| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is 28572859
Identifier: 28572859
GI number: 28572859
Start: 811842
End: 812048
Strand: Reverse
Name: 28572859
Synonym: TW718
Alternate gene names: NA
Gene position: 812048-811842 (Counterclockwise)
Preceding gene: 28572860
Following gene: 28572858
Centisome position: 87.7
GC content: 43.96
Gene sequence:
>207_bases ATGTTTAAAAAACTTATTAAAAACAAAAATTTGGGAGATATAAGAAAATTTATCTCATCCGATTCGGGTGCCATTACGGC TGAATACGCCATTATAGTCGTGGGCGCAGTCGGTTTTGCAGGGCTACTAGTTGTCGTCTTGCGAAGCGGGGAAGTGCATA AGCAGCTGAGAGATATAATTCGTGGAGCGCTGTCCTGGAGAGGCTAG
Upstream 100 bases:
>100_bases CATTCTACCCGCTTTTATGCTAATCGGAATTGTCCCACTGGTTATCTCAATGATTTCGGGCGGGATACTGTGAGAAACAA AGAAAAAGAAATGGAGGAAT
Downstream 100 bases:
>100_bases TGTGTTGAAAATATCTCGTGAAGTGACCGTTCGCAGCCGGATATTCTCTGAGCGTGGCAGTATTACTGCAGAAGTAGCGA TATCGTTTCCGATAGTGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 68; Mature: 68
Protein sequence:
>68_residues MFKKLIKNKNLGDIRKFISSDSGAITAEYAIIVVGAVGFAGLLVVVLRSGEVHKQLRDIIRGALSWRG
Sequences:
>Translated_68_residues MFKKLIKNKNLGDIRKFISSDSGAITAEYAIIVVGAVGFAGLLVVVLRSGEVHKQLRDIIRGALSWRG >Mature_68_residues MFKKLIKNKNLGDIRKFISSDSGAITAEYAIIVVGAVGFAGLLVVVLRSGEVHKQLRDIIRGALSWRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7398; Mature: 7398
Theoretical pI: Translated: 11.08; Mature: 11.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKKLIKNKNLGDIRKFISSDSGAITAEYAIIVVGAVGFAGLLVVVLRSGEVHKQLRDII CCHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH RGALSWRG HHHHCCCC >Mature Secondary Structure MFKKLIKNKNLGDIRKFISSDSGAITAEYAIIVVGAVGFAGLLVVVLRSGEVHKQLRDII CCHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH RGALSWRG HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA