Definition Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome.
Accession NC_004578
Length 6,397,126

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Identifier: 28870896

GI number:

Start: 4225753

End: 4227606

Strand: Direct

Name: Not Available

Synonym: PSPTO_3741

Alternate gene names: NA

Gene position: NA

Preceding gene: 28870888

Following gene: 28870899

Centisome position: NA

GC content: NA

Gene sequence:

>1854_bases
ATGTCTCAACCCAGCGCTTCGCTTGCTCACGACCTCATCATTCAGGATTCATGGACTCGCTGCCGGGACTTCGGTCTCAG
CCATCAGACGCGTCCATCGTTCGGCCAGCTGCCGGGCGCAGAGGTTTCCCGGCTGCTGGAACGCCATCACGGTCTGGTGC
AAACCACCCATCAGGAGGTGTTGCCGGTCTATGAAAACATCCTCAGCAACTCCAATTGCCTGATCATGCTGGCCGACACT
GATGGCCAGTTACTCAAGTCGTGGGGCAATCAGCGTTTCGTCGAAGCTTCGCAAACCCTGGGCTTCCTGGCCGGAGCCAG
TTGGAGCGAACGCGGCACCGGCACCAACGCCATCGGCACGGCGCTGGCCTGCGAACAGGCGATTCATATCGAGCCGGATG
AACACTTTCTCAAAGCCAACCGGTTCATGACCGGTTCTGCTTCGCCGATCTTCGATGCCGATCGGCGCATCATTGCCGTA
CTGGATGTGTCGAGTGACAGCTTCCTTCCCCCTTCGCACACGCTGGGCATGGTCAAAATGATGAGCCAGTCGGTGGAAAA
CCGCCTGATCCTCGATCAGTTCCGCGACACGCATTTCCAGCTGATCTTCAATACAGCCCTGAACAACCTCGACAGCCAGT
GGGCAGGCCTGCTGATTTTCGACGAAAGCGGCCGGATTCTCTGCGCTAATCGCCGCGCCGACAATTTGCTGGGCACCCGG
CTTTCTGGTGTCAATATCGAGACGCTGTTCAAGTGCCCGATTCTGCAACTGCTGAGCGAGACGCAAGCGCGCCCCTTCGC
GCTGCATGCGTTTGGCAACAATCGCTTTCAATGCCTACTCAAGCGTCCGACTCGCAAGCCGCTCAAGCTGCACAGCGTAA
AGCCCGCTCAGGCACCTGTTGCGCCGCGCAGCCTCGATCTGGAGGCGATCAGCCTCGGCGATGCAAGAATCGAGAAAGCC
GTGCTCCAGGCGCAGCGCCTGCTGGAAAAAGACATACCGTTGTTGATTCACGGGGAAACCGGGGTGGGCAAGGAAGTGTT
CGTCAAAGCGCTGCATCAGGCCGGTTCGCGCGCCAGCGAGCCACTGATCGCGGTGAACTGCGCGGCAATTCCGGCCGATT
TGGTCGAGGCCGAGCTGTTTGGCTACGAGAGAGGCGCGTTTACCGGCGCAAACCAGAAAGGCAGCATCGGGCTGATTCGC
AAGGCCGATAAAGGCACGCTGTTTCTCGATGAGGTCGGCGACATGCCGATGCCGGTGCAGGCGCGATTGCTACGGGTGTT
GCAGGAGCGCTGCGTTCAACCACTGGGCAGCAGCGAGTTGTATCCGGTAGACATACGGCTGATATCCGCCACCAACCGAA
CCCTGCGTGATCAGGTGCAGACCGGGCATTTTCGTCAGGACCTTTATTATCGAATCAGCGGGCTCAACATCGAATTGCCA
CCATTGCGCGAGCGCACCGACAAACATGCACTCATCCAGCGTATCTGGGAGCGGCATCGCGACGCGCATCAACGGGCGGG
GTTTTCCCGAGAGGTGCTTGAGCTGTTTGAACACCATCCCTGGCCGGGCAATATTCGCCAGCTCAACAGCGTGATTCAGG
TGGCACTGGCATTGGCGGACGAGCAGCCGATCAGTGCCGAACACCTGCCGGAAGACTTTCTGCTGGATGTGGGCATGGAT
GAGGAATGCCGGGAGACGGCGCAAGCCCGTCAATCGCCCTACCGACAGTCGTCGACGCAAGACCTGAGCCACCAGTTGCA
GGCCGCGGGCGGAAATATTTCACTGCTGGCCAAACAGTTGGGCGTGAGCCGCAACACGCTGTACAAGCGGTTGCGGGAAC
AGCGGATTGTTTAG

Upstream 100 bases:

>100_bases
GAGCGAATCTGAACGACACTGGACGGACGTTGCGGGCAAGGATGGTCACGCCGACGGGACCTAAAAACAAAAACAATACG
TCATATTCGCAGGCATCCTC

Downstream 100 bases:

>100_bases
CTTTTGAGCTCGGCAGGCCGCACAGCGAAGATGGGACAAGAACAGCATACCCACGCGGAGCATGGGCACGACAGTGTTTC
AGGGATAGTCCTTTATCGTT

Product: sigma-54 dependent transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>617_residues
MSQPSASLAHDLIIQDSWTRCRDFGLSHQTRPSFGQLPGAEVSRLLERHHGLVQTTHQEVLPVYENILSNSNCLIMLADT
DGQLLKSWGNQRFVEASQTLGFLAGASWSERGTGTNAIGTALACEQAIHIEPDEHFLKANRFMTGSASPIFDADRRIIAV
LDVSSDSFLPPSHTLGMVKMMSQSVENRLILDQFRDTHFQLIFNTALNNLDSQWAGLLIFDESGRILCANRRADNLLGTR
LSGVNIETLFKCPILQLLSETQARPFALHAFGNNRFQCLLKRPTRKPLKLHSVKPAQAPVAPRSLDLEAISLGDARIEKA
VLQAQRLLEKDIPLLIHGETGVGKEVFVKALHQAGSRASEPLIAVNCAAIPADLVEAELFGYERGAFTGANQKGSIGLIR
KADKGTLFLDEVGDMPMPVQARLLRVLQERCVQPLGSSELYPVDIRLISATNRTLRDQVQTGHFRQDLYYRISGLNIELP
PLRERTDKHALIQRIWERHRDAHQRAGFSREVLELFEHHPWPGNIRQLNSVIQVALALADEQPISAEHLPEDFLLDVGMD
EECRETAQARQSPYRQSSTQDLSHQLQAAGGNISLLAKQLGVSRNTLYKRLREQRIV

Sequences:
NA

Specific function: NA

COG id: COG3284

COG function: function code QK; Transcriptional activator of acetoin/glycerol metabolism

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA