| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is yejK [C]
Identifier: 29141138
GI number: 29141138
Start: 709846
End: 710853
Strand: Direct
Name: yejK [C]
Synonym: t0628
Alternate gene names: 29141138
Gene position: 709846-710853 (Clockwise)
Preceding gene: 29141135
Following gene: 29141139
Centisome position: 14.81
GC content: 53.97
Gene sequence:
>1008_bases ATGAGTCTGGATATCAACCAGATTGCCCTGCACCAGCTTATCAAGCGCGATGAGCAAAATCTTGAGCTGGTCTTGCGCGA TTCATTGCTGGAGCCGACAACCACCGTTGTCGAGATGGTGGCTGAACTGCATCGGGTCTATAGCGCCAAGAATAAGGCGT ATGGCCTGTTTAATGAAGAGAGTGAACTGGCGCAAGCGCTGCGGTTGCAACGTCAGGGGGAAGAAGATTTTCTTGCCTTT AGCCGGGCGGCGACCGGACGCCTGCGTGACGAACTGGCGAAATATCCCTTTGCGGACGGCGGCATTGTATTGTTCTGCCA TTATCGTTACCTGGCGGTGGAGTATCTGCTGGTTACGGTACTGAACAACCTGAGCAGTATGCGGGTCAATGAAAATCTGG ACATTAACCCGACGCATTATCTTGATATCAACCATGCGGATATCGTGGCGCGTATCGATCTTACCGAGTGGGAAACTAAT CCGCAATCGACCCGCTACCTGACGTTCCTGAAAGGTCGGGTAGGGCGCAAGGTCGCTGACTTCTTTATGGATTTCCTCGG CGCCAGCGAAGGGTTGAACGCCAAAGCGCAGAATCGCGGCCTGTTGCAGGCAGTGGATGATTTCACCGCAGAAGCGCAGT TGGATAAAGCAGAACGTCAGAACGTGCGTCAGCAGGTGTACAGCTACTGCAACGAGCAGTTACAAGCCGGGGAAGAGATT GAGCTGGAATCGCTGTCTAAAGAGCTTTCCGGCGTCAGTGAAGTCAGCTTCAGCGAATTTACCGCCGAAAAAGGCTATGA GCTGGAAGAGAGCTTCCCGGCAGATCGCAGTACGCTACGCCAGTTAACCAAATATGCCGGCAGCGGCGGCGGGTTAACGA TTAACTTTGATGCGATGCTACTGGGCGAGCGGATTTTCTGGGACCCGGCGACCGATACCCTGACTATCAAAGGGACGCCG CCGAATTTGCGCGATCAGTTGCAGCGACGCACGTCGGGCGGGAAATAA
Upstream 100 bases:
>100_bases TCATTCGCGTTACGGATAACGCCTGAAATGACAGGGCGATTGCTTGCGTCTTCCGGCAGGCGGTGGTTGAATACCGCCCG GTCTTAAAGGAGAGTTTATC
Downstream 100 bases:
>100_bases AGGCATACGACATAAAAGGACGCCGTAGTGAGTAAAGGAATACGTCAGAGGCCGCCTGTTAATTTCAGTTTATTTCGGCA GGTTTTGTATGCGCACATTG
Product: nucleoid-associated protein NdpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTTTVVEMVAELHRVYSAKNKAYGLFNEESELAQALRLQRQGEEDFLAF SRAATGRLRDELAKYPFADGGIVLFCHYRYLAVEYLLVTVLNNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETN PQSTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEI ELESLSKELSGVSEVSFSEFTAEKGYELEESFPADRSTLRQLTKYAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTP PNLRDQLQRRTSGGK
Sequences:
>Translated_335_residues MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTTTVVEMVAELHRVYSAKNKAYGLFNEESELAQALRLQRQGEEDFLAF SRAATGRLRDELAKYPFADGGIVLFCHYRYLAVEYLLVTVLNNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETN PQSTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEI ELESLSKELSGVSEVSFSEFTAEKGYELEESFPADRSTLRQLTKYAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTP PNLRDQLQRRTSGGK >Mature_334_residues SLDINQIALHQLIKRDEQNLELVLRDSLLEPTTTVVEMVAELHRVYSAKNKAYGLFNEESELAQALRLQRQGEEDFLAFS RAATGRLRDELAKYPFADGGIVLFCHYRYLAVEYLLVTVLNNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNP QSTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEIE LESLSKELSGVSEVSFSEFTAEKGYELEESFPADRSTLRQLTKYAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPP NLRDQLQRRTSGGK
Specific function: Unknown
COG id: COG3081
COG function: function code R; Nucleoid-associated protein
Gene ontology:
Cell location: Cytoplasm, nucleoid [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the YejK family [H]
Homologues:
Organism=Escherichia coli, GI1788513, Length=334, Percent_Identity=96.4071856287425, Blast_Score=665, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007358 [H]
Pfam domain/function: PF04245 NA37 [H]
EC number: NA
Molecular weight: Translated: 37877; Mature: 37746
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTTTVVEMVAELHRVYSAKNKAYGLFNEE CCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCH SELAQALRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGIVLFCHYRYLAVEYLLVTV HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHH LNNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPQSTRYLTFLKGRVGRKVAD HHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEECHHCCCCCCCHHHHHHHHHHHHHHHHH FFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEI HHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ELESLSKELSGVSEVSFSEFTAEKGYELEESFPADRSTLRQLTKYAGSGGGLTINFDAML CHHHHHHHHCCHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHCCCCCCEEEEEHHHH LGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGGK HCCEEEECCCCCEEEEECCCCCHHHHHHHHHCCCC >Mature Secondary Structure SLDINQIALHQLIKRDEQNLELVLRDSLLEPTTTVVEMVAELHRVYSAKNKAYGLFNEE CCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCH SELAQALRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGIVLFCHYRYLAVEYLLVTV HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHH LNNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPQSTRYLTFLKGRVGRKVAD HHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEECHHCCCCCCCHHHHHHHHHHHHHHHHH FFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEI HHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ELESLSKELSGVSEVSFSEFTAEKGYELEESFPADRSTLRQLTKYAGSGGGLTINFDAML CHHHHHHHHCCHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHCCCCCCEEEEEHHHH LGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGGK HCCEEEECCCCCEEEEECCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA