Click here to switch to the map view.

The map label for this gene is dbpA

Identifier: 28872121

GI number:

Start: 5691491

End: 5692870

Strand: Direct

Name: dbpA

Synonym: PSPTO_5007

Alternate gene names: NA

Gene position: NA

Preceding gene: 28872120

Following gene: 28872122

Centisome position: NA

GC content: NA

Gene sequence:

>1380_bases
GTGACTAACACCGCTTTCAATTCTCTGCCTCTGTCTGCTGCCATGCTGGCTAACCTGGAGTCGCTTGGTTATGCCGAAAT
GACGCCGATTCAGGCGCAGAGCCTGCCGGTGATCCTCAAGGGCATGGACCTGATCGCGCAAGCCAAGACCGGTAGCGGCA
AGACCGCTGCGTTCGGCATCGGCCTGCTCAACCCGATCAACCCGCGCTTCTTCGGCTGCCAGGCACTGGTCATGTGCCCG
ACCCGCGAGCTGGCGGATCAGGTGGCCAAGGAAATCCGTCGTCTGGCCCGCTCGGAAGACAACATCAAAGTGCTGACCCT
TTGCGGCGGTGTGTCTTTTGGCCCGCAGATCGGCTCGCTGGAGCACGGCGCGCACATCATCGTTGGCACGCCAGGCCGCA
TTCAGCAGCATTTGCGCAAAGGCTCGCTGGTGCTTGACGGCCTGAACACGCTGATTCTCGATGAAGCCGATCGCATGCTG
GACATGGGTTTCTACGATTCCATCGCCGATATCATCGAGCAGACCCCGCAGCGCCGCCAAACCCTGCTGTTTTCGGCCAC
TTACCCGGTCGGTATCAAGCAACTGTCGTCGAAGTTCATGCGCGATCCACAGACTGTCAAAGTCGAAGCGCTGCACGCCG
ACAGCCAGATCGAGCAGATTTTCTACGAGATCTCCCCCGAGCAGCGCCTGGAAGCCGTGGTCAAGGTACTCGGCCATTTC
CGTCCAACGTCCTGCGTCGCGTTCTGTTTCACCAAGCAGCAGGTTCAGGAAGTGGTCGACCACCTGACCGCCAAAGGCAT
GTCTGCGGTCGGCCTGCATGGCGATCTGGAACAGCGTGACCGTGATCAGGTGCTGGCGATGTTCGCCAACCGCAGTACTT
CGGTACTGGTCGCCACCGACGTAGCCGCGCGCGGTCTGGACATCGATGCACTGGATATGGTGCTCAACGTCGAACTGGCC
CGCGATTCGGAAATCCACATTCACCGTGTAGGCCGTACCGGTCGCGCAGGCGAGACAGGCATCGCGGTAAGCCTCGTGGC
ACCGTCGGAAAGCCAGCGCGCCCGCGCCATCGAAGAATTGCAGAAAGCCCCGTTGAACTGGCAGCAGTACGACAGCCTGA
GCATCAAGGAAGGCGGCAAGCTGCTGCCCGCCATGACCACGCTGTGCATCGGTTCCGGGCGCAAGGACAAACTGCGTCCG
GGCGACATCCTCGGCGCACTGACCGGCGAAGCGGGTATTGCGGGCACCCAGGTCGGCAAGATCGCAATCTTCGACTTTCA
GGCCTACGTCGCCGTCGAACGCAGCATGGCCAAACAGGCGCTGGAGCGACTGAACAACGGCAAGATCAAAGGCAAATCGC
TGCGCGTACGAATCCTCTGA

Upstream 100 bases:

>100_bases
GCCGTTCTGGCAACTCTGCGTACGATTCCGAGCGGTCGGTGCCAGGTCTGGCTGGCGGGTGATACACTGCGCGACATTTT
TGTTTTGCAGGTCCACCGTC

Downstream 100 bases:

>100_bases
AATAGTCGTTAGCTGGATTATCGTCCCCACGCCCCGCGTGGGGACGCAGTTCTGGACGCCCTGCGTCCGATTTTGAATAG
TTGGTGCGGCGCAGATAGGT

Product: ATP-independent RNA helicase DbpA

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>459_residues
MTNTAFNSLPLSAAMLANLESLGYAEMTPIQAQSLPVILKGMDLIAQAKTGSGKTAAFGIGLLNPINPRFFGCQALVMCP
TRELADQVAKEIRRLARSEDNIKVLTLCGGVSFGPQIGSLEHGAHIIVGTPGRIQQHLRKGSLVLDGLNTLILDEADRML
DMGFYDSIADIIEQTPQRRQTLLFSATYPVGIKQLSSKFMRDPQTVKVEALHADSQIEQIFYEISPEQRLEAVVKVLGHF
RPTSCVAFCFTKQQVQEVVDHLTAKGMSAVGLHGDLEQRDRDQVLAMFANRSTSVLVATDVAARGLDIDALDMVLNVELA
RDSEIHIHRVGRTGRAGETGIAVSLVAPSESQRARAIEELQKAPLNWQQYDSLSIKEGGKLLPAMTTLCIGSGRKDKLRP
GDILGALTGEAGIAGTQVGKIAIFDFQAYVAVERSMAKQALERLNNGKIKGKSLRVRIL

Sequences:
NA

Specific function: NA

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA