| Definition | Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome. |
|---|---|
| Accession | NC_004578 |
| Length | 6,397,126 |
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Identifier: 28871479
GI number:
Start: 4902312
End: 4906652
Strand: Direct
Name: Not Available
Synonym: PSPTO_4343
Alternate gene names: NA
Gene position: NA
Preceding gene: 28871478
Following gene: 28871480
Centisome position: NA
GC content: NA
Gene sequence:
>4341_bases ATGGAAGCTCAATCGCAATCGCAGAATCAATCGCCGCAATCTCTCCAGCCGGCTGTTGCCACCCCGTTATTACCCAAAGG CGGTGGCGCGATTCAAAGCATCGGCAAGGGCTGGGGATCCGTTGGTACCAGCGGCGCGGCGTCACTGGAAGTCGCTCTGC CGATCAGCCCGGGACGCGGTTACGCGCCCGCCCTGTCGCTGAGTTATCAGAGCACTTCCGGCAACGGAGTGTTCGGACTT GGCTGGAACCTGAACACCAGCAAAGTCGCGCGTCGTGCCAGCAAGGGCGTACCGACCTATGCCAACGATGACCTCATTTT CGGCCCCGGAGGCGATGTCTGCCTGCCAGAACGTGACGACAGCGGCGCGCTGGTTTCGACTCAGGTCAGTCGCTACAACG ACCATGATTTGAATGCGACTTATCAGGTGGTGCGTTACTTCAGCCGAGTCGAAGGGGCCTTTTTGCGCATCGAGCATTGG CGCGTAGACATTGCAGATCCCGGCTTCTGGCTGATTCACGGTGCCGACGGCAGCCTGAACCTTTATGGCAGGAGGACCTC GTCGCGCATTGCCGACCCGGCAGACATGAATCGGGTTGCCGAATGGTTGCTGGATGAAAGCATGAATGCCATCGGCGAAC ACATCCTCTATGAATACAAGCCCGAAGACCATCAGGGCCTGGCGGAGGATCACCCGAGAAACTTCCGCGCCCAACGCTAC CTGAGCCGGGTTCGCTACGGCAATGCCAAGGCGCACTACGTACTTTACCTGTGGCAGGAAGATTCGCTGGACGGTTTGCT GTGGCATTTCGACCTGATATTCGACTATGACCAGCGCGACACCCGCAGTGAGCCGCCCCCGGAATACGACGAGCAATTTA CCTGGCCGGTGCGCAGTGATCCGCATTCAAGTTTCGCCTATGGTTTTGAGCTGGGTAATCTGCGCCTGTGCCGGCAGGTT TTGATGTTCCATCACTTCCCGAATGAACTCGGAGAAGCCCCGCTGCTGACCCGGCGACTGCTGCTGGAGCACCTTCAGAC AACGCTCGGCTACAACCTGCTGAGCGCGGCGCATTCGCAGGCATGGGATGGCACGGACTGGCGGCGCGTCGATCAGCAAC CTCCTGTGCAATTTCAATACACCGATTTCAGTCTTGAGTCGGGCATCTACACGCCACTGGAGCCCATGGCCGGCCTGAAT GACGGCCAGCAATACCAGTTGGTCGATCTGTATGGCGACGGCTTGCCCGGCATTCTGTACCGAGACGACAAGGCCTGGCT CTATCGCGAACCGGTCCGTGATACCACTGGCGGAGCGGACGCCGTTGCCTACGGAGCCTGTCAACCGCTACCCCGCATCC CCACGGCTGATTCAGCCACACCGGTACGTCAGACCCTCACAGATCTGACCGGCGACGGGCGGCTGGACTGGGTTGTAGCC CAGCCGGGAATGGCCGGATTCTTTACCCTCAACCCTGATCGAAGCTGGTCGAACTACGCCACATTCTCGGCTTTTCCTGC AGAGTTTTTCCACCCGCAAGGCCAGATGGCGGATCTGGTCGGCGACGGGTTGTCGGATCTGGCCTTGATCGGGCCGCGCA GCGTTCGCCTGTACGCCAACCGTCGAGCCGATGGATTCGCCGCAGCAACGGACATTCCTCACGACGAGGATCGCCTGCCA TTGCTCAGCGACAGTTCCACTGAACTGGTGGCGTTCAGCGACCTGCTGGGCACAGGGCAACAACACCTGATCCGTATCCG GCACAACGAAATCCGCGTCTGGCCAAACCTGGGCCGAGGCCGGTTCGGCAAGGGCCAGTTGTTTGCCACCCTGCCCTACA CCTATGAAGCCTTTGATTCGAGCCAGGTGCGGCTGGCCGACCTGGACGGTTCAGGTGCCAGTGACGTGCTGTACCTGCAA GCCGATGGCTTTCAGGTCTTCATGAACCGGGGCGGCAACGGGCTGGCCGCGCCCTTCGATCAGCGCTGGCCGGAGGGCGT GCGTTATGACCGGTTCTGTCAGTTCAGTGCGGTCGATCTGCTGGGCCTCGGTTTCTCCAGCCTGGTACTGACCGTACCGC ACATGGCGCCACTGCACTGGAGCCTTTACTACGCGGCGGACCGGGCAGGCTCGGTGCGCAAACCTTATTTGCTGAAGGCC TCGGACAACAATCTCGGTGCTGCCGGAGAAGTCAGCTATCGCAGTTCGGCGCAGGAATGGCTGGACGAAAAAAACGAGCT GCGGGCCGCAGGCAGCGTTGCTGTCTCGGAATTACCGTTCCCGGTTCATGTGGTCGTCAGGCAAACCATGCAGGACAAGG TCACTGGCAATACGCTGACTCAGTTGTTCCGCTATCGGCAGGGTTTCTATGACCCTCGCGAACGCGAGTTTCGCGGCTTC GGCCTGCTCCTGCAGACCGACACCGAAACGTCGTCGCAGGATCAGGAAGACTTTACCGCTCCGGTATTGAACAAGACCTG GTTCCACACCGGACGCTATCCTGCCAGACCCTGCACCGACCATGACCGCAGCGATCTCCTGGCACGCTTGCCCGGCGAGC ATGTGTTGTCCCGACTCGACGCCGCAACCCAGACAGAGCAGCCAATAACGGATGCGGATGACGCGACCTTGCAGGAAATG GCGCGAGCGCTGAGCGGCTCGGTACTGCGCAGCGAAGTCTTTGGGCTCGACGCCAGTCAACGTCCCACAGTGCTGTATTC GACCCGGTCATGCCGCTATCTGGTTCGCCAACTGCAAGCATTGAGCGCACATCGACCCTACGCGTCGATGCTGCCGCTGA GCCTGGAAGTCATCACCTATCGTTACGAGGCCGAGGAACTGGAGGACCCGATGTGCGAACACAGCCTGAACCTGGCGTGG GACCGCTACGGCTCGACGCTCCACTCAGTCAGCGTCAACTATGCCCGGCGCAAGAAACCGGGTGACGCGCCACCCTTTGC GGACCCTCACCAGCAACAATGGTGGGAGGCGTCACACGACGACGCCCAGCAACAGTTCTACCTGAATGAAATGCACGCCG AAGCAATTTACCTGGACAGCCCGCAGAGCTGGCGTCTGGGGCTGCCTTACCGCACACGCGGCGACGCCATGCTCATTCCG GCAAGCGCCTTGACGCCTGCGCAGATCAGCTACGAACAGTTCGCCGATCCGTCCGGGCCCTTCGCAACCTTGCCACGTAC GCTCACCAGTCTGTCGGTGCAACGCTACATCGGTTGCGGCGATGGCGAGGCGTCCTTTCAGGCGCTGGCTGACGCCGTTG AAACGGCTGAACTGGATGATCATGCACTGAGCGCCTATGAGCGGGTCATGGACAGCGTCACTCTGGCCGAAAAACTCGTC GAGATCGGTTATCAGCAGATGCCAAGCTTTCTGCCAGCAGACAGCCTGAATCTATGGTCGGTAAAACGCGGCTTCGCCAC CTACGCCGGTCAGGAGCACTTCTTTCATCCCACTCAGTTCAGGCCCACGCGCAGTCACGGCTGGAGTCTCGTCGAATACG ACGCCTACCACCTGTTCGCAACTCGCATCACCGACCCGGCAGACTGCGTCACTACCGCTGAATACGATTATCGTGTGCTG CAACCAAAACGAATCATCGACCCCAATCAGAACCGTCAGGAAGCTGATTACGACGCCTTCGGCAGAGTATGGGCAACCAG CTTTTACGGCACGGAACTGGGTGAGGCAGTCGGTTTTCCTCCACTCAATCGCGCCGGGCATTATTGGGCTTCTGCCGGCG AGGTAGCGCTGCAACCCGAATACGCTCTGGGCAGGCAAGCCAGCGCGCTCTATTACGACGGCAACACGGTTCTGGGGCTG GTCCACATCCCGCTGGCAACCGCTGTCCTGGTTGCAGACCGCTACCCGGAAGACCTGGACAAGCAGATCCGCATCAGCAT GGCGTCGATAGACGGCTTCGGTCGCACGCTGCAAACCCGTCAAAAGGTGGAGGACGGCGACGCCTATTCAGTCGATGAAT GGGGCAATCTGGAACTGGTCGACGGTAAGCCGAAAATTGTCCACGCATCACCGCGCTGGCGTATCAGTGAACGTGTGGAA TACAACAATAAAGGCCTGGCGGTGCGCGTTTATCGGCCGTATTTCGCCAACAGTCATCTGTATGTGAACGACGCATCGAT ACGCTCACAAAACATTGTCGACAAACAGTTCTACGACCCGCTGGGGCGTCCGACCATCACAATCACCGCCAAAGGCTGGA TGCGCCGACAGACCTATCGAGTCTGGTACACCATCAGTGAGGACGAAAACGACACGGCCGAGGAAGTGCTGGCAGCGAGA AAGGCAGCCGAGCATGGTTAA
Upstream 100 bases:
>100_bases AACCCGGCATCGCAGCGCGACATGATCGACTCGATCACCGACATCATCGTGCACATGCGCTACACGGCGAAAAGTCGTTA ACCGACAGGGATCAAGCGTC
Downstream 100 bases:
>100_bases TAGCGCGGTACATTCCCACACGCCGGAACTGCTCGTTTCCGAGGTTCGTGGGCTGGTCGTGCGCCAGGTCCTCTTACATC GAACCGAAGCCGCGGAAGCC
Product: insecticidal toxin protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1446_residues MEAQSQSQNQSPQSLQPAVATPLLPKGGGAIQSIGKGWGSVGTSGAASLEVALPISPGRGYAPALSLSYQSTSGNGVFGL GWNLNTSKVARRASKGVPTYANDDLIFGPGGDVCLPERDDSGALVSTQVSRYNDHDLNATYQVVRYFSRVEGAFLRIEHW RVDIADPGFWLIHGADGSLNLYGRRTSSRIADPADMNRVAEWLLDESMNAIGEHILYEYKPEDHQGLAEDHPRNFRAQRY LSRVRYGNAKAHYVLYLWQEDSLDGLLWHFDLIFDYDQRDTRSEPPPEYDEQFTWPVRSDPHSSFAYGFELGNLRLCRQV LMFHHFPNELGEAPLLTRRLLLEHLQTTLGYNLLSAAHSQAWDGTDWRRVDQQPPVQFQYTDFSLESGIYTPLEPMAGLN DGQQYQLVDLYGDGLPGILYRDDKAWLYREPVRDTTGGADAVAYGACQPLPRIPTADSATPVRQTLTDLTGDGRLDWVVA QPGMAGFFTLNPDRSWSNYATFSAFPAEFFHPQGQMADLVGDGLSDLALIGPRSVRLYANRRADGFAAATDIPHDEDRLP LLSDSSTELVAFSDLLGTGQQHLIRIRHNEIRVWPNLGRGRFGKGQLFATLPYTYEAFDSSQVRLADLDGSGASDVLYLQ ADGFQVFMNRGGNGLAAPFDQRWPEGVRYDRFCQFSAVDLLGLGFSSLVLTVPHMAPLHWSLYYAADRAGSVRKPYLLKA SDNNLGAAGEVSYRSSAQEWLDEKNELRAAGSVAVSELPFPVHVVVRQTMQDKVTGNTLTQLFRYRQGFYDPREREFRGF GLLLQTDTETSSQDQEDFTAPVLNKTWFHTGRYPARPCTDHDRSDLLARLPGEHVLSRLDAATQTEQPITDADDATLQEM ARALSGSVLRSEVFGLDASQRPTVLYSTRSCRYLVRQLQALSAHRPYASMLPLSLEVITYRYEAEELEDPMCEHSLNLAW DRYGSTLHSVSVNYARRKKPGDAPPFADPHQQQWWEASHDDAQQQFYLNEMHAEAIYLDSPQSWRLGLPYRTRGDAMLIP ASALTPAQISYEQFADPSGPFATLPRTLTSLSVQRYIGCGDGEASFQALADAVETAELDDHALSAYERVMDSVTLAEKLV EIGYQQMPSFLPADSLNLWSVKRGFATYAGQEHFFHPTQFRPTRSHGWSLVEYDAYHLFATRITDPADCVTTAEYDYRVL QPKRIIDPNQNRQEADYDAFGRVWATSFYGTELGEAVGFPPLNRAGHYWASAGEVALQPEYALGRQASALYYDGNTVLGL VHIPLATAVLVADRYPEDLDKQIRISMASIDGFGRTLQTRQKVEDGDAYSVDEWGNLELVDGKPKIVHASPRWRISERVE YNNKGLAVRVYRPYFANSHLYVNDASIRSQNIVDKQFYDPLGRPTITITAKGWMRRQTYRVWYTISEDENDTAEEVLAAR KAAEHG
Sequences:
NA
Specific function: NA
COG id: NA
COG function: NA
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA