Definition Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome.
Accession NC_004578
Length 6,397,126

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Identifier: 28870054

GI number:

Start: 3232419

End: 3235118

Strand: Direct

Name: Not Available

Synonym: PSPTO_2872

Alternate gene names: NA

Gene position: NA

Preceding gene: 28870053

Following gene: 28870055

Centisome position: NA

GC content: NA

Gene sequence:

>2700_bases
ATGACTACTCTGACCACCAGACAGATACAACTCGCCCACGCTTGGACATCCGTTCATACAGGCGCTGGCCTGGCCCTGGA
CTGGGTCGCCGATGTGGCCGAAAAGGTCGAGGAAATCGCCACCAAGGCCGACGCCCTCAGCCGTGACTTGCACCGCGCGC
GCAACCTGTCCCGCAGCCTTGGGCGGGTCTCGACGACACCCATGGGTATCGGTTTCTTCGGCTTGTCTCAGGCAGGCAAG
AGCTACCTGATTTCCGCTCTGGCGGCGGACGAGAAAGGCCAGTTGCTGACCCGGCTGGGTACTCAGCAACTGGACTTCAT
CAAGCACGTGAACCCGGTGGGCGGCGGTAAGGAGGCCACCGGTCTGGTCACGCGGTTCACCCGCACCGCCGCGCCAAGTC
TGGACCCGCACTTTCCGGTGGAGCTGCGTCTGTTTCGCGAGGTCGAGATCGCCATCATTTTGGCCAACGCCTGGTTTGAG
GATTTCGATCATCAGCGCTTGAACAGCCAAGTCACCGATGCGCAGATCGATGCCCTTTTGCAGCGTTTCGAGGGGCAATT
GGCAGCCGCTCCGACACCTGGCGTCAGCAGTGACGACGTGGTGCTGCTATGGGATTACCTGGAGCACCATTACGCTAACG
CCATGCGCCCGCTGAACGCCCGTTATTGGCCTTGCGTGGTCAAACTGGCGCCGCGCTTGTCGGCACGCGAGCGCGCTCAA
TTGTTCGAGCCGCTGTGGGGCGGCATCGGCAAAATGACCGAAACCTATGAGCAACTGGCCTCGGCCCTGCACCGCCTGGG
GCTGGCAGAGACAGTTTTTGCGCCCATCAGCGCGCTGGTCACCGAGCGCGATGGGCAACTGGTACAAAGCAAAAGCATCA
TCAACGTCGACATTCTCAGCCGTCTTGGCGGCAGCGCGGACTCGGCCATCGAGGTACGTCCGGCCAGTGAAGGCACTTTG
CGCCCTGCCGTGTCGGTGAATCGGGCCGAACTGGCGGCGCTCACCAACGAGTTGATTTTTCGCCTGGATAACGAACCGGC
CAACGCCATCGTCAATAGCGTCGATCTGCTCGACTTCCCGGGCTACCGCAGCCGGCAGAAGCTGATGAGCATCAACGAGG
CCAGCGAAGTCGACAGCAATGGCACCGCCAACAATCCGGTCGCCAGGCTGTTGCTGCGCGGCAAGGTCGCTTACTTGTTT
GAGCGTTACACCAACGAGCAGGAAATGAACGCGCTGGTGATGTGCACCAGCACCTTCAAGCAGAGCGAAGTGGTGAGCGT
CGGTCCGGTACTCAAGAGCTGGATCGACAAGACCCAAGGCACCAGCCCCCAGCAGCGCGATGGTCGGGCCAGCGGTCTGA
TCTGGGCGTTGACCATGTGTGACGGCTTTATCGGCGGCGCGCTCAACGGCGAGGTTGTGCAGTTTCCCGAAGGTTGCGAC
AACATGCTCAAACTGACCATGATCGAGCGATTCGGCAACGAAGACTGGATGAAACAATGGGGCAGCACGCCTTTCAAAAA
CACCTATCTGGTGCGCAAGCCGCGCTTCAAGACCAGCTTCATCGAGTTGGCGGCGGACGGTGAAGAACGCGCTTACAACG
ACTCATCGCACTCTGCGTTACAGGCATTGCAACAAGCGTTCAGCAACAGTGAACTGGTCAAGCGCCATGTGGCAGAACCG
CAGGACGCCTGGCAGGCAATGCTGACACTGAACGACGGCGGCATGACTCGTTTCAGCTCGGCGTTCAGCCCGATTGCCAA
CATCGACTTCAAGTTACAGCGTATTGCCGAGCAACTGGACGAGTTGATGGTGCAATTACTGCCGCGCCTGGAGCAGTACT
ACGAAGCCGGTGGCGAAGACGAACGGGCCAGGAAGAAGGTTATCGCCAACCTGATTGCCCGCCCGTTCGCGACCACGCCG
CACGGCAAACACGTGCTTGGCGAACTGCTCGGTTACATGTCGTTGCCGGAACAGCAGTTGCGCGACCTTTACCTGAACGG
TGATTTCGCCAGCCCTGCCAGCGACGCCACTGCACCGGTGCAGGCCGTCGGCAAGCCTGAAGTGGAATACGACATATTCG
GCGAGGCCATCGCAGCCACTGCCACGGTGGAAATACCCGCGGCACCGGCCGTAGCGCCGCAATACCAGAGCCACGAACAC
CGTTTCGCCCGAGCGGCCTTCGACCTGTGGGCAACGCACCTGCGCAACCTCAGCCGTCGCCAGCACCTGCTGGACCTGTT
GGAGCTGCCTGCCGAGGCCATCGCCCTGCTGGTCAAGGAACTGGTGGTCTGCGCCGAGCGCCTGGACTTGCCATTGCAGC
TCAGCAACGCGCTGCTCAAGCGCGCCCAGAGCGGTGTGCGCAAAGAAAACCTGGTGCAGCGCCAAGTGCTGACCGCGCAA
CTGCTGCTCAACGACTTCGCCGCCTGGTTCGGGCACACCGCCCAGCCGGCGGGTCAGCGGCCAACGGGCCTGCTGGGTGC
CAAACAACCGCTGTTTGCTTTTTATCAAAAGGAAATGCCAGGGCGCTTCCCGCACCTCGCAGCGCAAGCCGACGACCAGA
GCGTGATTTTCGCCGATGACTGGATTTCTGGCATTGCCATTCATACCCAGAAAAACGTCGGCCACCGCAAGGGCAAAGAA
ATCACTCCTGAGCAGAACGAGGCCATGGGCCGCGTCATCCAGGCGTTCAAAGCGAGATAA

Upstream 100 bases:

>100_bases
CCTTCGATCGCAAGGACGTGAAACTACAGCTCTACACCATGTTGAGCGCCGAAGGTGGTGCCTCCAACTATTGGCTCGAC
AGCGGGAGCGTGAGTCCGAA

Downstream 100 bases:

>100_bases
TTCATGTCCATCACCATCAAACTCTCACCGCTGGCGAGCCCGGTTCCCGGCAGTGGCTTTCTCCAGGTACGTGGCTGGGA
GCATGACGCAGGTAATCTGG

Product: HopL1 protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>899_residues
MTTLTTRQIQLAHAWTSVHTGAGLALDWVADVAEKVEEIATKADALSRDLHRARNLSRSLGRVSTTPMGIGFFGLSQAGK
SYLISALAADEKGQLLTRLGTQQLDFIKHVNPVGGGKEATGLVTRFTRTAAPSLDPHFPVELRLFREVEIAIILANAWFE
DFDHQRLNSQVTDAQIDALLQRFEGQLAAAPTPGVSSDDVVLLWDYLEHHYANAMRPLNARYWPCVVKLAPRLSARERAQ
LFEPLWGGIGKMTETYEQLASALHRLGLAETVFAPISALVTERDGQLVQSKSIINVDILSRLGGSADSAIEVRPASEGTL
RPAVSVNRAELAALTNELIFRLDNEPANAIVNSVDLLDFPGYRSRQKLMSINEASEVDSNGTANNPVARLLLRGKVAYLF
ERYTNEQEMNALVMCTSTFKQSEVVSVGPVLKSWIDKTQGTSPQQRDGRASGLIWALTMCDGFIGGALNGEVVQFPEGCD
NMLKLTMIERFGNEDWMKQWGSTPFKNTYLVRKPRFKTSFIELAADGEERAYNDSSHSALQALQQAFSNSELVKRHVAEP
QDAWQAMLTLNDGGMTRFSSAFSPIANIDFKLQRIAEQLDELMVQLLPRLEQYYEAGGEDERARKKVIANLIARPFATTP
HGKHVLGELLGYMSLPEQQLRDLYLNGDFASPASDATAPVQAVGKPEVEYDIFGEAIAATATVEIPAAPAVAPQYQSHEH
RFARAAFDLWATHLRNLSRRQHLLDLLELPAEAIALLVKELVVCAERLDLPLQLSNALLKRAQSGVRKENLVQRQVLTAQ
LLLNDFAAWFGHTAQPAGQRPTGLLGAKQPLFAFYQKEMPGRFPHLAAQADDQSVIFADDWISGIAIHTQKNVGHRKGKE
ITPEQNEAMGRVIQAFKAR

Sequences:
NA

Specific function: NA

COG id: COG4458

COG function: function code S; Uncharacterized protein conserved in bacteria, putative virulence factor

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA