| Definition | Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome. |
|---|---|
| Accession | NC_004578 |
| Length | 6,397,126 |
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The map label for this gene is ubiB
Identifier: 28872264
GI number:
Start: 5862390
End: 5864009
Strand: Direct
Name: ubiB
Synonym: PSPTO_5152
Alternate gene names: NA
Gene position: NA
Preceding gene: 28872263
Following gene: 28872265
Centisome position: NA
GC content: NA
Gene sequence:
>1620_bases ATGAAGCTGCTTGCCGTCCGCCGTCTGTTTCGCATTCAACGTGTCGTTATTCGCTATCGCCTCGATGACTTGTTGTTCGC TTTGCCCTTGCCGTGGTGGATGCTCGCGGTGCGTTTCGTGCTGCCCTGGCGCTGGCTGCCACGGCGCAAGTCCGAGCTGA GCCGTGGCGTACGTTTTCGTCTGGCACTGCAAGACCTGGGGCCGATTTTCATCAAGTTCGGGCAACTGCTGTCCACGCGC CGCGATCTGCTGCCCGAAGACATCGCCGACGAGCTGATGCTGCTGCAGGACCGCGTGCCGCCGTTCGACCAGCAAGTGGC CATCAAGCTGATCGAAGAACAACTGGGCGCACGTATCTGCGATGTGTTCAGCCGGTTTGACGAAACACCATTGGCATCGG CGTCGGTGGCGCAAGTGCATGCCGCGTGCCTCAAGACTGGCGAAGAAGTCGTGGTGAAAGTGGTACGCCCGGGGCTCAAA CCGATCATCGGCCAAGACCTTGCCTGGCTGTTCATCCTTGCCCGCATGGCCGAGCGTGTTTCCGCCGATGCGCGCCTGCT GCACCCGGTGCAGGTGGTGATGGACTACGAAAAAACCATCTACGACGAGCTGGACCTGCTGCGCGAAGCGGCCAACTCCA GCCAGCTGCGCCGCAACTTCGAAGGCTCCGACCTGCTTTACGTGCCACAAGTCTACTGGGACTGGTGCCGTCCGAAAGTA CTGGTCATGGAGCGCATCTACGGCCTGCAGGTCACTGACATGGCCGGGCTGGCCGATCAGCGCACCGACATGAAGATGCT CGCCGAGCGCGGCGTGGAGATCTTCTTCACGCAGATCTTTCGCGACAGCTTTTTCCATGCTGACATGCACCCCGGCAATA TTTTCGTCAGCACGGTCAATCCGTGGGCGCCGAAATACATCGCCATCGACTGCGGCATCGTCGGCAGTCTTACGCCGGAA GACCAGGATTATCTGGCGCGTAACCTGTTTGCCTTCTTCAAACGCGATTATCGCCGGGTTGCGCAGTTGCACATCGATTC GGGCTGGGTGCCGGCCGAGACCAAGCTCAATGAATTCGAAGCGGCCATCCGTACCGTCTGCGAGCCGATCTTCGAGAAGC CGCTCAAGGATATTTCCTTTGGTCAGGTGCTGATGCGCCTGTTCCAGACCGCGCGCCGCTTCAATATGGAAGTTCAGCCG CAACTGGTTCTGCTGCAAAAGACCCTGCTCAACATCGAAGGGCTGGGTCGTCAGCTGTACCCGGAGCTGGATCTGTGGAG CACCGCGCAGCCGTATCTGGAGCGCTGGATGCGTGAGCGGGTCAGCCCGAAAACCCTGCTGGGCAACCTGCAATCCCAGG TCGAGCAACTACCGCATATCGCCGGCATGACCCGCGACCTGCTGGAGCGCATGTCCCGCCCGCATGCTTCGGACCCGCCA CGCCCCTGGCACGATCGCAAGGACGAGCCGGTCTTGCGGCTCATCGGTGCGGCCTTGCTGGTGGGCGGTGCGATACAGGG CTGGGTGATGAGCGAGGCAGCCACGCAGCTGCTGACGCTGACCGCATGGCCGGCGGCGATCATGCTGATCGCCGGGCTGT ATCTGATCGTTCGCCGATAG
Upstream 100 bases:
>100_bases AGGCACGCTTCGCCGAACTCGACCGGATCAAACTCGATCTGGACCGTCTCGAGGCGCGTTTTGCCCGCCTTGCCCACTTT CTCAATACCAGCGATAACGC
Downstream 100 bases:
>100_bases CCAGCAGCGTATGGCGCTGGCACACTGTTCAATCCGCCGGGCCTGAAGTCCGGCTGCCGGAGTAGATATGAAAGACTGGC TGGACGAGATTCACTGGAAC
Product: ubiquinone biosynthesis protein UbiB
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>539_residues MKLLAVRRLFRIQRVVIRYRLDDLLFALPLPWWMLAVRFVLPWRWLPRRKSELSRGVRFRLALQDLGPIFIKFGQLLSTR RDLLPEDIADELMLLQDRVPPFDQQVAIKLIEEQLGARICDVFSRFDETPLASASVAQVHAACLKTGEEVVVKVVRPGLK PIIGQDLAWLFILARMAERVSADARLLHPVQVVMDYEKTIYDELDLLREAANSSQLRRNFEGSDLLYVPQVYWDWCRPKV LVMERIYGLQVTDMAGLADQRTDMKMLAERGVEIFFTQIFRDSFFHADMHPGNIFVSTVNPWAPKYIAIDCGIVGSLTPE DQDYLARNLFAFFKRDYRRVAQLHIDSGWVPAETKLNEFEAAIRTVCEPIFEKPLKDISFGQVLMRLFQTARRFNMEVQP QLVLLQKTLLNIEGLGRQLYPELDLWSTAQPYLERWMRERVSPKTLLGNLQSQVEQLPHIAGMTRDLLERMSRPHASDPP RPWHDRKDEPVLRLIGAALLVGGAIQGWVMSEAATQLLTLTAWPAAIMLIAGLYLIVRR
Sequences:
NA
Specific function: NA
COG id: COG0661
COG function: function code R; Predicted unusual protein kinase
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA