| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is tus [H]
Identifier: 29141795
GI number: 29141795
Start: 1399392
End: 1400321
Strand: Reverse
Name: tus [H]
Synonym: t1338
Alternate gene names: 29141795
Gene position: 1400321-1399392 (Counterclockwise)
Preceding gene: 29141796
Following gene: 29141792
Centisome position: 29.22
GC content: 53.12
Gene sequence:
>930_bases ATGTCCCGCTACGATCTCGTTGAACGCCTGAATGGCACTTTTCGCCAGATAGAACAACACCTGGCGGCGCTGTCGGATAA TCTACAGCAGCATTCGCTACTTATCGCTAGTGTCTTTTCACTGCCGCAGGTGACCAAAGAGGCGGAACATGCGCCGCTGG ACACTATCGAGGTCACGCAACATCTGGGGAAAGAGGCCGAAGCGCTGGCGCTACGTCACTATCGCCATTTGTTTATTCAA CAGCAGTCCGAAAACCGCAGCAGTAAAGCCGCCGTCCGCCTGCCTGGCGTTTTATGCTATCAAGTGGATAATGCGACACA GTTAGATCTGGAAAATCAGGTACAGCGCATTAACCAGTTGAAAACCACCTTCGAGCAGATGGTTACGGTAGAGTCCGGTC TTCCCTCAGCGGCACGTTTTGAGTGGGTGCATCGGCATCTACCCGGCTTAATTACGCTGAACGCTTACCGCACGCTGACG CTTATCAATAACCCCGCCACCATACGTTTCGGTTGGGCAAATAAACATATTATTAAAAATTTAAGCCGGGATGAGGTTCT GAGCCAGTTGAAAAAAAGCCTCGCGTCGCCGCGCAGCGTCCCGCCGTGGACGCGCGAACAATGGCAATTCAAGCTGGAAC GGGAATATCAGGATATCGCTGCCTTACCGCAGCAGGCCAAACTCAAGATTAAGCGCCCGGTTAAGGTACAGCCGATCGCC CGCATCTGGTATAAAGGCCAGCAGAAACAGGTGCAACACGCCTGCCCCTCGCCGATTATCGCATTAATCAACACGGACAA CGGCGCTGGCGTGCCGGATATTGGCGGGCTGGAAAACTATGACGCCGATAATATTCAGCACCGTTTTAAACCACAGGCGC AGCCGCTGCGACTGATTATTCCGCGACTGCACCTGTATGTGGCGGATTAA
Upstream 100 bases:
>100_bases GATGCCCGACATGACCGCGGCCTGACGTATTTTGCACGCTGGTTGAGCCGCGGGAATTGTGCTATACAGATAGTATGTTG TAACTAAAGTGAGTGATACC
Downstream 100 bases:
>100_bases CGTCCCGGCGTCATACTGCCAACCATTAACTCCGGACGTACCCAGGCGTCGAACTCCGCGTCGCTAAGGTATCCTAATGC CACGGCTGAGGCTTTGAGCG
Product: DNA replication terminus site-binding protein
Products: NA
Alternate protein names: Ter-binding protein [H]
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MSRYDLVERLNGTFRQIEQHLAALSDNLQQHSLLIASVFSLPQVTKEAEHAPLDTIEVTQHLGKEAEALALRHYRHLFIQ QQSENRSSKAAVRLPGVLCYQVDNATQLDLENQVQRINQLKTTFEQMVTVESGLPSAARFEWVHRHLPGLITLNAYRTLT LINNPATIRFGWANKHIIKNLSRDEVLSQLKKSLASPRSVPPWTREQWQFKLEREYQDIAALPQQAKLKIKRPVKVQPIA RIWYKGQQKQVQHACPSPIIALINTDNGAGVPDIGGLENYDADNIQHRFKPQAQPLRLIIPRLHLYVAD
Sequences:
>Translated_309_residues MSRYDLVERLNGTFRQIEQHLAALSDNLQQHSLLIASVFSLPQVTKEAEHAPLDTIEVTQHLGKEAEALALRHYRHLFIQ QQSENRSSKAAVRLPGVLCYQVDNATQLDLENQVQRINQLKTTFEQMVTVESGLPSAARFEWVHRHLPGLITLNAYRTLT LINNPATIRFGWANKHIIKNLSRDEVLSQLKKSLASPRSVPPWTREQWQFKLEREYQDIAALPQQAKLKIKRPVKVQPIA RIWYKGQQKQVQHACPSPIIALINTDNGAGVPDIGGLENYDADNIQHRFKPQAQPLRLIIPRLHLYVAD >Mature_308_residues SRYDLVERLNGTFRQIEQHLAALSDNLQQHSLLIASVFSLPQVTKEAEHAPLDTIEVTQHLGKEAEALALRHYRHLFIQQ QSENRSSKAAVRLPGVLCYQVDNATQLDLENQVQRINQLKTTFEQMVTVESGLPSAARFEWVHRHLPGLITLNAYRTLTL INNPATIRFGWANKHIIKNLSRDEVLSQLKKSLASPRSVPPWTREQWQFKLEREYQDIAALPQQAKLKIKRPVKVQPIAR IWYKGQQKQVQHACPSPIIALINTDNGAGVPDIGGLENYDADNIQHRFKPQAQPLRLIIPRLHLYVAD
Specific function: Trans-acting protein required for termination of DNA replication. Binds to DNA replication terminator sequences (terA to terF) to prevent the passage of replication forks. The termination efficiency will be affected by the affinity of this protein for the
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tus family [H]
Homologues:
Organism=Escherichia coli, GI1787895, Length=309, Percent_Identity=79.6116504854369, Blast_Score=521, Evalue=1e-149,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008865 [H]
Pfam domain/function: PF05472 Ter [H]
EC number: NA
Molecular weight: Translated: 35332; Mature: 35201
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRYDLVERLNGTFRQIEQHLAALSDNLQQHSLLIASVFSLPQVTKEAEHAPLDTIEVTQ CCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH HLGKEAEALALRHYRHLFIQQQSENRSSKAAVRLPGVLCYQVDNATQLDLENQVQRINQL HCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEEECCCCCCCHHHHHHHHHHH KTTFEQMVTVESGLPSAARFEWVHRHLPGLITLNAYRTLTLINNPATIRFGWANKHIIKN HHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECEEEEEEECCCCEEEECCCCHHHHHC LSRDEVLSQLKKSLASPRSVPPWTREQWQFKLEREYQDIAALPQQAKLKIKRPVKVQPIA CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCEEECCCCCCCHHH RIWYKGQQKQVQHACPSPIIALINTDNGAGVPDIGGLENYDADNIQHRFKPQAQPLRLII HHHHCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHE PRLHLYVAD EEHEEEECC >Mature Secondary Structure SRYDLVERLNGTFRQIEQHLAALSDNLQQHSLLIASVFSLPQVTKEAEHAPLDTIEVTQ CHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH HLGKEAEALALRHYRHLFIQQQSENRSSKAAVRLPGVLCYQVDNATQLDLENQVQRINQL HCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEEECCCCCCCHHHHHHHHHHH KTTFEQMVTVESGLPSAARFEWVHRHLPGLITLNAYRTLTLINNPATIRFGWANKHIIKN HHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECEEEEEEECCCCEEEECCCCHHHHHC LSRDEVLSQLKKSLASPRSVPPWTREQWQFKLEREYQDIAALPQQAKLKIKRPVKVQPIA CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCEEECCCCCCCHHH RIWYKGQQKQVQHACPSPIIALINTDNGAGVPDIGGLENYDADNIQHRFKPQAQPLRLII HHHHCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHE PRLHLYVAD EEHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA