Definition Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome.
Accession NC_004578
Length 6,397,126

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 28870341

GI number:

Start: 3560854

End: 3563547

Strand: Direct

Name: Not Available

Synonym: PSPTO_3170

Alternate gene names: NA

Gene position: NA

Preceding gene: 28870340

Following gene: 28870345

Centisome position: NA

GC content: NA

Gene sequence:

>2694_bases
GTGTCAGCGTTCAAACAGACCCTGGGCCTGAGCCTGCTGACGTTCAGCGTCATGCAGGCCCACCTCGCGCTCGCCGCAGT
GACACCGGCCACCGGCAACGCAGTCGAAGCCCGCGTCAGCTCGATTCTCGACAACATGAATCAGTCCGAGAAGATCAACT
TTACCCGCGTGAATGACGGGCACATGATCCCTTCTCTACTCAAGTGGGGCATCAAGGGCACCGTGGCGTATGACTCGTCG
ATGGGCGTGCACGTCAACAACGCCACCTTTGGCGCGCAGTACCCGTCGCAGTCCGCGCTGGCTGCCACCTGGAGCATCAA
CCGGGCCAAGGAATTCGGTCTGGCCATTGCCTACGAGACGCGTATTTCCGGTGGCCAGCAGATGCTCTCGCCTGGCGCAA
ACCTGTACCGCACCCCGTACAACGGCCGCTCGGCAGAGTACGTCAGTGGCGAGGACCCGTTCCTCGGCGCGGTCATGGCA
CCGGCCATCGTCAACGCCATTCAGGCGCAAGGCATTCAGGCCAGCGGCAAGCATTACCTGGCCAACGAGCAGGAAGCCAA
TCGCCAGGCCGTCGACGTCAAGGTCGATGAGCGCACCCTGCGCGAACTGTATTTGCCGGGCTTCGAGTCGATGGTCAAGA
ACGCCAACGTGGCGTCGATCATGTGCGGTTTCAACAAGGTCAATGGCGACTACGCGTGCGAAAACCATCACCTGATCACC
GAGGTGCTCAAGGGTGAATGGGGCTATCAAGGCACGGTAATCAGTGACTTCAACGCCATTCACGACGCGTTCAAGGGCGC
TTGGGCCGGCACCGACATCGATATGCCGTCGGGCCTGCAATTCACCGAAGCCAAGCTGCTGCCTTACCTGTGGAGCGGGC
AACTGACCCAGAACGTGATCGACGACAAGGTCAAGCGCAACCTGCGGGCCATCGTCAGCTACGATTTCCAGGAAAACCTT
AATACCGCCAAGACCCTGGACCACCCCGAGTACGGCATGCGCGCAGCGCTGAATACCGCGCGTGAGTCCATCGTTCTGCT
GCGTAACGAAAACACTGCGGCGGGCAAACCGCTGCTGCCACTGGCGCGCTCGGCGAAGATCGCCGTGATCGGCAACTGGG
CACATGAAACACCTGCGTCACCATTCGGCACGGCCAACTCGCCGCCCAACAGCTACGTCACCGAACTGAGCGGCCTGCAG
CAACTGGCGTCCAACAGCACCGACGTCACCTACCTCCCGGAAATGAGCCTGAACCCGGCGAATTCGACCTGGTATCAGCC
AGCCACGGGTAACAACAGCATCAGCAATTCCGGGGTTAAAGCCGAGTATTTCTCCAACACCAGCTTTTCCGGCGATCCGG
CACTGACGCGCGTCGAGCCAGGCGTAAACCTGAACTGGGCCACCGGCACCAACGTCACCAATGCGGGCAGCACGGCCGTG
TCGGGCTTTAGCCCTTCAGCCGGTGCCTTCTCGGCCCGCTTCACGGCGACCATCAAGCCGACTGTCTCGGGCGCACAGGT
GTTCAAGGTTCGCGCCGATGGCCCTTACAAGCTGTGGGTCAACGATGAGCTGGTACTGCAGAGCGATGGCGTGCCTTACT
CAGGCGACGTCGTGAACGCGCTGACAACGTCGGGGAAAACTGCTGAATTGAGTGCTGGCAAGACCTACACCGTAAAACTT
GAATACCAGCGCATTCAGGGCAATTTCATTCCTGTGCTGGGCGGCCTGACCGGTGTGCAGATGAGCTGGGCATCGTTGCG
TCCGCCGAAGGATCTGTCGAGCTACGATGCGGTCGTGGTTGCCACCGGCACTACGTCTGAAAACGAAGGCGAAGGTTCTG
ACCACGGTTTCGATCTGCCTGACCAGCAAGCAGAGCTGATCAGCTACGTCACCAAGGCCAACCCCAATACCATCGTGGTC
ATGCATGGCGGTGGTGTGGCCAACATGCAACCGTGGGCGAACAAGGTCGGCGCGACGCTGCAAGCCTGGTTCCCGGGTCA
GCAAGGCGGGCAGGCTCTGGCCGAGATTCTGTATGGCAAGGTCAACCCGTCGGGCAAACTGCCGATCACCATCGACAAGA
AAATCGAGGATAACCCAAGCTACGCGTCCTACCCGGACCCGGCGGCCTATCGTGGCGACAATGCTCTGACCGAAATGACC
TACAGCGAAGGCCTGTACATGGGTTATCGCGGTTATGACAAGAAGCACGCCAAGCCGCTGTACCCGTTCGGTTACGGGCT
GTCCTACACCACGTTCAGCTACAGCGACCTCAAGCTGTCGACCAACGTGCTGACCCCGGGCGCGACGATTGACGTCAAGT
TCACCGTGACCAACACCGGCGACAAGGCAGGCTTTGAAGTGGCACAGCTTTACGTGCAACCGGTAAAACCGGCTGTAGAC
CGTCCGGAGAAAGAGCTCAAGGGCTTTACCAAAGTCTATTTGCAGCCCGGTGAGAGCAAGACGGTCAGCGTGCCGATCGA
CTCGCGTTCGCTGGCCTACTACGTCGACAAGACCGCAAGCTGGGACGTTGACGCCGGCAAGTTCAAGATTCTGGTGGGTG
CAGATTCGGAGAACCTGACCCTCGACCGGACCCTGATTACCCTGTACCCGGAAAAGCTGACCACCCGCGACAGCAACCCG
CTGCCGTTGCCACTGCGCAAGGCAGTACAGGTCAGCGCGGCACAGACGTACTGA

Upstream 100 bases:

>100_bases
TGCTCGATACGCCGGTGGACACCGACGATGCACCTGCGCAGGCACAACGCCCATGAACAGTTCTAATCAACCTTTCGCAT
CGACCAGAAGGACACTTGCC

Downstream 100 bases:

>100_bases
TCCACCCTTCAAGGCTCAGGGATGAGCCTTGATATCCCTTCCCAGACGCTGCACGTAAACCTCGAACACCGCCATGACAT
CCACGTCGTCCGGGCTTCTC

Product: glycosyl hydrolase, family 3

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>897_residues
MSAFKQTLGLSLLTFSVMQAHLALAAVTPATGNAVEARVSSILDNMNQSEKINFTRVNDGHMIPSLLKWGIKGTVAYDSS
MGVHVNNATFGAQYPSQSALAATWSINRAKEFGLAIAYETRISGGQQMLSPGANLYRTPYNGRSAEYVSGEDPFLGAVMA
PAIVNAIQAQGIQASGKHYLANEQEANRQAVDVKVDERTLRELYLPGFESMVKNANVASIMCGFNKVNGDYACENHHLIT
EVLKGEWGYQGTVISDFNAIHDAFKGAWAGTDIDMPSGLQFTEAKLLPYLWSGQLTQNVIDDKVKRNLRAIVSYDFQENL
NTAKTLDHPEYGMRAALNTARESIVLLRNENTAAGKPLLPLARSAKIAVIGNWAHETPASPFGTANSPPNSYVTELSGLQ
QLASNSTDVTYLPEMSLNPANSTWYQPATGNNSISNSGVKAEYFSNTSFSGDPALTRVEPGVNLNWATGTNVTNAGSTAV
SGFSPSAGAFSARFTATIKPTVSGAQVFKVRADGPYKLWVNDELVLQSDGVPYSGDVVNALTTSGKTAELSAGKTYTVKL
EYQRIQGNFIPVLGGLTGVQMSWASLRPPKDLSSYDAVVVATGTTSENEGEGSDHGFDLPDQQAELISYVTKANPNTIVV
MHGGGVANMQPWANKVGATLQAWFPGQQGGQALAEILYGKVNPSGKLPITIDKKIEDNPSYASYPDPAAYRGDNALTEMT
YSEGLYMGYRGYDKKHAKPLYPFGYGLSYTTFSYSDLKLSTNVLTPGATIDVKFTVTNTGDKAGFEVAQLYVQPVKPAVD
RPEKELKGFTKVYLQPGESKTVSVPIDSRSLAYYVDKTASWDVDAGKFKILVGADSENLTLDRTLITLYPEKLTTRDSNP
LPLPLRKAVQVSAAQTY

Sequences:
NA

Specific function: NA

COG id: COG1472

COG function: function code G; Beta-glucosidase-related glycosidases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA