Definition Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome.
Accession NC_004578
Length 6,397,126

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The map label for this gene is Not Available

Identifier: 28871227

GI number:

Start: 4594116

End: 4598948

Strand: Direct

Name: Not Available

Synonym: PSPTO_4084

Alternate gene names: NA

Gene position: NA

Preceding gene: 28871225

Following gene: 28871231

Centisome position: NA

GC content: NA

Gene sequence:

>4833_bases
ATGATATTCAACACAAAAGATTTTGGAGCTTTGGGCGACGGCGTCACGAACGATACAGCAGCAATTCAGGCTACGATCGA
TGCGGCCGCAGCGGCGGGGGGTGGTGAAGTGGTTCTGGCGGCAGGGACCTACATCGTGTCCGGTGGCGAAGAGCCTTCCG
ATGGCTGCCTGATGCTCAAGAGCAACGTCACCCTGTCAGGTGCCGGCATGGGCGAGACGATCATCAAACTCGCGGACGGC
TCGGACACCAAAGTCACCGGCATCGTCCGCTCGGCCTACGGTGAAGAAACCCACGACTTCGGCATGAACAACCTCACGCT
GGACGGTAATCGGGACGCCACCACCGGCAAGGTGGACGGCTGGTTCAACGGGTACATTCCGGGCTCTGACGGCAAGGACT
CGAACGTCACCCTGGACAGCGTCGAAATCAAGGATTGCTCGGGATACGGGTTCGACCCGCACGAGCAGACCGTCAATATG
GTGATCAAGAACAGCGTGTCCCACGGCAACGGCCTGGACGGCTTCGTGGCCGATTACCTGAGCGACAGCGTGTTCGAGAA
CAACGTCGCGTATAACAACGATCGTCACGGCTTCAACGTGGTGACCAGCACCCACGACTTCACCCTGAGCAACAATATCG
CCTACGGCAATGGCAGCACCGGCATCGTGGTGCAGCGCGGCAGCGAAAACATTCCTTCCCCCGCCAACATCACCATCACC
GGCGGCGCGGTCTATGGCAACGGTGCCGAAGGCGTGCTGATCAAGCTGTCCAGCCAGGTGTCGGTCAGCGGCCTGGACAT
TCACGACAACGGCAGCGCGGGCGTGCGCATTTATGGCAGTTCCGCGGTGGATGTCTTTGATAACACGCTGAGCAACAACT
CCCTCGGCGCACCGGTGCCGGAGATCATCATTCAGTCCTATGACGACACCACTGGTGTCTCCGGCAAGTACTTCAACGGC
AGTGACAACCTGATCCGTGGCAACCTGATCACCGGCAGCGACAACTCTACCTACGGCGTGGCCGAGCGCAACGAAGACGG
CACCGATCGCAACAGCATCGTCGGCAATACCATCAGCCACACCAGTAAAGGCCTGACGCTGGTTTACGGTGATGGCAGCT
TTGCGGGCGATGCGTTCCCGCTGGTCACCGTGCTGGGCACAGAGGCCAACGACGTTATTACCGGCGGTGCGGCACACGAG
CTGATCTTCGGTCTGGCGGGCAAAGACACGCTCAACGGCGGCACGGGCGACGACATTCTGGTCGGCGGTGCCGGGGCCGA
CAAGCTGAACGGCGGCGCGGGTGCCGATACCTTTCGCTTCGATCAACTGACCGACAGCTATCGCACGGCGACCACCAGCG
CTACCGACCTGCTCACTGACTTCAACGTCAGCCAGGACCGCATCGATCTGGCGAACCTGGGCTTCACCGGGCTGGGCAGC
GGCAAGAATGGCACGCTGAATATCAGCTACAACGCCACCTTGGACCGCACCTATGTCAAGTCTCTGGACGTCGATGCAAG
CGGCAACCGGTTCGAGCTGGGCCTGACCGGCAACCTGAAAGATACACTCAATGCCAGTCACTTCATCTTCCAGCGCGTGA
CGGAAGGCACCGCAGGTGGCGATACCCTGACCGGTACTGCGGGCAACGATGTCATCAACGGCAATGCCGGCGTGGACCGC
ATCGATGGCGGCGCGGGGGCAGACACGATCAATGGCGGTGCCGATGCCGACACACTGACCGGGGGCGCAGGTGCCGACGT
TTTCGTCTACAGCTCGCGCCTGGACAGCTACCGCAATTACACCGCTGGCGGGCCGAAGCAGAGCGACACCATCGTTGACT
TCAACGTCGCCGAAGACCGCATCGACCTTTCCGCCATTGGCCTGCGCGGGCCGGGCGATGGCAGCGCGAACACCCTTTAC
CTGTCGCTGAACGGCGATGGCAGCAAAACCTACGTCAAGACCAATGCGGTTGACACCACCGGCAATCGTTTCGAGATCGC
CCTGGAAGGCAATCTGCTCGACAAACTCGGCGCGTCCAACTTCATCTTCTCCAGCGCATCGGCCACCAATCAGGCACCGG
TGCTCAACACGCCGCTGATGGACCAGATAGTTACCGAACTGAAACCGTTCTCGTACGCCGTGCAGCCTGGTAGTTTCAGC
GACCCGGACAGCACCGCGCTGACCTACAGCGCGACACTGGCAGATAACAGCGCCCTGCCCGACTGGCTGAAATTCGACAG
CAAGACCCTGACATTCAGCGGCACACCAGGTGGCACAGCTTCAGGGCTCTATTCCGTGCTGCTGACAGCCAGCGACGCGA
CAGGCGCTTCGGTGGCGGACAGCTTCGCGATCAATGTGGGCAACGTCGCACCGGGCATCATCACCGGCACCGAAAGCGCC
GAAGCGCTTTATGGCACCGAGGGTAACGACACATTGCTGGGCCTGGGTGGCGACGACACCTTGCGCGGCGATACCGGCGC
CGACGTGCTCAACGGCGGAGCGGGCCGCGACGCTTTGTATGGCGGCGCCGATACTGACACGTTCGTCTACAGCACGCTCA
CCGACAGCTACCGTGACTACGACGCAAGCGGGCTGACCGCGACGGACACAATCTTCGATTTCACCCCCGGTCAGGACAAG
ATCGACGTCTCCGCCTTGGGCTTTCTGGGGCTGGGCAACGGAGAAAACCACACGCTGTACATGACGCTCAACGAGGCGGG
CGACAAGACCTACGTCAAATCCGCTACTTCCGATGTCGAAGGCAATCGCTTTGAAATCGCCTTGAGCGGCAACCTGATCA
ACACCCTGACTGACGCAGACTTTGTGTTTGGCCAACGTGAGTCTCAGGAGATTCTTTATTTGCCGACGCTGGGCCAGTCC
AACGCGCGCCTGCTGCGCATGACCGAGGACGACAACCAGTCCGGCACCTCGGAAATGGCCAAGGACCTGACCCGCTATAC
CGATTACGACGTGCGCAGCCAGTTCAACGACGCCAACGGTGATGCCATCGACCTGGCGGTAGGCGGCAGCACCGTCGTCG
GTTACTCGACCGGCACCCCGGAAGAGCAGCGTATTTCCTGGTGGCTGACCGATACCGATCAACCTGGCCAGGCGCTGCTG
CGTGCCACCGAGCTGCTTAAGGCGCAACTGGCGTCGTTGACGGCCATCGACAAAGTCACCACCGGCATTATCTGGGGTCA
GGGCGAAGAAGCCGCTCAGGAAATAGCCCGGGCCACTGATAAACAAGCTGCGGCCGACCTGTACAAGGCATCGACCCTTA
AGGTGTTCGACTACTTGCACGCGCAGATAGGCGACTTCACGGTGTACCTGGCAGAAACCGGCCATTACCAGGCACAGGCA
GCCGAAGCACGCGGCTACCCTCAGGAAAAAATCAACGCCATTGTCGAAGGTGCGGGTTATGTCCGCGCCGCTCAGGAAGC
CATCGCCAGCGAACGCAGCGACATCAAACTGGCGGTTGACTACACCGACCTGCCCTTGCGTTACGAGGTCAACTCGCTGG
TTTACCCGGATGACGTCTGGCACCTGCATGAAGAGTCGGCAGAGATCGTCGGTCAGCGACTGGCCGACTTCATTGCCGAC
GACCTGGGTTTCAGGGGCAACGCCAGTGACAACAATGACCCGGCGGCCATTTTTGCGGGCGGCCAGAACGAAGGTGGCAA
CATTTTCGGCACCAGTGACGATGACACGCTGATCGGCAGCGCCGGCAACGACATACTGGACGGCGATCAGGGTGCAGACC
AGATGACGGGAGGCGATGGCAACGACATCTATGTGGTCGACAACTCGCTGGATACCGTCACCGAGAGCAATGACTCGCCG
TCGCAGGTCGATACCGTGGTGTCGTCTGTCAGCTGGACGCTGGGGGCCAATGTCGAAAATCTGCTGCTTACCGGCGTGTC
TGCCATCGACGGCACCGGCAATGCGCTGAAAAACGTGATCACGGGTAACAGCAGCGACAACGTTGTGGACGGCGGAGCCG
GAGGCGATTTGCTGAAAGGTGGCGACGGCTCCGACAGCTATTACGTCGATGACGTGGCAGACCGCGTGGTCGAGACCAAC
AGCGATGCGTGGGTCGGCGGCGTCGATACGGTGTACAGCGCGCTGGCGAGTTATACGCTGGGGGCCCATCTGGAAAACAT
CGCGATCACCCGTACAGACACTGCCAACGCCACCGGCAATGCCTTGGATAACGTGCTCTACGCGGGCGCTGGCGACAATG
TTATGGGTGGGCGTGACGGCAATGACACGGCGTCGTACCTGTTCGCCAGCGCCGGGGTCACGGTCGCGCTGAACACCAGC
GCCCAGCAAGCCACCGGCGGTTCTGGCCTGGACACCCTGAAAGGCACTGAAAACCTGACCGGCAGCCAGTTTGCCGACTC
GCTGACGGGCAACAAGAACGCCAACGTGCTGAACGGTGGCGCTGGCAACGATACGTTGTCCGGGGGCGCAGGCGACGATG
TGTTGATCGGGAGTTCCGGTGCGGACACTTTGATCGGTGGCACCGGGGCGGATCGCTATGTGTTCAACAGCATCGACGAG
GTGGGCCGTGACGGCTTGCGCGACATCATCAATGGTTTCAAGGTGAGCGAAGGCGACAAACTGGATTTCACAGGCTTCGA
TGCCCGACCGCTTACTGATACCCACGATGCGTTCACGTTCATCGGCAACTCGGCGTTCAGCGCCAACAACACCGGCGAGC
TTCGCTTTGCCGATGGCGTGCTGTACGGCAATGTCGATGACAACACCGGGGCGGACTTCGAAATCCAGCTAACGGGTGTG
CAGAGCCTGCAGGCGGCTGACGTCATCGTCTGA

Upstream 100 bases:

>100_bases
TAGCCTATATCACGCAACTTTTCCTGAATAAGGGGTCTTACACCGGGGCGCTGCAATATTGACTTCATTACCTAAAATCT
TCGTCGCCTGGAGTAACGCT

Downstream 100 bases:

>100_bases
TAGCGACCATGTTCCGCGCTCACGGTTGAATCTCAACTATCGTGCGACGCCCTTTTAGCTATCGTGCGACGCTCTGCGTC
GCATGCCGTTCTGGACGCTC

Product: mannuronan C-5-epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1610_residues
MIFNTKDFGALGDGVTNDTAAIQATIDAAAAAGGGEVVLAAGTYIVSGGEEPSDGCLMLKSNVTLSGAGMGETIIKLADG
SDTKVTGIVRSAYGEETHDFGMNNLTLDGNRDATTGKVDGWFNGYIPGSDGKDSNVTLDSVEIKDCSGYGFDPHEQTVNM
VIKNSVSHGNGLDGFVADYLSDSVFENNVAYNNDRHGFNVVTSTHDFTLSNNIAYGNGSTGIVVQRGSENIPSPANITIT
GGAVYGNGAEGVLIKLSSQVSVSGLDIHDNGSAGVRIYGSSAVDVFDNTLSNNSLGAPVPEIIIQSYDDTTGVSGKYFNG
SDNLIRGNLITGSDNSTYGVAERNEDGTDRNSIVGNTISHTSKGLTLVYGDGSFAGDAFPLVTVLGTEANDVITGGAAHE
LIFGLAGKDTLNGGTGDDILVGGAGADKLNGGAGADTFRFDQLTDSYRTATTSATDLLTDFNVSQDRIDLANLGFTGLGS
GKNGTLNISYNATLDRTYVKSLDVDASGNRFELGLTGNLKDTLNASHFIFQRVTEGTAGGDTLTGTAGNDVINGNAGVDR
IDGGAGADTINGGADADTLTGGAGADVFVYSSRLDSYRNYTAGGPKQSDTIVDFNVAEDRIDLSAIGLRGPGDGSANTLY
LSLNGDGSKTYVKTNAVDTTGNRFEIALEGNLLDKLGASNFIFSSASATNQAPVLNTPLMDQIVTELKPFSYAVQPGSFS
DPDSTALTYSATLADNSALPDWLKFDSKTLTFSGTPGGTASGLYSVLLTASDATGASVADSFAINVGNVAPGIITGTESA
EALYGTEGNDTLLGLGGDDTLRGDTGADVLNGGAGRDALYGGADTDTFVYSTLTDSYRDYDASGLTATDTIFDFTPGQDK
IDVSALGFLGLGNGENHTLYMTLNEAGDKTYVKSATSDVEGNRFEIALSGNLINTLTDADFVFGQRESQEILYLPTLGQS
NARLLRMTEDDNQSGTSEMAKDLTRYTDYDVRSQFNDANGDAIDLAVGGSTVVGYSTGTPEEQRISWWLTDTDQPGQALL
RATELLKAQLASLTAIDKVTTGIIWGQGEEAAQEIARATDKQAAADLYKASTLKVFDYLHAQIGDFTVYLAETGHYQAQA
AEARGYPQEKINAIVEGAGYVRAAQEAIASERSDIKLAVDYTDLPLRYEVNSLVYPDDVWHLHEESAEIVGQRLADFIAD
DLGFRGNASDNNDPAAIFAGGQNEGGNIFGTSDDDTLIGSAGNDILDGDQGADQMTGGDGNDIYVVDNSLDTVTESNDSP
SQVDTVVSSVSWTLGANVENLLLTGVSAIDGTGNALKNVITGNSSDNVVDGGAGGDLLKGGDGSDSYYVDDVADRVVETN
SDAWVGGVDTVYSALASYTLGAHLENIAITRTDTANATGNALDNVLYAGAGDNVMGGRDGNDTASYLFASAGVTVALNTS
AQQATGGSGLDTLKGTENLTGSQFADSLTGNKNANVLNGGAGNDTLSGGAGDDVLIGSSGADTLIGGTGADRYVFNSIDE
VGRDGLRDIINGFKVSEGDKLDFTGFDARPLTDTHDAFTFIGNSAFSANNTGELRFADGVLYGNVDDNTGADFEIQLTGV
QSLQAADVIV

Sequences:
NA

Specific function: NA

COG id: COG2931

COG function: function code Q; RTX toxins and related Ca2+-binding proteins

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA