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The map label for this gene is rnpA

Identifier: 28572958

GI number: 28572958

Start: 925397

End: 925735

Strand: Reverse

Name: rnpA

Synonym: TW817

Alternate gene names: NA

Gene position: 925735-925397 (Counterclockwise)

Preceding gene: NA

Following gene: 28572957

Centisome position: 99.98

GC content: 38.35

Gene sequence:

>339_bases
TTGATTTGTAACCTATCCGGGAAAAAAAACTTTAGCAGGGTTTTTCGTCAAGGGAGAAAAATAAACTGTGAAGTCATGAC
GGTCTATGTTCTTTTTAGTGAAGAAAAAAAACTGTTTGTTGGTTTTGTGATCCCAAAAAAGATTGGTTGTGCTGTTGTGA
GAAATAGAATAAGGAGACGGATAAGGTCTCTAGCAGTTGAGCTATTTCGCCGTCAACCCGAGAGACTTATGGGTGCATCT
CTAATTTTCAGGGTTTTTCCAAAATCAAGACCGATAGGTTTCAGAGAGCTGTGTAAGGACTTTGAAAAAGTAAAAAAGAG
GATGGGGATAGATGCTTAG

Upstream 100 bases:

>100_bases
GGCTTCCGCTCGAGAATGTCAACAGCTTCCGGCAGAAGAATAATTTCCTGCCGTCGTCGCAAAAACCGCGAGACTTTGAC
CGCCTGAGTTTCTCGATCAA

Downstream 100 bases:

>100_bases
AATCGTTCCTCGGAATATTTTTATTCTATTCATCATTGCTTATCGGAAAATTATTTCTCCCATGTATGGCCCTGTATGCA
AGTATTACCCGTCCTGTTCC

Product: ribonuclease P protein component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MICNLSGKKNFSRVFRQGRKINCEVMTVYVLFSEEKKLFVGFVIPKKIGCAVVRNRIRRRIRSLAVELFRRQPERLMGAS
LIFRVFPKSRPIGFRELCKDFEKVKKRMGIDA

Sequences:

>Translated_112_residues
MICNLSGKKNFSRVFRQGRKINCEVMTVYVLFSEEKKLFVGFVIPKKIGCAVVRNRIRRRIRSLAVELFRRQPERLMGAS
LIFRVFPKSRPIGFRELCKDFEKVKKRMGIDA
>Mature_112_residues
MICNLSGKKNFSRVFRQGRKINCEVMTVYVLFSEEKKLFVGFVIPKKIGCAVVRNRIRRRIRSLAVELFRRQPERLMGAS
LIFRVFPKSRPIGFRELCKDFEKVKKRMGIDA

Specific function: Unknown

COG id: COG0594

COG function: function code J; RNase P protein component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.26.5

Molecular weight: Translated: 13184; Mature: 13184

Theoretical pI: Translated: 11.72; Mature: 11.72

Prosite motif: PS00648 RIBONUCLEASE_P

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICNLSGKKNFSRVFRQGRKINCEVMTVYVLFSEEKKLFVGFVIPKKIGCAVVRNRIRRR
CCCCCCCCHHHHHHHHCCCCCCCEEEEEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHH
IRSLAVELFRRQPERLMGASLIFRVFPKSRPIGFRELCKDFEKVKKRMGIDA
HHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MICNLSGKKNFSRVFRQGRKINCEVMTVYVLFSEEKKLFVGFVIPKKIGCAVVRNRIRRR
CCCCCCCCHHHHHHHHCCCCCCCEEEEEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHH
IRSLAVELFRRQPERLMGASLIFRVFPKSRPIGFRELCKDFEKVKKRMGIDA
HHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA