Definition Tropheryma whipplei TW08/27, complete genome.
Accession NC_004551
Length 925,938

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The map label for this gene is parA2 [C]

Identifier: 28572793

GI number: 28572793

Start: 742132

End: 742905

Strand: Direct

Name: parA2 [C]

Synonym: TW648

Alternate gene names: 28572793

Gene position: 742132-742905 (Clockwise)

Preceding gene: 28572787

Following gene: 28572803

Centisome position: 80.15

GC content: 49.48

Gene sequence:

>774_bases
GTGTATGTTGTAAGCATTAGCTCGCTGAAGGGTGGGGTAGGCAAGACGACTGTTTGTCTCGGTCTTGCCTCCTCTGCTTT
GCATCGTGGTATAAAAACTCTCGTTGTTGACTGCGATCCTCAGGCAGATGCTTCGACGGGTCTTGGGGTTAGCCTGGGGA
GCTGTTCTATAACGGACGTACTCGAAAAGCCGCGCAAAGTGACAGATGCAATTTGCGCGACATCCTGGGCCGGAGCAAAG
ACGCTTGATGTGTTGGTTGGCTCTCCGTTGTCTGTAAACTACGACACGCCACAGTTAACTGTTGATCAAATCTGGGTGCT
TGAAGAAGCTTTGAGTATTGTCGAGACGGAATATGATCTTGTCCTGATTGATTGCAATCCATCACTCGGAGCCCTGACAC
GCATTGCATGGGCCGCAAGTGACAAAATTGCCATAGTAACAGAACCTGGGTTGTTTGCAATTTCAGCGGTTGACAGAGCA
CTGCGGGCAATCAACGATCTTCGGTACGGCATTTCGCCCAGGTTGCAACCTCTTGGCATTATTGTCAACCGTGTTTACCC
AAAGGTGTCTGAGCATCAATTCCGCCTCCGAGAGCTCAAAGATATGTTCGGTGTTTTGGCTTTGAGTCCGTATTTACCAG
AGAGAAGTACCGTTCAGCAGGCACAGGGTGCCTGTCTCCCGATACATTCATGGCCTAATGAGCATGCAGAGGATTTTGCT
AAGAGGTTCGATCAATTACTTGATAAGACCCTAAAGGGTGCACCTGTCGGTTAG

Upstream 100 bases:

>100_bases
TTTCACCGCGGTTTGCTATGAGAATCTTTTTAAACACTTCTAGATGATATCCTCAAAGCATTCTGGAGTTTTACCAAATC
TGTGTTGTTGGATTGTATAA

Downstream 100 bases:

>100_bases
TTATGCAGTACATAACTAAGGCTTATGTAGTTACCTGTGGATATATCTCATAGGCTTGGGTAACTATATCTGTTAGTTCC
TTTGGTATTGGTCCATGTCT

Product: chromosome partitioning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MYVVSISSLKGGVGKTTVCLGLASSALHRGIKTLVVDCDPQADASTGLGVSLGSCSITDVLEKPRKVTDAICATSWAGAK
TLDVLVGSPLSVNYDTPQLTVDQIWVLEEALSIVETEYDLVLIDCNPSLGALTRIAWAASDKIAIVTEPGLFAISAVDRA
LRAINDLRYGISPRLQPLGIIVNRVYPKVSEHQFRLRELKDMFGVLALSPYLPERSTVQQAQGACLPIHSWPNEHAEDFA
KRFDQLLDKTLKGAPVG

Sequences:

>Translated_257_residues
MYVVSISSLKGGVGKTTVCLGLASSALHRGIKTLVVDCDPQADASTGLGVSLGSCSITDVLEKPRKVTDAICATSWAGAK
TLDVLVGSPLSVNYDTPQLTVDQIWVLEEALSIVETEYDLVLIDCNPSLGALTRIAWAASDKIAIVTEPGLFAISAVDRA
LRAINDLRYGISPRLQPLGIIVNRVYPKVSEHQFRLRELKDMFGVLALSPYLPERSTVQQAQGACLPIHSWPNEHAEDFA
KRFDQLLDKTLKGAPVG
>Mature_257_residues
MYVVSISSLKGGVGKTTVCLGLASSALHRGIKTLVVDCDPQADASTGLGVSLGSCSITDVLEKPRKVTDAICATSWAGAK
TLDVLVGSPLSVNYDTPQLTVDQIWVLEEALSIVETEYDLVLIDCNPSLGALTRIAWAASDKIAIVTEPGLFAISAVDRA
LRAINDLRYGISPRLQPLGIIVNRVYPKVSEHQFRLRELKDMFGVLALSPYLPERSTVQQAQGACLPIHSWPNEHAEDFA
KRFDQLLDKTLKGAPVG

Specific function: This Protein Is Essential For Plasmid Partition. It Ensures The Proper Distribution Of Newly Replicated Plasmids To Daughter Cells During Cell Division. Sopa Is Trans-Acting. [C]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 27669; Mature: 27669

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVVSISSLKGGVGKTTVCLGLASSALHRGIKTLVVDCDPQADASTGLGVSLGSCSITDV
CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEECCCCHHHH
LEKPRKVTDAICATSWAGAKTLDVLVGSPLSVNYDTPQLTVDQIWVLEEALSIVETEYDL
HHCHHHHHHHHHHCCCCCCHHHHHEECCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCE
VLIDCNPSLGALTRIAWAASDKIAIVTEPGLFAISAVDRALRAINDLRYGISPRLQPLGI
EEEECCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
IVNRVYPKVSEHQFRLRELKDMFGVLALSPYLPERSTVQQAQGACLPIHSWPNEHAEDFA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEECCCCCCHHHHHHH
KRFDQLLDKTLKGAPVG
HHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MYVVSISSLKGGVGKTTVCLGLASSALHRGIKTLVVDCDPQADASTGLGVSLGSCSITDV
CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEECCCCHHHH
LEKPRKVTDAICATSWAGAKTLDVLVGSPLSVNYDTPQLTVDQIWVLEEALSIVETEYDL
HHCHHHHHHHHHHCCCCCCHHHHHEECCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCE
VLIDCNPSLGALTRIAWAASDKIAIVTEPGLFAISAVDRALRAINDLRYGISPRLQPLGI
EEEECCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
IVNRVYPKVSEHQFRLRELKDMFGVLALSPYLPERSTVQQAQGACLPIHSWPNEHAEDFA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEECCCCCCHHHHHHH
KRFDQLLDKTLKGAPVG
HHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]