNTVVESTQFTN HHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHCCC QSTMAGAALVKDAMYNGSLLIRLLQG CHHHHHHHHHHHHHCCCHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7766024; 9097039; 9278503 [H]