| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is 29140594
Identifier: 29140594
GI number: 29140594
Start: 58943
End: 60145
Strand: Direct
Name: 29140594
Synonym: t0052
Alternate gene names: NA
Gene position: 58943-60145 (Clockwise)
Preceding gene: 29140593
Following gene: 29140595
Centisome position: 1.23
GC content: 48.55
Gene sequence:
>1203_bases ATGGGCAAAATAAAATATAGATTGCCAACGTTACTCGCCATCGGCTTTTGGATGGACGCGGCAAGCGCTACGGTGCTGGA GCTACCCGCCTGGGAGCGAAACTATACCGGGACTATCGCGGGGAAACCGGTAAACGTTAATATCACGCGATTTGGTAACA CGCTTTATGGGCATTACTGCTATGAACCTTGCAATCAGCACAAGGCAGTGATTGTTCTACGCGGCTCACTCCAGGATAAA GAGGTGCATCTTGAAGAACGCGTAAAGGCGCTTTCGGGTTACTGGAATGCGGAAATCTCCAGCAGTGAGATTAAAGGCGA ATGGACGTCCGCAGATAAAAAACGACATTTTCCTGTTGCCCTTATCTATTACAAACCTAAAAACTCCCCTGATATTGTGC TGGTCACGAACACGAATGATGCAGGGGGTTACGACCCTTCCAAAGAGATTGATTGCGGCAATACGCCGGCCATTTCGGCG ATAAAATTATACCGTGATGGTAAACTCATACAGACCTTAGATACCGCCTCGGTGGGCACCTGTAGCCCGTTTATGCCTCA ATGGGGGGATGTCAATTTTGATGGCTACCCGGATCTATCGATTGTAACAGAGTTACTTGCTGGGCCGGATGCTCCAGTAC AAACATGGCTCTATGACCCCGCCAAGCAGCGTTATGTTGATGCGCCCGCGTCTTATCAGGAGATCACTTCACCAGAGATC GATGCTGAACATAAACAGATTGTCAGCTATTGGCGCGGCGGTTGCTGCAGCCATGGCGTCAATGTGTATCGCTGGAAAGG AAAAACGATTGAACTGATCGATCGCGGTGAAAGCTACTTTCAGCCTGTGATAAGTAAAGGCAAAATGTATAACTGCTACA TGACACCTTCCTACGCTGATGGGCGTATTATTTATCCGCTAGTACGTAAAAATGGTCATTTGACGCCGCCTCTTAGCCTT GATGGGACGTGTCAATCTTTTTGGCTAACCGGTAATGTTCGTACCGTGATTCAGGCAGAAAAACCCGGCGCTGAGCCCGA ATCGCTTGAGATTCAGTGGCAGGAAAACAAAGCATCGCCAGGGCGTTTTTGCCCATTAGTTCCGTTTGTCGAAGGTGATA AGCTAAGTCCGCGTCTGGTGACGGATGACGATGTGCCTGATACCTGTATCAGTCGCGCTGAGTATGAAGATATAAAACAA TAG
Upstream 100 bases:
>100_bases CGTCATCCGGTGCTAATGCCCCACCTTTTTGCTATTCATCTGAAAAACCAGCACAATCGTTGCTGGTTTTTGGGTTGTAA TGCCTACAGGGATAAGGGAA
Downstream 100 bases:
>100_bases GTCAGGAGAGCGTTAATGACAGCATCCCTACACATTATTCTTGATACCGATCCGGGCATTGATGACGCGGCTGCGATTGC CGCTGCGCTGTTCGCCCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MGKIKYRLPTLLAIGFWMDAASATVLELPAWERNYTGTIAGKPVNVNITRFGNTLYGHYCYEPCNQHKAVIVLRGSLQDK EVHLEERVKALSGYWNAEISSSEIKGEWTSADKKRHFPVALIYYKPKNSPDIVLVTNTNDAGGYDPSKEIDCGNTPAISA IKLYRDGKLIQTLDTASVGTCSPFMPQWGDVNFDGYPDLSIVTELLAGPDAPVQTWLYDPAKQRYVDAPASYQEITSPEI DAEHKQIVSYWRGGCCSHGVNVYRWKGKTIELIDRGESYFQPVISKGKMYNCYMTPSYADGRIIYPLVRKNGHLTPPLSL DGTCQSFWLTGNVRTVIQAEKPGAEPESLEIQWQENKASPGRFCPLVPFVEGDKLSPRLVTDDDVPDTCISRAEYEDIKQ
Sequences:
>Translated_400_residues MGKIKYRLPTLLAIGFWMDAASATVLELPAWERNYTGTIAGKPVNVNITRFGNTLYGHYCYEPCNQHKAVIVLRGSLQDK EVHLEERVKALSGYWNAEISSSEIKGEWTSADKKRHFPVALIYYKPKNSPDIVLVTNTNDAGGYDPSKEIDCGNTPAISA IKLYRDGKLIQTLDTASVGTCSPFMPQWGDVNFDGYPDLSIVTELLAGPDAPVQTWLYDPAKQRYVDAPASYQEITSPEI DAEHKQIVSYWRGGCCSHGVNVYRWKGKTIELIDRGESYFQPVISKGKMYNCYMTPSYADGRIIYPLVRKNGHLTPPLSL DGTCQSFWLTGNVRTVIQAEKPGAEPESLEIQWQENKASPGRFCPLVPFVEGDKLSPRLVTDDDVPDTCISRAEYEDIKQ >Mature_399_residues GKIKYRLPTLLAIGFWMDAASATVLELPAWERNYTGTIAGKPVNVNITRFGNTLYGHYCYEPCNQHKAVIVLRGSLQDKE VHLEERVKALSGYWNAEISSSEIKGEWTSADKKRHFPVALIYYKPKNSPDIVLVTNTNDAGGYDPSKEIDCGNTPAISAI KLYRDGKLIQTLDTASVGTCSPFMPQWGDVNFDGYPDLSIVTELLAGPDAPVQTWLYDPAKQRYVDAPASYQEITSPEID AEHKQIVSYWRGGCCSHGVNVYRWKGKTIELIDRGESYFQPVISKGKMYNCYMTPSYADGRIIYPLVRKNGHLTPPLSLD GTCQSFWLTGNVRTVIQAEKPGAEPESLEIQWQENKASPGRFCPLVPFVEGDKLSPRLVTDDDVPDTCISRAEYEDIKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44765; Mature: 44634
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKIKYRLPTLLAIGFWMDAASATVLELPAWERNYTGTIAGKPVNVNITRFGNTLYGHYC CCCEEECCHHHHHHHHHHCCCCCEEEECCCCCCCCCEEECCCCEEEEEEECCCCEEEEEE YEPCNQHKAVIVLRGSLQDKEVHLEERVKALSGYWNAEISSSEIKGEWTSADKKRHFPVA CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEE LIYYKPKNSPDIVLVTNTNDAGGYDPSKEIDCGNTPAISAIKLYRDGKLIQTLDTASVGT EEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCC CSPFMPQWGDVNFDGYPDLSIVTELLAGPDAPVQTWLYDPAKQRYVDAPASYQEITSPEI CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHEECCCHHHHEECCCCCHHHCCCCCC DAEHKQIVSYWRGGCCSHGVNVYRWKGKTIELIDRGESYFQPVISKGKMYNCYMTPSYAD CHHHHHHHHHHCCCCHHCCCEEEEECCCEEEEEECCHHHHHHHHHCCCEEEEEECCCCCC GRIIYPLVRKNGHLTPPLSLDGTCQSFWLTGNVRTVIQAEKPGAEPESLEIQWQENKASP CEEEEEEEECCCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCEEEEEEECCCCCC GRFCPLVPFVEGDKLSPRLVTDDDVPDTCISRAEYEDIKQ CCCCCCCCEECCCCCCCEEECCCCCCHHHHHHCCHHHHCC >Mature Secondary Structure GKIKYRLPTLLAIGFWMDAASATVLELPAWERNYTGTIAGKPVNVNITRFGNTLYGHYC CCEEECCHHHHHHHHHHCCCCCEEEECCCCCCCCCEEECCCCEEEEEEECCCCEEEEEE YEPCNQHKAVIVLRGSLQDKEVHLEERVKALSGYWNAEISSSEIKGEWTSADKKRHFPVA CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEE LIYYKPKNSPDIVLVTNTNDAGGYDPSKEIDCGNTPAISAIKLYRDGKLIQTLDTASVGT EEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCC CSPFMPQWGDVNFDGYPDLSIVTELLAGPDAPVQTWLYDPAKQRYVDAPASYQEITSPEI CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHEECCCHHHHEECCCCCHHHCCCCCC DAEHKQIVSYWRGGCCSHGVNVYRWKGKTIELIDRGESYFQPVISKGKMYNCYMTPSYAD CHHHHHHHHHHCCCCHHCCCEEEEECCCEEEEEECCHHHHHHHHHCCCEEEEEECCCCCC GRIIYPLVRKNGHLTPPLSLDGTCQSFWLTGNVRTVIQAEKPGAEPESLEIQWQENKASP CEEEEEEEECCCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCEEEEEEECCCCCC GRFCPLVPFVEGDKLSPRLVTDDDVPDTCISRAEYEDIKQ CCCCCCCCEECCCCCCCEEECCCCCCHHHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA