| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is napA [H]
Identifier: 29141119
GI number: 29141119
Start: 688858
End: 691344
Strand: Direct
Name: napA [H]
Synonym: t0605
Alternate gene names: 29141119
Gene position: 688858-691344 (Clockwise)
Preceding gene: 29141118
Following gene: 29141120
Centisome position: 14.38
GC content: 56.94
Gene sequence:
>2487_bases ATGAAACTCAGTCGTCGTAGCTTTATGAAAGCTAACGCCGTTGCGGCCGCTGCGGCGGCTGCCGGTCTGAGCGTGCCGGG CGTCGCCCGCGCCGTTGTCGGGCAGCAGGAAGCTATCAAATGGGATAAAGCGCCGTGCCGTTTTTGCGGAACGGGTTGCG GTGTGTTGGTGGGAACGCAGCAGGGCCGTGTGGTCGCCTGCCAGGGCGACCCCGACGCGCCGGTCAACCGTGGTCTGAAC TGCATTAAAGGCTACTTCCTGCCCAAAATCATGTACGGTAAAGATCGTCTGACGCAGCCGATGCTGCGCATGAAAGACGG CAGCTATCACAAAGACGGCGAGTTTACGCCGGTGAGCTGGGAACAGGCCTTCGATGTGATGGAAGAGAAGTTTAAAACCG CCCTGAAAGAGAAAGGACCAGAAGCGATCGGCATGTTTGGATCGGGTCAATGGACCATCTGGGAAGGCTATGCCGCCGCG AAACTGTTCAAGGCTGGTTTCCGCTCTAACAACATCGACCCGAACGCGCGTCACTGCATGGCCTCGGCGGTGGTGGGCTT TATGCGCACCTTTGGCATGGATGAACCGATGGGCTGCTACGACGATATTGAGCAGGCCGATGCGTTTGTGCTGTGGGGGT CCAACATGGCGGAGATGCACCCGATTTTATGGTCGCGCATCACTAACCGCCGTTTGTCCGACCCGAATGTGAAAGTTGCT GTCCTCTCCACCTTCCAGCACCGTAGCTTTGAGCTGGCGGACAACGGTATTGTCTTTACCCCGCAAAGCGATCTGGTGAT CCTTAACTATATCGCGAATTACATTATTCAGAACAACGCGGTAAATCAGGATTTCTTCACAAAGCATGTGAATCTGCGTA AAGGGGCGACGGATATCGGCTACGGCTTACGCCCGACGCACCCGCTGGAAAAAGCGGCGAAGAATCCGGGCTCCGACGCT TCCGAGCCGATGAGCTTCGACGAGTATAAAGCCTTCGTGGCGGAATATACGTTGGACAAGACTGCTGAAATGACCGGCGT GCCGAAAGATCAACTGGAACAGTTGGCACAGCTCTACGCCGATCCGAATAAGCGCGTGATCTCTTACTGGACGATGGGTT TTAACCAGCATACCCGCGGCGTGTGGGCGAATAACCTGGTTTACAACCTCCATCTGCTGACCGGAAAAATCTCCCAGCCT GGCTGCGGTCCTTTCTCGCTGACCGGCCAGCCTTCCGCCTGCGGTACGGCGCGTGAAGTGGGAACCTTCTCACACCGTCT GCCCGCAGACATGGTCGTGACGAACGAAAAACACCGTGATATCTGCGAAAAACACTGGCAGATCCCCGCTGGCACTATCC CGGCAAAAGTGGGTTTACATGCGGTGGCGCAGGATCGCGCGTTGAAAGACGGCAAGCTGAACGTCTACTGGGTAATGTGT AATAACAATATGCAGGCCGGGCCGAACATCAATGAAGATCGGATGCCGGGCTGGCGCGATCCGCGTAACTTTATCATTGT CTCCGATCCTTACCCGACGGTGAGCGCGCTGTCTGCTGATCTGATCCTGCCGACCGCCATGTGGGTTGAGAAAGAAGGCG CTTACGGCAACGCCGAACGCCGCACGCAGTTCTGGCGTCAGCAAATTAAAGCGCCGGGCGAAGCCAAATCCGACCTCTGG CAACTGGTGCAGTTCTCCCGTCGTTTTAAAACCGAGGAGGTCTGGCCGGAGGCGTTGTTGGCCCAGAAGCCGGAGCTGCG CGGCAAAACGCTGTATGACGTTCTATTCGCCACGCCTGCGGTCAGCAAATTCCCGCTGAGCGAGCTGAAAGAAGATCAGT TAAACGATGAGTCTCGTGAGCTGGGCTTCTATCTGCAAAAAGGGCTATTTGAAGAATACGCCTGGTTTGGACGTGGCCAC GGTCACGATCTGGCGCCGTTCGACGATTACCACAACGCGCGCGGTCTGCGCTGGCCGGTCGTCGAAGGCAAAGAGACGCA ATGGCGTTACAGCGAAGGCAACGACCCGTATGTAAAAGCGGGGGAAGGGTACAAATTCTACGGTAAACCGGATGGCAAAG CGGTGATCTTCGCGCTGCCATTTGAACCCGCGGCGGAGTCGCCGGACAACGAGTACGATCTGTGGCTTTCCACCGGTCGC GTACTGGAACACTGGCATACCGGCAGTATGACGCGCCGCGTGCCTGAATTGCATCGCGCCTTCCCGGAAGCGGTGGTCTT TATTCACCCGCTGGATGCGAAAGCGCGCGATCTGCGTCGTGGGGATAAGGTTAAAGTGTCGTCCCGCCGCGGCGAAGTGA TTTCGATTGTCGAAACGCGTGGACGTAACCGTCCGCCGCAGGGACTGGTGTATATGCCGTTCTTCGATGCCGCTCAGCTA GTGAACAACCTGACGCTGGATGCGACGGACCCGCTCTCTAAAGAGACGGACTTCAAGAAGTGCGCCGTTAAGCTGGCGAA GGTGTAA
Upstream 100 bases:
>100_bases AAACGCTGATGCAAACAATTGAGTCAGTACGCAATGTCGAGGGCGTGCTGGCGGTGTCGCTGGTTTATCACCAGCAGGAT GAGCAAGGTGAGGAAACACC
Downstream 100 bases:
>100_bases CGCGTTATGTCCCGTACAGCGAAACCCCAAAATGGCCGCCGCCGCTTTCTGCGTGATGTTGTGCGCACTGCGGGCGGGCT GGCGGCGGTTGGCGTGGCGC
Product: nitrate reductase catalytic subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 828; Mature: 828
Protein sequence:
>828_residues MKLSRRSFMKANAVAAAAAAAGLSVPGVARAVVGQQEAIKWDKAPCRFCGTGCGVLVGTQQGRVVACQGDPDAPVNRGLN CIKGYFLPKIMYGKDRLTQPMLRMKDGSYHKDGEFTPVSWEQAFDVMEEKFKTALKEKGPEAIGMFGSGQWTIWEGYAAA KLFKAGFRSNNIDPNARHCMASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGSNMAEMHPILWSRITNRRLSDPNVKVA VLSTFQHRSFELADNGIVFTPQSDLVILNYIANYIIQNNAVNQDFFTKHVNLRKGATDIGYGLRPTHPLEKAAKNPGSDA SEPMSFDEYKAFVAEYTLDKTAEMTGVPKDQLEQLAQLYADPNKRVISYWTMGFNQHTRGVWANNLVYNLHLLTGKISQP GCGPFSLTGQPSACGTAREVGTFSHRLPADMVVTNEKHRDICEKHWQIPAGTIPAKVGLHAVAQDRALKDGKLNVYWVMC NNNMQAGPNINEDRMPGWRDPRNFIIVSDPYPTVSALSADLILPTAMWVEKEGAYGNAERRTQFWRQQIKAPGEAKSDLW QLVQFSRRFKTEEVWPEALLAQKPELRGKTLYDVLFATPAVSKFPLSELKEDQLNDESRELGFYLQKGLFEEYAWFGRGH GHDLAPFDDYHNARGLRWPVVEGKETQWRYSEGNDPYVKAGEGYKFYGKPDGKAVIFALPFEPAAESPDNEYDLWLSTGR VLEHWHTGSMTRRVPELHRAFPEAVVFIHPLDAKARDLRRGDKVKVSSRRGEVISIVETRGRNRPPQGLVYMPFFDAAQL VNNLTLDATDPLSKETDFKKCAVKLAKV
Sequences:
>Translated_828_residues MKLSRRSFMKANAVAAAAAAAGLSVPGVARAVVGQQEAIKWDKAPCRFCGTGCGVLVGTQQGRVVACQGDPDAPVNRGLN CIKGYFLPKIMYGKDRLTQPMLRMKDGSYHKDGEFTPVSWEQAFDVMEEKFKTALKEKGPEAIGMFGSGQWTIWEGYAAA KLFKAGFRSNNIDPNARHCMASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGSNMAEMHPILWSRITNRRLSDPNVKVA VLSTFQHRSFELADNGIVFTPQSDLVILNYIANYIIQNNAVNQDFFTKHVNLRKGATDIGYGLRPTHPLEKAAKNPGSDA SEPMSFDEYKAFVAEYTLDKTAEMTGVPKDQLEQLAQLYADPNKRVISYWTMGFNQHTRGVWANNLVYNLHLLTGKISQP GCGPFSLTGQPSACGTAREVGTFSHRLPADMVVTNEKHRDICEKHWQIPAGTIPAKVGLHAVAQDRALKDGKLNVYWVMC NNNMQAGPNINEDRMPGWRDPRNFIIVSDPYPTVSALSADLILPTAMWVEKEGAYGNAERRTQFWRQQIKAPGEAKSDLW QLVQFSRRFKTEEVWPEALLAQKPELRGKTLYDVLFATPAVSKFPLSELKEDQLNDESRELGFYLQKGLFEEYAWFGRGH GHDLAPFDDYHNARGLRWPVVEGKETQWRYSEGNDPYVKAGEGYKFYGKPDGKAVIFALPFEPAAESPDNEYDLWLSTGR VLEHWHTGSMTRRVPELHRAFPEAVVFIHPLDAKARDLRRGDKVKVSSRRGEVISIVETRGRNRPPQGLVYMPFFDAAQL VNNLTLDATDPLSKETDFKKCAVKLAKV >Mature_828_residues MKLSRRSFMKANAVAAAAAAAGLSVPGVARAVVGQQEAIKWDKAPCRFCGTGCGVLVGTQQGRVVACQGDPDAPVNRGLN CIKGYFLPKIMYGKDRLTQPMLRMKDGSYHKDGEFTPVSWEQAFDVMEEKFKTALKEKGPEAIGMFGSGQWTIWEGYAAA KLFKAGFRSNNIDPNARHCMASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGSNMAEMHPILWSRITNRRLSDPNVKVA VLSTFQHRSFELADNGIVFTPQSDLVILNYIANYIIQNNAVNQDFFTKHVNLRKGATDIGYGLRPTHPLEKAAKNPGSDA SEPMSFDEYKAFVAEYTLDKTAEMTGVPKDQLEQLAQLYADPNKRVISYWTMGFNQHTRGVWANNLVYNLHLLTGKISQP GCGPFSLTGQPSACGTAREVGTFSHRLPADMVVTNEKHRDICEKHWQIPAGTIPAKVGLHAVAQDRALKDGKLNVYWVMC NNNMQAGPNINEDRMPGWRDPRNFIIVSDPYPTVSALSADLILPTAMWVEKEGAYGNAERRTQFWRQQIKAPGEAKSDLW QLVQFSRRFKTEEVWPEALLAQKPELRGKTLYDVLFATPAVSKFPLSELKEDQLNDESRELGFYLQKGLFEEYAWFGRGH GHDLAPFDDYHNARGLRWPVVEGKETQWRYSEGNDPYVKAGEGYKFYGKPDGKAVIFALPFEPAAESPDNEYDLWLSTGR VLEHWHTGSMTRRVPELHRAFPEAVVFIHPLDAKARDLRRGDKVKVSSRRGEVISIVETRGRNRPPQGLVYMPFFDAAQL VNNLTLDATDPLSKETDFKKCAVKLAKV
Specific function: Catalytic subunit of the periplasmic nitrate reductase (NAP). Only expressed at high levels during aerobic growth. NapAB complex receives electrons from the membrane-anchored tetraheme protein napC, thus allowing electron flow between membrane and peripla
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/napA/narB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788534, Length=828, Percent_Identity=94.2028985507246, Blast_Score=1634, Evalue=0.0, Organism=Escherichia coli, GI3868721, Length=801, Percent_Identity=24.0948813982522, Blast_Score=206, Evalue=5e-54, Organism=Escherichia coli, GI3868720, Length=660, Percent_Identity=23.4848484848485, Blast_Score=126, Evalue=6e-30, Organism=Escherichia coli, GI3868719, Length=660, Percent_Identity=22.8787878787879, Blast_Score=112, Evalue=1e-25, Organism=Escherichia coli, GI1787870, Length=822, Percent_Identity=22.5060827250608, Blast_Score=98, Evalue=2e-21, Organism=Escherichia coli, GI87081797, Length=896, Percent_Identity=22.7678571428571, Blast_Score=98, Evalue=2e-21, Organism=Escherichia coli, GI171474008, Length=428, Percent_Identity=22.8971962616822, Blast_Score=67, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006963 - InterPro: IPR006655 - InterPro: IPR010051 - InterPro: IPR006311 [H]
Pfam domain/function: PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: =1.7.99.4 [H]
Molecular weight: Translated: 92859; Mature: 92859
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: PS00551 MOLYBDOPTERIN_PROK_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSRRSFMKANAVAAAAAAAGLSVPGVARAVVGQQEAIKWDKAPCRFCGTGCGVLVGTQ CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHCCCCCCHHHHCCCCCEEEECC QGRVVACQGDPDAPVNRGLNCIKGYFLPKIMYGKDRLTQPMLRMKDGSYHKDGEFTPVSW CCCEEEECCCCCCHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCH EQAFDVMEEKFKTALKEKGPEAIGMFGSGQWTIWEGYAAAKLFKAGFRSNNIDPNARHCM HHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECCHHHHHHHHHHCCCCCCCCHHHHHH ASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGSNMAEMHPILWSRITNRRLSDPNVKVA HHHHHHHHHHCCCCCCCCCHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEE VLSTFQHRSFELADNGIVFTPQSDLVILNYIANYIIQNNAVNQDFFTKHVNLRKGATDIG EEECCCCCCEEECCCCEEECCCCCEEHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCC YGLRPTHPLEKAAKNPGSDASEPMSFDEYKAFVAEYTLDKTAEMTGVPKDQLEQLAQLYA CCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHC DPNKRVISYWTMGFNQHTRGVWANNLVYNLHLLTGKISQPGCGPFSLTGQPSACGTAREV CCCCEEEEEEEECCCCCCCCEEECCEEEEEEEEECCCCCCCCCCEECCCCCCCCCCHHHH GTFSHRLPADMVVTNEKHRDICEKHWQIPAGTIPAKVGLHAVAQDRALKDGKLNVYWVMC CCHHHCCCCCEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEE NNNMQAGPNINEDRMPGWRDPRNFIIVSDPYPTVSALSADLILPTAMWVEKEGAYGNAER CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHEEECCCCCCCHHH RTQFWRQQIKAPGEAKSDLWQLVQFSRRFKTEEVWPEALLAQKPELRGKTLYDVLFATPA HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHCHHHHHHCCCCCCCCHHHHHHHHCCC VSKFPLSELKEDQLNDESRELGFYLQKGLFEEYAWFGRGHGHDLAPFDDYHNARGLRWPV CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC VEGKETQWRYSEGNDPYVKAGEGYKFYGKPDGKAVIFALPFEPAAESPDNEYDLWLSTGR CCCCCCCEEECCCCCCEEECCCCEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEEECCH VLEHWHTGSMTRRVPELHRAFPEAVVFIHPLDAKARDLRRGDKVKVSSRRGEVISIVETR HHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHCCCCCEEEECCCCCEEEEEECC GRNRPPQGLVYMPFFDAAQLVNNLTLDATDPLSKETDFKKCAVKLAKV CCCCCCCCEEECCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MKLSRRSFMKANAVAAAAAAAGLSVPGVARAVVGQQEAIKWDKAPCRFCGTGCGVLVGTQ CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHCCCCCCHHHHCCCCCEEEECC QGRVVACQGDPDAPVNRGLNCIKGYFLPKIMYGKDRLTQPMLRMKDGSYHKDGEFTPVSW CCCEEEECCCCCCHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCH EQAFDVMEEKFKTALKEKGPEAIGMFGSGQWTIWEGYAAAKLFKAGFRSNNIDPNARHCM HHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECCHHHHHHHHHHCCCCCCCCHHHHHH ASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGSNMAEMHPILWSRITNRRLSDPNVKVA HHHHHHHHHHCCCCCCCCCHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEE VLSTFQHRSFELADNGIVFTPQSDLVILNYIANYIIQNNAVNQDFFTKHVNLRKGATDIG EEECCCCCCEEECCCCEEECCCCCEEHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCC YGLRPTHPLEKAAKNPGSDASEPMSFDEYKAFVAEYTLDKTAEMTGVPKDQLEQLAQLYA CCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHC DPNKRVISYWTMGFNQHTRGVWANNLVYNLHLLTGKISQPGCGPFSLTGQPSACGTAREV CCCCEEEEEEEECCCCCCCCEEECCEEEEEEEEECCCCCCCCCCEECCCCCCCCCCHHHH GTFSHRLPADMVVTNEKHRDICEKHWQIPAGTIPAKVGLHAVAQDRALKDGKLNVYWVMC CCHHHCCCCCEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEE NNNMQAGPNINEDRMPGWRDPRNFIIVSDPYPTVSALSADLILPTAMWVEKEGAYGNAER CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHEEECCCCCCCHHH RTQFWRQQIKAPGEAKSDLWQLVQFSRRFKTEEVWPEALLAQKPELRGKTLYDVLFATPA HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHCHHHHHHCCCCCCCCHHHHHHHHCCC VSKFPLSELKEDQLNDESRELGFYLQKGLFEEYAWFGRGHGHDLAPFDDYHNARGLRWPV CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC VEGKETQWRYSEGNDPYVKAGEGYKFYGKPDGKAVIFALPFEPAAESPDNEYDLWLSTGR CCCCCCCEEECCCCCCEEECCCCEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEEECCH VLEHWHTGSMTRRVPELHRAFPEAVVFIHPLDAKARDLRRGDKVKVSSRRGEVISIVETR HHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHCCCCCEEEECCCCCEEEEEECC GRNRPPQGLVYMPFFDAAQLVNNLTLDATDPLSKETDFKKCAVKLAKV CCCCCCCCEEECCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA