Definition Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome.
Accession NC_004578
Length 6,397,126

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 28871736

GI number:

Start: 5196863

End: 5198458

Strand: Direct

Name: Not Available

Synonym: PSPTO_4604

Alternate gene names: NA

Gene position: NA

Preceding gene: 28871735

Following gene: 28871737

Centisome position: NA

GC content: NA

Gene sequence:

>1596_bases
GTGAACATTGCCGTCGATGCACTTCAGGCACCCACGAAGACCACGCTAGATGCATGGCTGAACACGCCGCGCCTGGCGAA
ATGTGGGAAGGTATTCACACCCGCCGAACCGATGTGGAAACCGGATAAATCGGCTAATCGATCAGTCAACTGGGAAGCGG
CCATTGGCTGCGTCTCGCCGGATTGGCAGCCATGGTTGCACGCCACCCTGGCGTACCGAATGGCCGATATGGCAGCAAGC
ACGGTTGCTCACGCCGCCAGTGGGTTGTCGCGTGCTGCTCAGGCCGGGATTGACCCGCTCAACGAGGATCACCTGATCGC
TCTGCGGGAGCGCTTGAACGAAGGTGAGTTTAGTACCATTGCCGCTTTAATGGCGTTTTGGCACGACTGCGAATCTCTCG
AACAGCGCCCGTCGCAACCCCTAATCGGTGCCTACCAAGCACTGCCCAGGAAAAAGCGTTCCAGAAACGATGTGATCCTC
AGCCTAGACCCCGAACAAGGCCCGTTCACGCAGGTGGAGCAGGACGCGCTGCATCAATGGATACATCAGCAGTTTTGTCA
CGCTCAGTTAGATCCCGAGCAGTATCTTTACCTGCGTTTGTTGATGATTTATGGGCAACGTGGCGCTCAGGTGAGAATGA
TGGTTTTTGGTGATTTCACCAAGAGCGATCAGGGCTGCAAGGTCAGGTTTCACAGGGCAAAGCAAAAAGGCGACGAGGCG
GGTTGGCGAGCAAAGTCCGAAACATTCACTCTGGATGAGGATTTCTTCAACACCGTGCAGGCTTACAAGGCAATGGTTCT
GGCGCAACTCTGGCAAGCGTATCCAGACGGTGCCGACTGGAATGTAGCCATTGAGAATGTGCCCCTCTTTCGCCGGAAGC
TTGAGGATAAAGCAGAATTTTGGGAGCGGCTGACTCCCCCTGTTTTGCTCGATAGCCCCCATCAAAAAAGCCTCGAAGAC
GCGCCGCAGCCGACCTTTCATGTCGGACCAGGCACGCTCAGGTCATGGCTTGCTCGCATCGAGCGGATGGAGGGCTTTCC
GATTTCGCCTCGCACCCATCAGCCGCTGAAAATGACGCGGGGGCACCGGTTCAGGCACACCCTAGGCACGGACCTTTCCA
ATGCAGGGCTGGATGAGTGGACGATGGCCCGCGCATTTATGCACATCGATACTCAGACAGTGCGAAAGTACCGACAGGTG
TCGGCGGAGTTAATGGCGTTGGTGGACGCGAAGATGAGCGACCACCTGGCCCTGGTTGTGAATGCGTTTACCGGAATCAT
CGTCACAGATCGCGCCTCAGCGAAAAACGGAGATCGAGCGGATCGACAAATCGAGGATGTGGCAGTATGCGGTGCCACTG
CCGCCTGCCATCTAGATGCGCCGTTTACCTGTTACGCATGCGCAAAATTCCAACCCCTTCTGTACGCCAATCACCGTGAG
GTCCTTGAGCGATTGGAACGTCGTCGGGCCCAAACCATTGACACAGATAAAACGACCGGTGTGCTCTGGGATCGGGCCAT
CCTGGCTTGTCGGAAGGTCATTTTGGATTGTGAGGCCATGCGCCGATCATCGGACTCAAGGAGAACAGAGGAATGA

Upstream 100 bases:

>100_bases
CGAAATTCTGGAAGGAAGAGGCAGACGAAGCGATACAGAAACGGGCCGAGCGGTTTAAGGCCATCCGTCAGAAGGCCGGC
ACGACACTAGGAGGTTCAGA

Downstream 100 bases:

>100_bases
CCGATGCGCTTGATTCTGAACCGACAAATAACATTGCTGATTTTAAGCCCATGAGCCAACTGGCTGCAGAGGCTCACCTC
GCGGCGTTTATTGAATGGGC

Product: site-specific recombinase, phage integrase family

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>531_residues
MNIAVDALQAPTKTTLDAWLNTPRLAKCGKVFTPAEPMWKPDKSANRSVNWEAAIGCVSPDWQPWLHATLAYRMADMAAS
TVAHAASGLSRAAQAGIDPLNEDHLIALRERLNEGEFSTIAALMAFWHDCESLEQRPSQPLIGAYQALPRKKRSRNDVIL
SLDPEQGPFTQVEQDALHQWIHQQFCHAQLDPEQYLYLRLLMIYGQRGAQVRMMVFGDFTKSDQGCKVRFHRAKQKGDEA
GWRAKSETFTLDEDFFNTVQAYKAMVLAQLWQAYPDGADWNVAIENVPLFRRKLEDKAEFWERLTPPVLLDSPHQKSLED
APQPTFHVGPGTLRSWLARIERMEGFPISPRTHQPLKMTRGHRFRHTLGTDLSNAGLDEWTMARAFMHIDTQTVRKYRQV
SAELMALVDAKMSDHLALVVNAFTGIIVTDRASAKNGDRADRQIEDVAVCGATAACHLDAPFTCYACAKFQPLLYANHRE
VLERLERRRAQTIDTDKTTGVLWDRAILACRKVILDCEAMRRSSDSRRTEE

Sequences:
NA

Specific function: NA

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA