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The map label for this gene is syfD

Identifier: 28870017

GI number:

Start: 3181322

End: 3183328

Strand: Direct

Name: syfD

Synonym: PSPTO_2832

Alternate gene names: NA

Gene position: NA

Preceding gene: 28870016

Following gene: 28870019

Centisome position: NA

GC content: NA

Gene sequence:

>2007_bases
ATGAACCAGAAGGTAGACATCGAAGCGTTGCACGAAACGTCGATCAACAGCGACCAACCGCTGCTGCGCCTGCAACAGGT
CAGCCGCAGCTTCATGGCAGGCGACCGCGAATTTCAGGTCCTCAAGCACATCGACCTGGCCATTCACACCGGCGAACTGG
TGGCGATCATCGGTGCATCGGGCTCGGGCAAATCAACCCTGATGAACATTCTCGGTTGCCTGGACCATGCCAGCGCCGGC
AGCTATCAGGTCAACGGGCAGGAAACCCGCGAGCTGGATGACGATGCGCTGGCAGCGCTGCGCCGCGACCATTTTGGCTT
CATTTTCCAGCGCTACCATTTGTTGCCGCACCTGGATGCGGTTCGCAATGTGGAGATTCCGGCCATTTACGCCGGCACCG
CGCAGACCACGCGCCATGAGCGTGCTCAGGCATTGCTCACGCGCCTGGGACTGGGCGGGCATCTGCAGCATCGGCCCAGC
CAGATGTCCGGCGGTCAGCAGCAACGCGTGAGCATCGCCAGAGCGTTGATGAACGGCGGGCAGGTGATACTGGCCGATGA
GCCGACCGGCGCACTGGATACCGCCAGCGGCAAGGAAGTCATGCGCACGCTGCTGGAACTGCATGCCGCGGGCCATACTG
TGATTCTGGTAACGCACGACCCCAAGGTGGCTGCCAACGCCGAGCGGATTATCGAAGTCAGCGACGGCGAAATCATCAGT
GACCGACGCACGGCGCAGACAACGCAGCCCGCGCCCGAAGCGCAGCCAGCCACGCCGCCAGGTCCCGCGCCCAGGCGTCT
GTTGGCCAGCCTGGGGCTGTTCCGTGAAGCGTTCAATATGGCCTGGATCGCGCTGATATCGCACCGCATGCGCACCTTGC
TGACCATGCTTGGCATCATCATCGGTATCACCTCGGTGGTCTCGATCTCAGCCATTGGCGAAGGCGCCAAGCGCTATGTG
CTCAAGGACATCCAGTCCATCGGAAGCAACACCATCGACATCTATGCCGGCGCCAACTTTGGTGACAGCCGGGCCAAATC
CATCGAAACGCTGCTTCCCTCAGACGTTGCCGCGCTCAATCAGCTGTATTACATCGACAGCGCCACCCCCGTGGTCGGTC
GCAGCATGCTGGTGCGCTACCGCAACGTCGATGTGGACGCACAGCTCAATGGCGTCAGCAGCCGCTATTTTCAGGTGCGC
AACATCCAGCTGGCAGCCGGCATCACGTTCAGTGATCAGGATGCCCGGCGTCAGGCTCAGGTGGTGGTGCTCGACCACAA
CACCGCTCAACGCCTGTTCGGGCCGGGCGTCAACCCGCTGGGGCAGGTGATTCTGGTCGGCAAACTGCCGTGCACGGTGA
TCGGCGTCACCAGCGACCATAAAAACCTGTTCATCGCCGGTAACACGCTCAACCTGTGGATGCCTTATGAAACGGCGGCG
GGGCGGGTGCTGGGGCAGCGACATCTGGACAGCATCAGCGTGCGGGTCAAGGACGGCATGCCGAGCAAGGCGGTGGAAGA
GCAGATCAAGGCACTGATGCTGCAGCGTCACGGCACCAAGGACTTCTTCACCAACAACCTCGACAGCGTCATGCAGACGG
TACAGAAAACCAGCCGCTCGCTGACCCTGTTGTTGTCGCTGATTGCGGTTATCTCCCTGGTGGTGGGCGGAATCGGGGTG
ATGAACATCATGCTGGTGTCGGTGACCGAGCGCACTCGCGAAATCGGCATCCGCATGGCCGTCGGCGCGCGTCAGTCGGA
CATTCGCCAGCAATTTCTGGTCGAGGCGGTCATGGTCTGCCTGATGGGCGGGGTAATCGGTATCGGCCTGTCCTACGCCA
TCGGCTATCTGTTTACCTTGTTCGTCCAGCAGTGGGAAATGGTCTTTTCACTGGCCTCGGTGGTGACCGCATTCGCCTGT
TCGACCTTGATCGGCGTGCTGTTCGGCTTTGTGCCTGCACGCAATGCCGCCCGTCTGGACCCTATCGAAGCGCTGGCGCG
GGACTGA

Upstream 100 bases:

>100_bases
GCATCAACAACAACGTTCAGGTCGAAATAACCGGCGGGCTTGCCGAGGGCGAGCGGGTGGTAATCGGTGATCCGGCATCG
GTTGCGGCGGGGGCCTGAAC

Downstream 100 bases:

>100_bases
TGCCCTCAGCAGGGCGAATAATTGCTCTCGGACGACGCATACATCCAGCGCATCAGCGAATGCCTGCCACTGATGCCCAG
TTTGATCGCGGCACGGCGTT

Product: syringolide efflux protein SyfD

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>668_residues
MNQKVDIEALHETSINSDQPLLRLQQVSRSFMAGDREFQVLKHIDLAIHTGELVAIIGASGSGKSTLMNILGCLDHASAG
SYQVNGQETRELDDDALAALRRDHFGFIFQRYHLLPHLDAVRNVEIPAIYAGTAQTTRHERAQALLTRLGLGGHLQHRPS
QMSGGQQQRVSIARALMNGGQVILADEPTGALDTASGKEVMRTLLELHAAGHTVILVTHDPKVAANAERIIEVSDGEIIS
DRRTAQTTQPAPEAQPATPPGPAPRRLLASLGLFREAFNMAWIALISHRMRTLLTMLGIIIGITSVVSISAIGEGAKRYV
LKDIQSIGSNTIDIYAGANFGDSRAKSIETLLPSDVAALNQLYYIDSATPVVGRSMLVRYRNVDVDAQLNGVSSRYFQVR
NIQLAAGITFSDQDARRQAQVVVLDHNTAQRLFGPGVNPLGQVILVGKLPCTVIGVTSDHKNLFIAGNTLNLWMPYETAA
GRVLGQRHLDSISVRVKDGMPSKAVEEQIKALMLQRHGTKDFFTNNLDSVMQTVQKTSRSLTLLLSLIAVISLVVGGIGV
MNIMLVSVTERTREIGIRMAVGARQSDIRQQFLVEAVMVCLMGGVIGIGLSYAIGYLFTLFVQQWEMVFSLASVVTAFAC
STLIGVLFGFVPARNAARLDPIEALARD

Sequences:
NA

Specific function: NA

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA