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The map label for this gene is hofB [C]

Identifier: 28572861

GI number: 28572861

Start: 812993

End: 813937

Strand: Reverse

Name: hofB [C]

Synonym: TW720

Alternate gene names: 28572861

Gene position: 813937-812993 (Counterclockwise)

Preceding gene: 28572862

Following gene: 28572860

Centisome position: 87.9

GC content: 45.82

Gene sequence:

>945_bases
ATGAGCGATAGTAGTTGGGGGCAATTATCACCACTGATAAGTGACCCAACTGTAACCGACATATTTGTAAATGGCGATCG
CGGAGTTTGGGTTGATCGAGGGTGTGGGCCCGTTAGGGAAGATAAGTTTTCCTTTACCTCACAACAGATACATGAATTGA
TCATCCGCTTGATATCTCTCGGCAATCGTCATATTGATGAAGCAACACCATGTGTTGATGTTCGCCTTCATGGTGGTGTA
CGTGTTCATGCTGTTTTACCTCCGGTGTCAACTATCGGCCCACTTCTTTCTGTGAGACTGCCGAGTCTAAAACCAATAAC
TTTGGAAGATTTAAAAAACAGCGGATTTTTCAATGGTAAGTCTATGGATTATAGCGATTGGCTTACTCGCCAGGTTCTTG
AGCGTAAAAATATTCTTATTACAGGTGCAGCCGGGACAGGTAAAACAACACTTTTATCGGCGCTTTTGCGTGAGGTTCCG
GAAAACGAGCGAATTATTGTGATTGAGGATGTTGCAGAGATAAACATTGTGCATCCGCATGTAATTTCGTTGGAAGCGCG
ACAGGCAAACTCCGAAGGTGCCGGCGAGATAAGCCTTATCACCCTTCTGAAAAATGCTCTTAGAATGCGCCCTGATCGTC
TCGTTCTTGGCGAGTGTCGTGGTGGGGAGATACGCGAGCTTTTCTCGGCCCTCAACACTGGACATAATGGCGGTTCTGGT
ACGCTACATGCAAATTCCTTACTCGATGTACCGGCTCGCCTGGAAGCAATGTGTGCTTTGGCAGATATGACTGCTTCATC
AACTGCTCGCCAGGCATTCAGTGCGATAGACATTATTGTTCATCTTGAACAATCACATGGGGCAAGAAGAATAAGCGCAA
TCGGTTGTTTGGCAATTGAGGATAATCGCCTGAAGGTAAATGAGTTGTCATGCACAGAACTTTAG

Upstream 100 bases:

>100_bases
ATTCTTTCTCCCAACGCCGAGCTCCCGGGCACAGAGGCTTCTGGACAGCATGTGCAATCTGGAACCATCGTTTCCGGTAT
CTCAGACTGCCCGTCGAGGG

Downstream 100 bases:

>100_bases
AAAACAGAAAACTGCCCCTGGAAGAGATTGCATCCATAACCTGCACTCTTGCAGTGCTGCTTGATGGGGGTATTACGCCC
GCGAGTGCATGGAAACATGC

Product: TadA-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MSDSSWGQLSPLISDPTVTDIFVNGDRGVWVDRGCGPVREDKFSFTSQQIHELIIRLISLGNRHIDEATPCVDVRLHGGV
RVHAVLPPVSTIGPLLSVRLPSLKPITLEDLKNSGFFNGKSMDYSDWLTRQVLERKNILITGAAGTGKTTLLSALLREVP
ENERIIVIEDVAEINIVHPHVISLEARQANSEGAGEISLITLLKNALRMRPDRLVLGECRGGEIRELFSALNTGHNGGSG
TLHANSLLDVPARLEAMCALADMTASSTARQAFSAIDIIVHLEQSHGARRISAIGCLAIEDNRLKVNELSCTEL

Sequences:

>Translated_314_residues
MSDSSWGQLSPLISDPTVTDIFVNGDRGVWVDRGCGPVREDKFSFTSQQIHELIIRLISLGNRHIDEATPCVDVRLHGGV
RVHAVLPPVSTIGPLLSVRLPSLKPITLEDLKNSGFFNGKSMDYSDWLTRQVLERKNILITGAAGTGKTTLLSALLREVP
ENERIIVIEDVAEINIVHPHVISLEARQANSEGAGEISLITLLKNALRMRPDRLVLGECRGGEIRELFSALNTGHNGGSG
TLHANSLLDVPARLEAMCALADMTASSTARQAFSAIDIIVHLEQSHGARRISAIGCLAIEDNRLKVNELSCTEL
>Mature_313_residues
SDSSWGQLSPLISDPTVTDIFVNGDRGVWVDRGCGPVREDKFSFTSQQIHELIIRLISLGNRHIDEATPCVDVRLHGGVR
VHAVLPPVSTIGPLLSVRLPSLKPITLEDLKNSGFFNGKSMDYSDWLTRQVLERKNILITGAAGTGKTTLLSALLREVPE
NERIIVIEDVAEINIVHPHVISLEARQANSEGAGEISLITLLKNALRMRPDRLVLGECRGGEIRELFSALNTGHNGGSGT
LHANSLLDVPARLEAMCALADMTASSTARQAFSAIDIIVHLEQSHGARRISAIGCLAIEDNRLKVNELSCTEL

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022399
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 34127; Mature: 33995

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSSWGQLSPLISDPTVTDIFVNGDRGVWVDRGCGPVREDKFSFTSQQIHELIIRLISL
CCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHC
GNRHIDEATPCVDVRLHGGVRVHAVLPPVSTIGPLLSVRLPSLKPITLEDLKNSGFFNGK
CCCCCCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHCCCCCCCEEHHHHCCCCCCCCC
SMDYSDWLTRQVLERKNILITGAAGTGKTTLLSALLREVPENERIIVIEDVAEINIVHPH
CCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCE
VISLEARQANSEGAGEISLITLLKNALRMRPDRLVLGECRGGEIRELFSALNTGHNGGSG
EEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCC
TLHANSLLDVPARLEAMCALADMTASSTARQAFSAIDIIVHLEQSHGARRISAIGCLAIE
EEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEEEEEEEEE
DNRLKVNELSCTEL
CCCEEEECCCCCCC
>Mature Secondary Structure 
SDSSWGQLSPLISDPTVTDIFVNGDRGVWVDRGCGPVREDKFSFTSQQIHELIIRLISL
CCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHC
GNRHIDEATPCVDVRLHGGVRVHAVLPPVSTIGPLLSVRLPSLKPITLEDLKNSGFFNGK
CCCCCCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHCCCCCCCEEHHHHCCCCCCCCC
SMDYSDWLTRQVLERKNILITGAAGTGKTTLLSALLREVPENERIIVIEDVAEINIVHPH
CCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCE
VISLEARQANSEGAGEISLITLLKNALRMRPDRLVLGECRGGEIRELFSALNTGHNGGSG
EEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCC
TLHANSLLDVPARLEAMCALADMTASSTARQAFSAIDIIVHLEQSHGARRISAIGCLAIE
EEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEEEEEEEEE
DNRLKVNELSCTEL
CCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12218036; 9634230 [H]