Definition Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome.
Accession NC_004631
Length 4,791,961

Click here to switch to the map view.

The map label for this gene is 29140594

Identifier: 29140594

GI number: 29140594

Start: 58943

End: 60145

Strand: Direct

Name: 29140594

Synonym: t0052

Alternate gene names: NA

Gene position: 58943-60145 (Clockwise)

Preceding gene: 29140593

Following gene: 29140595

Centisome position: 1.23

GC content: 48.55

Gene sequence:

>1203_bases
ATGGGCAAAATAAAATATAGATTGCCAACGTTACTCGCCATCGGCTTTTGGATGGACGCGGCAAGCGCTACGGTGCTGGA
GCTACCCGCCTGGGAGCGAAACTATACCGGGACTATCGCGGGGAAACCGGTAAACGTTAATATCACGCGATTTGGTAACA
CGCTTTATGGGCATTACTGCTATGAACCTTGCAATCAGCACAAGGCAGTGATTGTTCTACGCGGCTCACTCCAGGATAAA
GAGGTGCATCTTGAAGAACGCGTAAAGGCGCTTTCGGGTTACTGGAATGCGGAAATCTCCAGCAGTGAGATTAAAGGCGA
ATGGACGTCCGCAGATAAAAAACGACATTTTCCTGTTGCCCTTATCTATTACAAACCTAAAAACTCCCCTGATATTGTGC
TGGTCACGAACACGAATGATGCAGGGGGTTACGACCCTTCCAAAGAGATTGATTGCGGCAATACGCCGGCCATTTCGGCG
ATAAAATTATACCGTGATGGTAAACTCATACAGACCTTAGATACCGCCTCGGTGGGCACCTGTAGCCCGTTTATGCCTCA
ATGGGGGGATGTCAATTTTGATGGCTACCCGGATCTATCGATTGTAACAGAGTTACTTGCTGGGCCGGATGCTCCAGTAC
AAACATGGCTCTATGACCCCGCCAAGCAGCGTTATGTTGATGCGCCCGCGTCTTATCAGGAGATCACTTCACCAGAGATC
GATGCTGAACATAAACAGATTGTCAGCTATTGGCGCGGCGGTTGCTGCAGCCATGGCGTCAATGTGTATCGCTGGAAAGG
AAAAACGATTGAACTGATCGATCGCGGTGAAAGCTACTTTCAGCCTGTGATAAGTAAAGGCAAAATGTATAACTGCTACA
TGACACCTTCCTACGCTGATGGGCGTATTATTTATCCGCTAGTACGTAAAAATGGTCATTTGACGCCGCCTCTTAGCCTT
GATGGGACGTGTCAATCTTTTTGGCTAACCGGTAATGTTCGTACCGTGATTCAGGCAGAAAAACCCGGCGCTGAGCCCGA
ATCGCTTGAGATTCAGTGGCAGGAAAACAAAGCATCGCCAGGGCGTTTTTGCCCATTAGTTCCGTTTGTCGAAGGTGATA
AGCTAAGTCCGCGTCTGGTGACGGATGACGATGTGCCTGATACCTGTATCAGTCGCGCTGAGTATGAAGATATAAAACAA
TAG

Upstream 100 bases:

>100_bases
CGTCATCCGGTGCTAATGCCCCACCTTTTTGCTATTCATCTGAAAAACCAGCACAATCGTTGCTGGTTTTTGGGTTGTAA
TGCCTACAGGGATAAGGGAA

Downstream 100 bases:

>100_bases
GTCAGGAGAGCGTTAATGACAGCATCCCTACACATTATTCTTGATACCGATCCGGGCATTGATGACGCGGCTGCGATTGC
CGCTGCGCTGTTCGCCCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MGKIKYRLPTLLAIGFWMDAASATVLELPAWERNYTGTIAGKPVNVNITRFGNTLYGHYCYEPCNQHKAVIVLRGSLQDK
EVHLEERVKALSGYWNAEISSSEIKGEWTSADKKRHFPVALIYYKPKNSPDIVLVTNTNDAGGYDPSKEIDCGNTPAISA
IKLYRDGKLIQTLDTASVGTCSPFMPQWGDVNFDGYPDLSIVTELLAGPDAPVQTWLYDPAKQRYVDAPASYQEITSPEI
DAEHKQIVSYWRGGCCSHGVNVYRWKGKTIELIDRGESYFQPVISKGKMYNCYMTPSYADGRIIYPLVRKNGHLTPPLSL
DGTCQSFWLTGNVRTVIQAEKPGAEPESLEIQWQENKASPGRFCPLVPFVEGDKLSPRLVTDDDVPDTCISRAEYEDIKQ

Sequences:

>Translated_400_residues
MGKIKYRLPTLLAIGFWMDAASATVLELPAWERNYTGTIAGKPVNVNITRFGNTLYGHYCYEPCNQHKAVIVLRGSLQDK
EVHLEERVKALSGYWNAEISSSEIKGEWTSADKKRHFPVALIYYKPKNSPDIVLVTNTNDAGGYDPSKEIDCGNTPAISA
IKLYRDGKLIQTLDTASVGTCSPFMPQWGDVNFDGYPDLSIVTELLAGPDAPVQTWLYDPAKQRYVDAPASYQEITSPEI
DAEHKQIVSYWRGGCCSHGVNVYRWKGKTIELIDRGESYFQPVISKGKMYNCYMTPSYADGRIIYPLVRKNGHLTPPLSL
DGTCQSFWLTGNVRTVIQAEKPGAEPESLEIQWQENKASPGRFCPLVPFVEGDKLSPRLVTDDDVPDTCISRAEYEDIKQ
>Mature_399_residues
GKIKYRLPTLLAIGFWMDAASATVLELPAWERNYTGTIAGKPVNVNITRFGNTLYGHYCYEPCNQHKAVIVLRGSLQDKE
VHLEERVKALSGYWNAEISSSEIKGEWTSADKKRHFPVALIYYKPKNSPDIVLVTNTNDAGGYDPSKEIDCGNTPAISAI
KLYRDGKLIQTLDTASVGTCSPFMPQWGDVNFDGYPDLSIVTELLAGPDAPVQTWLYDPAKQRYVDAPASYQEITSPEID
AEHKQIVSYWRGGCCSHGVNVYRWKGKTIELIDRGESYFQPVISKGKMYNCYMTPSYADGRIIYPLVRKNGHLTPPLSLD
GTCQSFWLTGNVRTVIQAEKPGAEPESLEIQWQENKASPGRFCPLVPFVEGDKLSPRLVTDDDVPDTCISRAEYEDIKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44765; Mature: 44634

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKIKYRLPTLLAIGFWMDAASATVLELPAWERNYTGTIAGKPVNVNITRFGNTLYGHYC
CCCEEECCHHHHHHHHHHCCCCCEEEECCCCCCCCCEEECCCCEEEEEEECCCCEEEEEE
YEPCNQHKAVIVLRGSLQDKEVHLEERVKALSGYWNAEISSSEIKGEWTSADKKRHFPVA
CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEE
LIYYKPKNSPDIVLVTNTNDAGGYDPSKEIDCGNTPAISAIKLYRDGKLIQTLDTASVGT
EEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCC
CSPFMPQWGDVNFDGYPDLSIVTELLAGPDAPVQTWLYDPAKQRYVDAPASYQEITSPEI
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHEECCCHHHHEECCCCCHHHCCCCCC
DAEHKQIVSYWRGGCCSHGVNVYRWKGKTIELIDRGESYFQPVISKGKMYNCYMTPSYAD
CHHHHHHHHHHCCCCHHCCCEEEEECCCEEEEEECCHHHHHHHHHCCCEEEEEECCCCCC
GRIIYPLVRKNGHLTPPLSLDGTCQSFWLTGNVRTVIQAEKPGAEPESLEIQWQENKASP
CEEEEEEEECCCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCEEEEEEECCCCCC
GRFCPLVPFVEGDKLSPRLVTDDDVPDTCISRAEYEDIKQ
CCCCCCCCEECCCCCCCEEECCCCCCHHHHHHCCHHHHCC
>Mature Secondary Structure 
GKIKYRLPTLLAIGFWMDAASATVLELPAWERNYTGTIAGKPVNVNITRFGNTLYGHYC
CCEEECCHHHHHHHHHHCCCCCEEEECCCCCCCCCEEECCCCEEEEEEECCCCEEEEEE
YEPCNQHKAVIVLRGSLQDKEVHLEERVKALSGYWNAEISSSEIKGEWTSADKKRHFPVA
CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEE
LIYYKPKNSPDIVLVTNTNDAGGYDPSKEIDCGNTPAISAIKLYRDGKLIQTLDTASVGT
EEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCC
CSPFMPQWGDVNFDGYPDLSIVTELLAGPDAPVQTWLYDPAKQRYVDAPASYQEITSPEI
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHEECCCHHHHEECCCCCHHHCCCCCC
DAEHKQIVSYWRGGCCSHGVNVYRWKGKTIELIDRGESYFQPVISKGKMYNCYMTPSYAD
CHHHHHHHHHHCCCCHHCCCEEEEECCCEEEEEECCHHHHHHHHHCCCEEEEEECCCCCC
GRIIYPLVRKNGHLTPPLSLDGTCQSFWLTGNVRTVIQAEKPGAEPESLEIQWQENKASP
CEEEEEEEECCCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCEEEEEEECCCCCC
GRFCPLVPFVEGDKLSPRLVTDDDVPDTCISRAEYEDIKQ
CCCCCCCCEECCCCCCCEEECCCCCCHHHHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA