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The map label for this gene is yidA [C]

Identifier: 28572882

GI number: 28572882

Start: 837031

End: 837822

Strand: Direct

Name: yidA [C]

Synonym: TW741

Alternate gene names: 28572882

Gene position: 837031-837822 (Clockwise)

Preceding gene: 28572881

Following gene: 28572883

Centisome position: 90.4

GC content: 47.1

Gene sequence:

>792_bases
ATGAATAAGCTTCTTATAGCTCTTGATATTGATGGAACTGTTCTGAACCACGACGGACACACTCCGAGTGAGGGTATCGT
GGCTCAGTTGGCTCGGCTCGTAAGAGAACATTATCTCGTTTTTGCGAGTGGGCGATCTACCGGAGACACACTGCCTGTCT
TGGAAAGCCTTGGCCTTACCCAGGGTGCAATGCCGCAATTTATCATCTGTTGCAATGGTGCCGTTACCCTCAAGATGGAG
AATAACGAGTATGTGAGACACAGGGTTATAAGTTTCGATGCCTCGCGCACTTTAGAGTACATAATAAACACCCTTCCCGG
AGTTGAACTAGCAGTTGAGAGATGTGATGGCGTATACATGCACACATCAAATTTTCCGCTCGACTATCTGCATGACAAGA
GAATTCTTTCCAGCGTTAGCGAAATTGTGCATACACCCCCAGCAAGGGTTGTCGTGTACGAAGCCAGTATAGACGCCTCA
GAAATTGCCAAACGCTTTGAAAGCAGGTGTATAAATTTCAACAATGCATGGGGATATTGGGACATAATGCCACCCGGGGT
TAACAAATCAACCGGGCTATCTTTTGTTCAGCAAAGCCTGTGTGTTAGCGGTGACATGGTCGTGTCAGCGGGTGATGGCT
TTAACGATATTGAAATGCTTGAATGGACAAAAAGTATTGGTGGGCGGAGTTTTGCAATGGGTCAGGCCCCTGCAAGGGTT
AAACAGGCAGCACTTAAAGTAATTGGAACTGTGTACGATGGTGGGCTGGCTAAGGAGCTAGCCAAGCTTTAG

Upstream 100 bases:

>100_bases
CATCAGACTTCCAATGGGAGTATCAGGGTGCCAGAAGCCCTTAGACCTCTCCTGGGTCAGGATGTAATAGAGAGATAGTA
TCGGAAATTCTTGGAATAGT

Downstream 100 bases:

>100_bases
AAGGTTTACAAAACCGTAGAGGTGTGCATGCTACTCTTGCCTTGTATGGAGGGCTGTCCGAGCGGCCTAAGGAGCCGGTC
TTGAAAACCGGTGAGCAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: HAD-Superfamily Hydrolase Subfamily IIB; HAD Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; HAD-Superfamily Hydrolase; HAD-Superfamily Hydrolase / Phosphatase; HAD Hydrolase; HAD Family Hydrolase; Hydrolase; Cof-Like Protein Hydrolase

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MNKLLIALDIDGTVLNHDGHTPSEGIVAQLARLVREHYLVFASGRSTGDTLPVLESLGLTQGAMPQFIICCNGAVTLKME
NNEYVRHRVISFDASRTLEYIINTLPGVELAVERCDGVYMHTSNFPLDYLHDKRILSSVSEIVHTPPARVVVYEASIDAS
EIAKRFESRCINFNNAWGYWDIMPPGVNKSTGLSFVQQSLCVSGDMVVSAGDGFNDIEMLEWTKSIGGRSFAMGQAPARV
KQAALKVIGTVYDGGLAKELAKL

Sequences:

>Translated_263_residues
MNKLLIALDIDGTVLNHDGHTPSEGIVAQLARLVREHYLVFASGRSTGDTLPVLESLGLTQGAMPQFIICCNGAVTLKME
NNEYVRHRVISFDASRTLEYIINTLPGVELAVERCDGVYMHTSNFPLDYLHDKRILSSVSEIVHTPPARVVVYEASIDAS
EIAKRFESRCINFNNAWGYWDIMPPGVNKSTGLSFVQQSLCVSGDMVVSAGDGFNDIEMLEWTKSIGGRSFAMGQAPARV
KQAALKVIGTVYDGGLAKELAKL
>Mature_263_residues
MNKLLIALDIDGTVLNHDGHTPSEGIVAQLARLVREHYLVFASGRSTGDTLPVLESLGLTQGAMPQFIICCNGAVTLKME
NNEYVRHRVISFDASRTLEYIINTLPGVELAVERCDGVYMHTSNFPLDYLHDKRILSSVSEIVHTPPARVVVYEASIDAS
EIAKRFESRCINFNNAWGYWDIMPPGVNKSTGLSFVQQSLCVSGDMVVSAGDGFNDIEMLEWTKSIGGRSFAMGQAPARV
KQAALKVIGTVYDGGLAKELAKL

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28765; Mature: 28765

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: PS01228 COF_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLLIALDIDGTVLNHDGHTPSEGIVAQLARLVREHYLVFASGRSTGDTLPVLESLGLT
CCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHCCCC
QGAMPQFIICCNGAVTLKMENNEYVRHRVISFDASRTLEYIINTLPGVELAVERCDGVYM
CCCCCCEEEEECCEEEEEECCCCEEEHHEEECCHHHHHHHHHHHCCCHHHHHHHCCCEEE
HTSNFPLDYLHDKRILSSVSEIVHTPPARVVVYEASIDASEIAKRFESRCINFNNAWGYW
ECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEE
DIMPPGVNKSTGLSFVQQSLCVSGDMVVSAGDGFNDIEMLEWTKSIGGRSFAMGQAPARV
EECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCEEECCCCHHHH
KQAALKVIGTVYDGGLAKELAKL
HHHHHHHHHHHHCCHHHHHHHCC
>Mature Secondary Structure
MNKLLIALDIDGTVLNHDGHTPSEGIVAQLARLVREHYLVFASGRSTGDTLPVLESLGLT
CCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHCCCC
QGAMPQFIICCNGAVTLKMENNEYVRHRVISFDASRTLEYIINTLPGVELAVERCDGVYM
CCCCCCEEEEECCEEEEEECCCCEEEHHEEECCHHHHHHHHHHHCCCHHHHHHHCCCEEE
HTSNFPLDYLHDKRILSSVSEIVHTPPARVVVYEASIDASEIAKRFESRCINFNNAWGYW
ECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEE
DIMPPGVNKSTGLSFVQQSLCVSGDMVVSAGDGFNDIEMLEWTKSIGGRSFAMGQAPARV
EECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCEEECCCCHHHH
KQAALKVIGTVYDGGLAKELAKL
HHHHHHHHHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA