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The map label for this gene is yfcA [H]

Identifier: 29140998

GI number: 29140998

Start: 555979

End: 556788

Strand: Direct

Name: yfcA [H]

Synonym: t0482

Alternate gene names: 29140998

Gene position: 555979-556788 (Clockwise)

Preceding gene: 29140997

Following gene: 29140999

Centisome position: 11.6

GC content: 54.32

Gene sequence:

>810_bases
ATGGACAATTTTTATGATCTGTTTATGGTCTCCCCGCTGCTGCTGGTGGTGCTGTTTTTTGTCGCCGTACTGGCAGGATT
TATCGATTCTATCGCCGGAGGCGGAGGGCTGCTCACTATCCCTGCGCTGATGGCCGCCGGGATGTCGCCGGCAAACGCGT
TGGCGACCAATAAATTACAGGCGTGCGGCGGCTCCCTCTCGTCTTCGCTCTATTTTATTCGCCGTAAAGTGGTAAACCTG
GCCGAGCAAAAGCTCAATATTCTGATGACGTTCATTGGCTCGATGAGCGGCGCGCTGCTGGTGCAGCACGTGCAGGCGGA
TATTTTGCGCCAGATCTTGCCCATCCTGGTGATTTTCATCGGCCTCTATTTTTTATTGATGCCGAAGCTGGGCGAGGAAG
ATCGCCAGCGCCGCCTGTATGGATTACCGTTCGCGCTGATAGCCGGGGGATGCGTCGGGTTTTACGACGGCTTTTTCGGG
CCTGCCGCAGGGTCGTTTTACGCTCTGGCGTTTGTCACCTTATGTGGCTATAACCTGGCGAAATCCACGGCACATGCCAA
AGTGCTTAACGCTACCTCCAACGTTGGCGGCCTGCTGTTATTTATCATCGGCGGCAAAGTGATCTGGGCGACGGGCTTTG
TGATGCTGGTTGGTCAGTTTTTAGGGGCGCGAATGGGGTCGCGTCTGGTGTTGAGCAAAGGCCAAAAGCTTATCAGACCG
ATGATCGTTATTGTCTCGGCGGTGATGAGCGCCAGGTTACTTTATGATAGCCACGGACAGGAGATCCTCCACTGGTTGGG
GATGAATTAA

Upstream 100 bases:

>100_bases
GGTTCGAACCGCCAAAACCTGGCACCACAAAGCCTGAGAAGAAGACACCGCCGCCGTTGCCGCCTTCCTGCCAGGCGCTA
CTGGATGAGCATGTACTCTG

Downstream 100 bases:

>100_bases
TGAACAGTACGCACCATTACGAACAATTAATTGAGATTTTTAACGGCTGCTTTGCCGAAGAATTTAATACCCGTCTGATT
AAAGGCGACGACGAACCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MDNFYDLFMVSPLLLVVLFFVAVLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQACGGSLSSSLYFIRRKVVNL
AEQKLNILMTFIGSMSGALLVQHVQADILRQILPILVIFIGLYFLLMPKLGEEDRQRRLYGLPFALIAGGCVGFYDGFFG
PAAGSFYALAFVTLCGYNLAKSTAHAKVLNATSNVGGLLLFIIGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRP
MIVIVSAVMSARLLYDSHGQEILHWLGMN

Sequences:

>Translated_269_residues
MDNFYDLFMVSPLLLVVLFFVAVLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQACGGSLSSSLYFIRRKVVNL
AEQKLNILMTFIGSMSGALLVQHVQADILRQILPILVIFIGLYFLLMPKLGEEDRQRRLYGLPFALIAGGCVGFYDGFFG
PAAGSFYALAFVTLCGYNLAKSTAHAKVLNATSNVGGLLLFIIGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRP
MIVIVSAVMSARLLYDSHGQEILHWLGMN
>Mature_269_residues
MDNFYDLFMVSPLLLVVLFFVAVLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQACGGSLSSSLYFIRRKVVNL
AEQKLNILMTFIGSMSGALLVQHVQADILRQILPILVIFIGLYFLLMPKLGEEDRQRRLYGLPFALIAGGCVGFYDGFFG
PAAGSFYALAFVTLCGYNLAKSTAHAKVLNATSNVGGLLLFIIGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRP
MIVIVSAVMSARLLYDSHGQEILHWLGMN

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=269, Percent_Identity=90.7063197026022, Blast_Score=473, Evalue=1e-135,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 28859; Mature: 28859

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNFYDLFMVSPLLLVVLFFVAVLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHH
ACGGSLSSSLYFIRRKVVNLAEQKLNILMTFIGSMSGALLVQHVQADILRQILPILVIFI
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLYFLLMPKLGEEDRQRRLYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGYNLA
HHHHHHHCCCCCHHHHHHHHCCCHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
KSTAHAKVLNATSNVGGLLLFIIGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRP
HHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHH
MIVIVSAVMSARLLYDSHGQEILHWLGMN
HHHHHHHHHHHHHHHHCCHHHHHHHHCCC
>Mature Secondary Structure
MDNFYDLFMVSPLLLVVLFFVAVLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHH
ACGGSLSSSLYFIRRKVVNLAEQKLNILMTFIGSMSGALLVQHVQADILRQILPILVIFI
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLYFLLMPKLGEEDRQRRLYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGYNLA
HHHHHHHCCCCCHHHHHHHHCCCHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
KSTAHAKVLNATSNVGGLLLFIIGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRP
HHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHH
MIVIVSAVMSARLLYDSHGQEILHWLGMN
HHHHHHHHHHHHHHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]