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The map label for this gene is ybfF [C]

Identifier: 28572918

GI number: 28572918

Start: 881548

End: 882351

Strand: Reverse

Name: ybfF [C]

Synonym: TW777

Alternate gene names: 28572918

Gene position: 882351-881548 (Counterclockwise)

Preceding gene: 28572920

Following gene: 28572917

Centisome position: 95.29

GC content: 48.63

Gene sequence:

>804_bases
TTGCACGATCTGTCACGGCATCCGGTCATTATCATCCCAACCTACAATGAAAGGGAGTCCCTACCCAGGATAGTTGCCGA
CATACGGTCTGTTCTGCCGGATATAAATATCGTAGTTGTCGATGATAATAGTCCAGACAGAACAGGCGTTTTGGCAGATC
GACTAGCGGAGTCTGATGACCGTATGTCTGTTGTGCATAGATCTAAAAAGGCTGGCCTTGGTGCAGCTTATCTACACGCC
TTTTCCAGGGTTATAGAGTCCGGAGCGAGAGTTATTGTCCAAATGGATGCTGATGGCAGTCACAGCCCCAGGGATCTGAA
AAGACTGTTATCGCACTCGCAAGATTACGATGTTGTCATAGGTTCGCGATGGATTACTGGTGGCGTTGTTGTTAACTGGT
CCATGCGACGCAAGTTACTGAGTAAAATGGGGTCGTTTTACAGCAGAATTCTGCTTCGTATACGGGTTAGGGATGTTACA
TCCGGCTTCAAGGTGTGGAAAGCGGAAGCCCTAAGAAAAATGGATTTTTCTTCACTAAATAGTAGGGGGTATTGTTTTCA
GATAGATTTGCTGCGCGAGGCAATAAGGTCTGGGGCTTCAGTAAAGGAGGTTCCGATCCGATTTGCTGATCGAGAGCGTG
GTGCCTCGAAAATGACAGGTTGGGTTATTCTTGAGGCTTTGTTACGCGTGACGGCGTGGGGGTTATTAGATGCGGTTAAG
TGTTTGTTCGGGTGGCTCCGGATTGACCCGCGTAACGATACGCGTCCAGCCTGCAAGAGGCGACCGACGAAGAGGGCAAA
ATAA

Upstream 100 bases:

>100_bases
CAGTCGTCTTGTCGCCGCGTGCCATTCTCGCACAACGCAAAGCCTGGGTGCCGCTGTGTATTCCCATGTTTGTTACGCGT
TGTACCTTGCGGGGGGCTAG

Downstream 100 bases:

>100_bases
GTAAAAATAGGAGAATCACGCAGTCAAAACAAGCCCTTAGCCCCATGTCTTCGCTCGCCATAGGTGGTGTGCATATGGCT
ACTGTGTGTCCTGCGTATTG

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MHDLSRHPVIIIPTYNERESLPRIVADIRSVLPDINIVVVDDNSPDRTGVLADRLAESDDRMSVVHRSKKAGLGAAYLHA
FSRVIESGARVIVQMDADGSHSPRDLKRLLSHSQDYDVVIGSRWITGGVVVNWSMRRKLLSKMGSFYSRILLRIRVRDVT
SGFKVWKAEALRKMDFSSLNSRGYCFQIDLLREAIRSGASVKEVPIRFADRERGASKMTGWVILEALLRVTAWGLLDAVK
CLFGWLRIDPRNDTRPACKRRPTKRAK

Sequences:

>Translated_267_residues
MHDLSRHPVIIIPTYNERESLPRIVADIRSVLPDINIVVVDDNSPDRTGVLADRLAESDDRMSVVHRSKKAGLGAAYLHA
FSRVIESGARVIVQMDADGSHSPRDLKRLLSHSQDYDVVIGSRWITGGVVVNWSMRRKLLSKMGSFYSRILLRIRVRDVT
SGFKVWKAEALRKMDFSSLNSRGYCFQIDLLREAIRSGASVKEVPIRFADRERGASKMTGWVILEALLRVTAWGLLDAVK
CLFGWLRIDPRNDTRPACKRRPTKRAK
>Mature_267_residues
MHDLSRHPVIIIPTYNERESLPRIVADIRSVLPDINIVVVDDNSPDRTGVLADRLAESDDRMSVVHRSKKAGLGAAYLHA
FSRVIESGARVIVQMDADGSHSPRDLKRLLSHSQDYDVVIGSRWITGGVVVNWSMRRKLLSKMGSFYSRILLRIRVRDVT
SGFKVWKAEALRKMDFSSLNSRGYCFQIDLLREAIRSGASVKEVPIRFADRERGASKMTGWVILEALLRVTAWGLLDAVK
CLFGWLRIDPRNDTRPACKRRPTKRAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503363, Length=226, Percent_Identity=36.283185840708, Blast_Score=139, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI71999402, Length=215, Percent_Identity=38.6046511627907, Blast_Score=145, Evalue=3e-35,
Organism=Saccharomyces cerevisiae, GI6325441, Length=230, Percent_Identity=27.3913043478261, Blast_Score=90, Evalue=4e-19,
Organism=Saccharomyces cerevisiae, GI6325029, Length=235, Percent_Identity=27.2340425531915, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24585265, Length=224, Percent_Identity=36.1607142857143, Blast_Score=143, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 30265; Mature: 30265

Theoretical pI: Translated: 10.91; Mature: 10.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDLSRHPVIIIPTYNERESLPRIVADIRSVLPDINIVVVDDNSPDRTGVLADRLAESDD
CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCH
RMSVVHRSKKAGLGAAYLHAFSRVIESGARVIVQMDADGSHSPRDLKRLLSHSQDYDVVI
HHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCCCCCEEEE
GSRWITGGVVVNWSMRRKLLSKMGSFYSRILLRIRVRDVTSGFKVWKAEALRKMDFSSLN
ECEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SRGYCFQIDLLREAIRSGASVKEVPIRFADRERGASKMTGWVILEALLRVTAWGLLDAVK
CCCCEEEHHHHHHHHHCCCCEECCCEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
CLFGWLRIDPRNDTRPACKRRPTKRAK
HHHHHHEECCCCCCCCHHHCCCCCCCC
>Mature Secondary Structure
MHDLSRHPVIIIPTYNERESLPRIVADIRSVLPDINIVVVDDNSPDRTGVLADRLAESDD
CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCH
RMSVVHRSKKAGLGAAYLHAFSRVIESGARVIVQMDADGSHSPRDLKRLLSHSQDYDVVI
HHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCCCCCEEEE
GSRWITGGVVVNWSMRRKLLSKMGSFYSRILLRIRVRDVTSGFKVWKAEALRKMDFSSLN
ECEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SRGYCFQIDLLREAIRSGASVKEVPIRFADRERGASKMTGWVILEALLRVTAWGLLDAVK
CCCCEEEHHHHHHHHHCCCCEECCCEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
CLFGWLRIDPRNDTRPACKRRPTKRAK
HHHHHHEECCCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]