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The map label for this gene is cnu

Identifier: 29141788

GI number: 29141788

Start: 1389524

End: 1389739

Strand: Reverse

Name: cnu

Synonym: t1329

Alternate gene names: 29141788

Gene position: 1389739-1389524 (Counterclockwise)

Preceding gene: 29141790

Following gene: 29141787

Centisome position: 29.0

GC content: 46.3

Gene sequence:

>216_bases
ATGACTGTTCAGGATTATCTATTAAAATTCCGCAAAATTAGTTCGCTCGAAAGTCTGGAAAAACTGTTCGACCACCTTAA
CTATACCCTTACTGATGACATGGACATCGTTAATATGTATCGCGCTGCAGATCACCGCCGTGCCGAGCTGGTTTCCGGAG
GACGCCTGTTTGATGTAGGTCAGGTTCCGCAATCCGTCTGGCGCTATGTGCAATAA

Upstream 100 bases:

>100_bases
CTTTTTACCTGCACCCCTGACCTCTCACTGGTGCAATTTTGTTTATTTTTTTATCAGTGACTACTCCGTTGGCATTATAT
TTAATATGGATCAACTTTAT

Downstream 100 bases:

>100_bases
AGAAAGTAGCGTTTAACATCAAAAACCTTATAATATTTGCCCCAAAATGAGCGGCATGACCGTTAACGCGCGTAACCCCG
GAGAAGATATGACTACAACA

Product: oriC-binding nucleoid-associated protein

Products: NA

Alternate protein names: H-NS/stpA-binding protein 2

Number of amino acids: Translated: 71; Mature: 70

Protein sequence:

>71_residues
MTVQDYLLKFRKISSLESLEKLFDHLNYTLTDDMDIVNMYRAADHRRAELVSGGRLFDVGQVPQSVWRYVQ

Sequences:

>Translated_71_residues
MTVQDYLLKFRKISSLESLEKLFDHLNYTLTDDMDIVNMYRAADHRRAELVSGGRLFDVGQVPQSVWRYVQ
>Mature_70_residues
TVQDYLLKFRKISSLESLEKLFDHLNYTLTDDMDIVNMYRAADHRRAELVSGGRLFDVGQVPQSVWRYVQ

Specific function: The complex formed with H-NS binds to the specific 26-bp cnb site in the origin of replication oriC

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hha/ymoA/cnu family

Homologues:

Organism=Escherichia coli, GI1787912, Length=71, Percent_Identity=88.7323943661972, Blast_Score=136, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CNU_SALCH (Q57PH6)

Other databases:

- EMBL:   AE017220
- ProteinModelPortal:   Q57PH6
- SMR:   Q57PH6
- PRIDE:   Q57PH6
- GenomeReviews:   AE017220_GR
- KEGG:   sec:SC1479
- HOGENOM:   HBG472615
- OMA:   IINMYRA
- ProtClustDB:   PRK10391
- BioCyc:   SENT321314:SCH_1479-MONOMER
- InterPro:   IPR007985
- Gene3D:   G3DSA:1.20.1280.40

Pfam domain/function: PF05321 HHA; SSF68989 Haemolysin_expr_modulating

EC number: NA

Molecular weight: Translated: 8381; Mature: 8249

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVQDYLLKFRKISSLESLEKLFDHLNYTLTDDMDIVNMYRAADHRRAELVSGGRLFDVG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECHH
QVPQSVWRYVQ
HHHHHHHHHCC
>Mature Secondary Structure 
TVQDYLLKFRKISSLESLEKLFDHLNYTLTDDMDIVNMYRAADHRRAELVSGGRLFDVG
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECHH
QVPQSVWRYVQ
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA