| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is imp [H]
Identifier: 29140638
GI number: 29140638
Start: 105605
End: 107959
Strand: Reverse
Name: imp [H]
Synonym: t0096
Alternate gene names: 29140638
Gene position: 107959-105605 (Counterclockwise)
Preceding gene: 29140640
Following gene: 29140637
Centisome position: 2.25
GC content: 52.91
Gene sequence:
>2355_bases ATGAAAAAACGTATTCCCACTCTTCTGGCCACCATGATCGCCAGCGCCCTTTATAGTCATCAGGGGCTGGCAGCCGATCT CGCCTCACAGTGTATGTTGGGCGTGCCGAGCTACGATCGTCCTCTGGTAAAAGGCGATACCAACGATCTGCCGGTTACTA TCAATGCCGATAACGCTAAAGGTAACTACCCGGACGATGCCGTTTTTACCGGCAACGTGGACATTATGCAGGGGAATAGC CGCCTGCAAGCGGATGAAGTGCAGCTTCATCAGAAGCAGGCGGAAGGTCAGCCGGAACCTGTACGCACCGTCGATGCGCT GGGTAATGTGCATTATGATGACAATCAGGTCATCCTTAAAGGGCCGAAGGGCTGGGCGAACCTGAACACCAAAGACACGA ACGTCTGGGAAGGCGATTACCAAATGGTGGGCCGTCAGGGGCGCGGTAAAGCCGATCTCATGAAGCAGCGTGGCGAAAAC CGCTATACCATTCTGGAAAACGGCAGCTTTACCTCCTGTCTGCCTGGCTCCGATACCTGGAGCGTGGTGGGGAGTGAAGT CATCCATGACCGTGAAGAACAGGTTGCGGAGATCTGGAACGCCCGGTTTAAAGTAGGTCCGGTTCCGATCTTTTATAGCC CCTATTTACAGCTACCCGTCGGTGACAAACGTCGCTCAGGTTTCCTGATCCCGAACGCGAAATACACGACCAAGAACTAT TTCGAGTTCTACTTACCGTATTACTGGAACATCGCGCCCAATATGGACGCCACCATCACCCCGCACTATATGCACCGCCG CGGCAATATTATGTGGGAGAACGAATTCCGTTATCTCACGCAGGCCGGCGCCGGGTTGATGGAATTAGATTATCTGCCTT CTGATAAAGTCTACGAGGACGAACATCCCAAAGAGGGCGATAAGCACCGCTGGTTATTCTACTGGCAGCACTCAGGCGTG ATGGATCAGGTGTGGCGTTTTAACGTCGATTACACCAAAGTCAGCGACTCCAGCTACTTTAATGATTTCGACAGTAAGTA CGGTTCCAGTACCGACGGCTACGCAACGCAGAAATTCAGCGTCGGCTACGCCGTACAAAACTTTGACGCTACGGTGTCGA CCAAACAATTCCAGGTCTTTAACGATCAGAACACCAGCAGCTATTCAGCGGAGCCGCAGTTAGACGTTAACTACTACCAT AACGATCTCGGCCCGTTTGATACCCGGATTTACGGTCAGGCGGTGCACTTTGTCAACACCAAAGACAATATGCCGGAAGC GACCCGCGTCCACCTGGAGCCGACCATTAGTCTGCCGCTCTCCAACCGCTGGGGCAGTCTGAACACCGAAGCGAAGCTGA TGGCGACGCACTATCAGCAGACGAATCTGGACTGGTACAACGCCAATAACAGCAAAAAACTGGAAGATTCGGTTAACCGC GTCATGCCGCAGTTTAAAGTCGACGGTAAGCTCGTCTTCGAACGCGATATGGCGATGCTGGCGCCGGGGTATACCCAAAC GCTGGAACCACGCGTGCAGTACCTGTATGTGCCGTACCGCGACCAGAGCGGCATCTATAACTACGATTCTTCTTTGCTGC AATCCGACTATAACGGCCTGTTCCGCGACCGCACTTATGGCGGTCTCGACCGTATTGCTTCCGCCAACCAGGTCACGACC GGCGTCACAACACGCATTTATGATGATGCCGCCGTTGAACGTTTTAACGTTTCTGTTGGTCAAATCTACTATTTCACGGA GTCTCGCACCGGCGATGACAACATTAAATGGGAGAATGACGACAAAACCGGTTCGCTGGTTTGGGCAGGTGACACTTACT GGCGTATTTCAGAACGCTGGGGGCTGCGTAGCGGAGTGCAGTACGATACCCGTCTGGATAGCGTCGCTACCAGCAGCAGC AGCCTCGAATACCGTCGGGATCAGGATCGTCTGGTACAGTTGAACTACCGCTATGCCAGCCCGGAATATATTCAGGCTAC GTTGCCTTCGTATTATTCCACGGCAGAGCAGTATAAAAACGGCATCAACCAGGTGGGCGCGGTGGCAAGTTGGCCGATTG CCGATCGCTGGTCGATTGTCGGCGCGTACTACTTCGATACCAATTCGAGCAAACCTGCAGACCAGATGCTCGGCTTGCAG TACAACTCTTGCTGCTATGCGATCCGCGTCGGATACGAACGTAAGCTGAACGGTTGGGATAACGATAAACAACACGCGAT TTATGATAACGCGATTGGCTTCAACATTGAGCTGCGCGGTTTGAGCTCTAACTACGGCCTCGGCACGCAAGAAATGTTGC GTTCGAACATTCTGCCGTACCAAAGCTCTATGTAA
Upstream 100 bases:
>100_bases AAACGGCAGGATTAACACTGGCGCAGCGAAGATGAGTAAGTTAGGCTGTGACCGTTTGTCACGCGCAACGCTACCGATGA TGGAACAATAAATACAACGT
Downstream 100 bases:
>100_bases TCTGATTGATTTACAACGTAATCCGCATTGCGGTTAATTGAAATGGAAAAAGTATGAAGAACTGGAAAACGCTGCTTCTC GGTATCGCCATGATCGCGAA
Product: organic solvent tolerance protein
Products: NA
Alternate protein names: Organic solvent tolerance protein [H]
Number of amino acids: Translated: 784; Mature: 784
Protein sequence:
>784_residues MKKRIPTLLATMIASALYSHQGLAADLASQCMLGVPSYDRPLVKGDTNDLPVTINADNAKGNYPDDAVFTGNVDIMQGNS RLQADEVQLHQKQAEGQPEPVRTVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGEN RYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTKNY FEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLTQAGAGLMELDYLPSDKVYEDEHPKEGDKHRWLFYWQHSGV MDQVWRFNVDYTKVSDSSYFNDFDSKYGSSTDGYATQKFSVGYAVQNFDATVSTKQFQVFNDQNTSSYSAEPQLDVNYYH NDLGPFDTRIYGQAVHFVNTKDNMPEATRVHLEPTISLPLSNRWGSLNTEAKLMATHYQQTNLDWYNANNSKKLEDSVNR VMPQFKVDGKLVFERDMAMLAPGYTQTLEPRVQYLYVPYRDQSGIYNYDSSLLQSDYNGLFRDRTYGGLDRIASANQVTT GVTTRIYDDAAVERFNVSVGQIYYFTESRTGDDNIKWENDDKTGSLVWAGDTYWRISERWGLRSGVQYDTRLDSVATSSS SLEYRRDQDRLVQLNYRYASPEYIQATLPSYYSTAEQYKNGINQVGAVASWPIADRWSIVGAYYFDTNSSKPADQMLGLQ YNSCCYAIRVGYERKLNGWDNDKQHAIYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQSSM
Sequences:
>Translated_784_residues MKKRIPTLLATMIASALYSHQGLAADLASQCMLGVPSYDRPLVKGDTNDLPVTINADNAKGNYPDDAVFTGNVDIMQGNS RLQADEVQLHQKQAEGQPEPVRTVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGEN RYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTKNY FEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLTQAGAGLMELDYLPSDKVYEDEHPKEGDKHRWLFYWQHSGV MDQVWRFNVDYTKVSDSSYFNDFDSKYGSSTDGYATQKFSVGYAVQNFDATVSTKQFQVFNDQNTSSYSAEPQLDVNYYH NDLGPFDTRIYGQAVHFVNTKDNMPEATRVHLEPTISLPLSNRWGSLNTEAKLMATHYQQTNLDWYNANNSKKLEDSVNR VMPQFKVDGKLVFERDMAMLAPGYTQTLEPRVQYLYVPYRDQSGIYNYDSSLLQSDYNGLFRDRTYGGLDRIASANQVTT GVTTRIYDDAAVERFNVSVGQIYYFTESRTGDDNIKWENDDKTGSLVWAGDTYWRISERWGLRSGVQYDTRLDSVATSSS SLEYRRDQDRLVQLNYRYASPEYIQATLPSYYSTAEQYKNGINQVGAVASWPIADRWSIVGAYYFDTNSSKPADQMLGLQ YNSCCYAIRVGYERKLNGWDNDKQHAIYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQSSM >Mature_784_residues MKKRIPTLLATMIASALYSHQGLAADLASQCMLGVPSYDRPLVKGDTNDLPVTINADNAKGNYPDDAVFTGNVDIMQGNS RLQADEVQLHQKQAEGQPEPVRTVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGEN RYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTKNY FEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLTQAGAGLMELDYLPSDKVYEDEHPKEGDKHRWLFYWQHSGV MDQVWRFNVDYTKVSDSSYFNDFDSKYGSSTDGYATQKFSVGYAVQNFDATVSTKQFQVFNDQNTSSYSAEPQLDVNYYH NDLGPFDTRIYGQAVHFVNTKDNMPEATRVHLEPTISLPLSNRWGSLNTEAKLMATHYQQTNLDWYNANNSKKLEDSVNR VMPQFKVDGKLVFERDMAMLAPGYTQTLEPRVQYLYVPYRDQSGIYNYDSSLLQSDYNGLFRDRTYGGLDRIASANQVTT GVTTRIYDDAAVERFNVSVGQIYYFTESRTGDDNIKWENDDKTGSLVWAGDTYWRISERWGLRSGVQYDTRLDSVATSSS SLEYRRDQDRLVQLNYRYASPEYIQATLPSYYSTAEQYKNGINQVGAVASWPIADRWSIVGAYYFDTNSSKPADQMLGLQ YNSCCYAIRVGYERKLNGWDNDKQHAIYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQSSM
Specific function: Together with lptE, is involved in the assembly of LPS in the outer leaflet of the outer membrane. Determines N-hexane tolerance and is involved in outer membrane permeability. Essential for envelope biogenesis [H]
COG id: COG1452
COG function: function code M; Organic solvent tolerance protein OstA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lptD family [H]
Homologues:
Organism=Escherichia coli, GI1786239, Length=784, Percent_Identity=91.7091836734694, Blast_Score=1523, Evalue=0.0,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020889 - InterPro: IPR005653 - InterPro: IPR007543 [H]
Pfam domain/function: PF03968 OstA; PF04453 OstA_C [H]
EC number: NA
Molecular weight: Translated: 89645; Mature: 89645
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRIPTLLATMIASALYSHQGLAADLASQCMLGVPSYDRPLVKGDTNDLPVTINADNAK CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCCEECCCCCCCCEEEECCCCC GNYPDDAVFTGNVDIMQGNSRLQADEVQLHQKQAEGQPEPVRTVDALGNVHYDDNQVILK CCCCCCCEEECCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCEECCCEEEEE GPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILENGSFTSCLPGSDTW CCCCCCCCCCCCCEEECCHHHHCCCCCCCHHHHHHHCCCCCEEEEECCCCCEECCCCCCH SVVGSEVIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTKNY HHHHHHHHHCHHHHHHHHHCCCEEECCEEEEECCEEECCCCCCCCCCEECCCCCCCCCCE FEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLTQAGAGLMELDYLPSDKVYED EEEEEEEEEEECCCCCCEECHHHHHHCCCEEEECCHHHHHHCCCCEEEEECCCCCCCCCC EHPKEGDKHRWLFYWQHSGVMDQVWRFNVDYTKVSDSSYFNDFDSKYGSSTDGYATQKFS CCCCCCCCCEEEEEEECCCCHHHHHEECCCEEEECCCCHHCHHHHHCCCCCCCCEEEEEE VGYAVQNFDATVSTKQFQVFNDQNTSSYSAEPQLDVNYYHNDLGPFDTRIYGQAVHFVNT ECEEEECCCCEEECEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEEEC KDNMPEATRVHLEPTISLPLSNRWGSLNTEAKLMATHYQQTNLDWYNANNSKKLEDSVNR CCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEHHHCCCEEEECCCCCHHHHHHHH VMPQFKVDGKLVFERDMAMLAPGYTQTLEPRVQYLYVPYRDQSGIYNYDSSLLQSDYNGL HCCCEECCCEEEEECCHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHCCC FRDRTYGGLDRIASANQVTTGVTTRIYDDAAVERFNVSVGQIYYFTESRTGDDNIKWEND CCCCCCCCHHHHCCCCCEECCCEEEEECCHHHHEECCEEEEEEEEECCCCCCCCCEECCC DKTGSLVWAGDTYWRISERWGLRSGVQYDTRLDSVATSSSSLEYRRDQDRLVQLNYRYAS CCCCCEEECCCCEEEEEHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECC PEYIQATLPSYYSTAEQYKNGINQVGAVASWPIADRWSIVGAYYFDTNSSKPADQMLGLQ CHHEEECCCHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEEEEEEECCCCCCHHHHHCCE YNSCCYAIRVGYERKLNGWDNDKQHAIYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPY ECCEEEEEEECCEEECCCCCCCCCCEEECCCEEEEEEEEECCCCCCCCHHHHHHHCCCCC QSSM CCCC >Mature Secondary Structure MKKRIPTLLATMIASALYSHQGLAADLASQCMLGVPSYDRPLVKGDTNDLPVTINADNAK CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCCEECCCCCCCCEEEECCCCC GNYPDDAVFTGNVDIMQGNSRLQADEVQLHQKQAEGQPEPVRTVDALGNVHYDDNQVILK CCCCCCCEEECCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCEECCCEEEEE GPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILENGSFTSCLPGSDTW CCCCCCCCCCCCCEEECCHHHHCCCCCCCHHHHHHHCCCCCEEEEECCCCCEECCCCCCH SVVGSEVIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTKNY HHHHHHHHHCHHHHHHHHHCCCEEECCEEEEECCEEECCCCCCCCCCEECCCCCCCCCCE FEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLTQAGAGLMELDYLPSDKVYED EEEEEEEEEEECCCCCCEECHHHHHHCCCEEEECCHHHHHHCCCCEEEEECCCCCCCCCC EHPKEGDKHRWLFYWQHSGVMDQVWRFNVDYTKVSDSSYFNDFDSKYGSSTDGYATQKFS CCCCCCCCCEEEEEEECCCCHHHHHEECCCEEEECCCCHHCHHHHHCCCCCCCCEEEEEE VGYAVQNFDATVSTKQFQVFNDQNTSSYSAEPQLDVNYYHNDLGPFDTRIYGQAVHFVNT ECEEEECCCCEEECEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEEEC KDNMPEATRVHLEPTISLPLSNRWGSLNTEAKLMATHYQQTNLDWYNANNSKKLEDSVNR CCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEHHHCCCEEEECCCCCHHHHHHHH VMPQFKVDGKLVFERDMAMLAPGYTQTLEPRVQYLYVPYRDQSGIYNYDSSLLQSDYNGL HCCCEECCCEEEEECCHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHCCC FRDRTYGGLDRIASANQVTTGVTTRIYDDAAVERFNVSVGQIYYFTESRTGDDNIKWEND CCCCCCCCHHHHCCCCCEECCCEEEEECCHHHHEECCEEEEEEEEECCCCCCCCCEECCC DKTGSLVWAGDTYWRISERWGLRSGVQYDTRLDSVATSSSSLEYRRDQDRLVQLNYRYAS CCCCCEEECCCCEEEEEHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECC PEYIQATLPSYYSTAEQYKNGINQVGAVASWPIADRWSIVGAYYFDTNSSKPADQMLGLQ CHHEEECCCHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEEEEEEECCCCCCHHHHHCCE YNSCCYAIRVGYERKLNGWDNDKQHAIYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPY ECCEEEEEEECCEEECCCCCCCCCCEEECCCEEEEEEEEECCCCCCCCHHHHHHHCCCCC QSSM CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA