Definition Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome.
Accession NC_004578
Length 6,397,126

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 28871283

GI number:

Start: 4667817

End: 4670327

Strand: Direct

Name: Not Available

Synonym: PSPTO_4141

Alternate gene names: NA

Gene position: NA

Preceding gene: 28871282

Following gene: 28871284

Centisome position: NA

GC content: NA

Gene sequence:

>2511_bases
ATGAGCAGACCCACTGATTTCGCTCGACGATGGTTTCTCGCCCGAGGCTGGAAGCCGTTCGCGTTTCAGAAGGAAGTCTG
GGCGGCGGTGAAGAACGGCGAGTCCGGCCTGCTGCACGCCAGCACCGGCTCCGGCAAGACCTACGCTGTATGGTTTGCCG
CGCTCAACCGCTTCGCCAACGCCAACGCCAACACCAACACCAACACCCTCACCGCTGACGACAAGCCACGCAAACGCAAA
CCGCCCGCTGCACCGCTGAGTGTCCTGTGGATCACGCCTATGCGCGCGTTGGCTGCGGATACGGCGCGTGCGCTTGAAGC
GCCGTTGGCCGAGCTGGATATTGCGTGGTCGGTGGGGTTGCGTACCGGCGATACCAGCGGCAGCGAGCGCGCTCGTCAGA
GCCGACGCCTGCCCTCGGCACTGATCACTACACCGGAAAGCCTGACCCTGCTGCTGACCCGCGCCGATGCACAGGTCGCC
TTGTCAACGCTGAAAATGGTCGTGGTGGACGAATGGCACGAGCTGATCGGTAACAAACGTGGCGTGCAACTGCAATTGGC
TCTGGCTCGACTGCGCCATTGGAACCCGCAACTGATTGTGTGGGGTATTTCCGCAACGCTGGGCAATCAGGAGCATGCGC
AGCAGGTACTGATCGGCGACGGCGGCGTGACCGTGCAGGGCAAGATCGTCAAGCAATTGCTGGTCGATACGCTGTTGCCG
ACTGCCATCGAGCGCTTTCCGTGGGCCGGGCACATGGGCCTGCGCATGTTGCCGCAAGTGGTCGCCGAGGTGCACAGCAG
TGCCAGTTGCCTGGTGTTCACCAATACCCGGGCGCAATCGGAAATCTGGTATCAGGCTCTGCTCGAAGCGCGCCCCGACT
GGGCCGGGCTGATTGCCCTGCATCATGGATCGCTGGCCCGGGAAGTCCGTGACTGGGTCGAGCGCGCCTTGAAGGAAGGT
GTGCTCAAGGCCGTGGTGTGCACCTCAAGCCTGGACCTGGGCGTGGATTTCCTGCCCGTCGAACGCGTACTGCAAATCGG
CTCACCCAAAGGCGTCGCCCGCCTGATGCAACGCGCCGGGCGTTCAGGCCATGCGCCAGGCCGCCCTTCACGCGTGACGC
TGGTGCCCACCCACAGCCTGGAACTGGTCGAAGCCGCCGCCGCCCACGATGCCGTGGCAGCCAGAATGATCGAGCCGCGT
GAATCCCCCCACCAGCCACTTGATGTGCTGGTGCAGCACCTGGTCAGCATGGCGCTGGGCGGCGGTTTTCTGCCCGACGA
GCTGCTGGTGGAAGTGCGCAGCGCATGGGCCTACCGCGACCTCAGCGATGACCAATGGCAATGGGCGCTGGCGTTCGTGC
GCAACGGCGGTCACTCGCTGACCGCTTACCCGGATTACCGCCGCGCCGAACCGGACGAACACGGTGTCTGGCGTGTTCCC
GATGCGCGTCTGGCCCGTCGGCACCGCATGAGCGTCGGTACCATCGTCAGTGAAGCCACCGTCAACCTCAAATACTGGAA
AAAAGGCGGCGGTGGCGGCTCGCTGGGCAGCGTGGAGGAAGGCTTCATCGCCCGGCTCAAGCCCGGCGACGGCTTTCTGT
TCGGCGGGCGTTTGCTGGAGTTGGTGCGGGTGGAAAACATGACCGCCTACGTCAAGCGTGCCACCGGCAAGAAAGCCGCC
GTGCCCCGCTGGAATGGTGGACGAATGCCGTTGTCCAGCGAGCTGGCAAACGCCGTGGTAGAGCAATTCGATGCCGCCGC
ACGAGGTGAATTCAATAGCCCGGAAATGCAGGCCATCAAGCCGCTGCTGGAAGTGCAGCAGCAATGGTCGGGCCTGCCGC
AACGCGACACGCTGCTGGCCGAAACGCTAAAATCCCGCGAAGGCTGGCACCTGTTTCTTTACCCGTTCGCTGGCCGCCAT
GTGCACCTGGGGCTGGGCAGCTTGCTGGCATGGCGCCTTAGCCGCTATCAGCCGCTGACCTTCTCGATCGCGGTCAACGA
CTATGGTCTGGAGCTGCTCAGTGCCAGCGAGATTGACTGGGCGCAAGCATTGCAAGGCGATCTTTTCAGCGAAACCGATC
TACTGGCGGACATTATCGCCAGCCTGAACGCGGGCGAGCTGGCCTTGCGACGCTTTCGTGAAATCGCCCGGATCTCGGGG
CTGGTGTTTTCCGGCTACCCGGGAGCGGCCAAGAGCAATCGTCAGCTTCAGGCATCCAGTGGTTTGTTTTTTGAAGTATT
CAAACAGTACGACGCCGAGAACATGCTGCTGACTCAAGCCGAACAAGAGGTGTTGCGCCAGGAACTGGACTTGCAACGCC
TGGAGCTGACCTTGCGCCAGATCAACAGTCGGACGCTGGACCTGCATGCGATAAAACGCGCCACGCCGCTGGCGTTTCCG
CTGCTGGTCGAGCGTTTTCGTGAGAGCCTCAGTTCGGAAAAACTCGCCGACCGCATCGCGCGCATGGTCCGCGATCTGGA
AAAAGCTGCAGGGCCGGAGCCTGAACGATGA

Upstream 100 bases:

>100_bases
AGTTAGATGTGTGTCTAACGATGAGCCCCATAACCATTTAAAACTATTACCCTTTCTTCGCTGTCTCTGATTTAACGCCA
CTCAGAGCATACGCAAACGG

Downstream 100 bases:

>100_bases
ATCCTTACCTCGCGGTCACGCTGGCGGGCGCAGAATTATGGCTGTTGGCCGACAAGGCTATTTATTACCCCCTGGAGCGC
GCTTTGCTGATCGCAGACGC

Product: helicase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>836_residues
MSRPTDFARRWFLARGWKPFAFQKEVWAAVKNGESGLLHASTGSGKTYAVWFAALNRFANANANTNTNTLTADDKPRKRK
PPAAPLSVLWITPMRALAADTARALEAPLAELDIAWSVGLRTGDTSGSERARQSRRLPSALITTPESLTLLLTRADAQVA
LSTLKMVVVDEWHELIGNKRGVQLQLALARLRHWNPQLIVWGISATLGNQEHAQQVLIGDGGVTVQGKIVKQLLVDTLLP
TAIERFPWAGHMGLRMLPQVVAEVHSSASCLVFTNTRAQSEIWYQALLEARPDWAGLIALHHGSLAREVRDWVERALKEG
VLKAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLMQRAGRSGHAPGRPSRVTLVPTHSLELVEAAAAHDAVAARMIEPR
ESPHQPLDVLVQHLVSMALGGGFLPDELLVEVRSAWAYRDLSDDQWQWALAFVRNGGHSLTAYPDYRRAEPDEHGVWRVP
DARLARRHRMSVGTIVSEATVNLKYWKKGGGGGSLGSVEEGFIARLKPGDGFLFGGRLLELVRVENMTAYVKRATGKKAA
VPRWNGGRMPLSSELANAVVEQFDAAARGEFNSPEMQAIKPLLEVQQQWSGLPQRDTLLAETLKSREGWHLFLYPFAGRH
VHLGLGSLLAWRLSRYQPLTFSIAVNDYGLELLSASEIDWAQALQGDLFSETDLLADIIASLNAGELALRRFREIARISG
LVFSGYPGAAKSNRQLQASSGLFFEVFKQYDAENMLLTQAEQEVLRQELDLQRLELTLRQINSRTLDLHAIKRATPLAFP
LLVERFRESLSSEKLADRIARMVRDLEKAAGPEPER

Sequences:
NA

Specific function: NA

COG id: COG1201

COG function: function code R; Lhr-like helicases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA