| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is parA2 [C]
Identifier: 28572793
GI number: 28572793
Start: 742132
End: 742905
Strand: Direct
Name: parA2 [C]
Synonym: TW648
Alternate gene names: 28572793
Gene position: 742132-742905 (Clockwise)
Preceding gene: 28572787
Following gene: 28572803
Centisome position: 80.15
GC content: 49.48
Gene sequence:
>774_bases GTGTATGTTGTAAGCATTAGCTCGCTGAAGGGTGGGGTAGGCAAGACGACTGTTTGTCTCGGTCTTGCCTCCTCTGCTTT GCATCGTGGTATAAAAACTCTCGTTGTTGACTGCGATCCTCAGGCAGATGCTTCGACGGGTCTTGGGGTTAGCCTGGGGA GCTGTTCTATAACGGACGTACTCGAAAAGCCGCGCAAAGTGACAGATGCAATTTGCGCGACATCCTGGGCCGGAGCAAAG ACGCTTGATGTGTTGGTTGGCTCTCCGTTGTCTGTAAACTACGACACGCCACAGTTAACTGTTGATCAAATCTGGGTGCT TGAAGAAGCTTTGAGTATTGTCGAGACGGAATATGATCTTGTCCTGATTGATTGCAATCCATCACTCGGAGCCCTGACAC GCATTGCATGGGCCGCAAGTGACAAAATTGCCATAGTAACAGAACCTGGGTTGTTTGCAATTTCAGCGGTTGACAGAGCA CTGCGGGCAATCAACGATCTTCGGTACGGCATTTCGCCCAGGTTGCAACCTCTTGGCATTATTGTCAACCGTGTTTACCC AAAGGTGTCTGAGCATCAATTCCGCCTCCGAGAGCTCAAAGATATGTTCGGTGTTTTGGCTTTGAGTCCGTATTTACCAG AGAGAAGTACCGTTCAGCAGGCACAGGGTGCCTGTCTCCCGATACATTCATGGCCTAATGAGCATGCAGAGGATTTTGCT AAGAGGTTCGATCAATTACTTGATAAGACCCTAAAGGGTGCACCTGTCGGTTAG
Upstream 100 bases:
>100_bases TTTCACCGCGGTTTGCTATGAGAATCTTTTTAAACACTTCTAGATGATATCCTCAAAGCATTCTGGAGTTTTACCAAATC TGTGTTGTTGGATTGTATAA
Downstream 100 bases:
>100_bases TTATGCAGTACATAACTAAGGCTTATGTAGTTACCTGTGGATATATCTCATAGGCTTGGGTAACTATATCTGTTAGTTCC TTTGGTATTGGTCCATGTCT
Product: chromosome partitioning protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MYVVSISSLKGGVGKTTVCLGLASSALHRGIKTLVVDCDPQADASTGLGVSLGSCSITDVLEKPRKVTDAICATSWAGAK TLDVLVGSPLSVNYDTPQLTVDQIWVLEEALSIVETEYDLVLIDCNPSLGALTRIAWAASDKIAIVTEPGLFAISAVDRA LRAINDLRYGISPRLQPLGIIVNRVYPKVSEHQFRLRELKDMFGVLALSPYLPERSTVQQAQGACLPIHSWPNEHAEDFA KRFDQLLDKTLKGAPVG
Sequences:
>Translated_257_residues MYVVSISSLKGGVGKTTVCLGLASSALHRGIKTLVVDCDPQADASTGLGVSLGSCSITDVLEKPRKVTDAICATSWAGAK TLDVLVGSPLSVNYDTPQLTVDQIWVLEEALSIVETEYDLVLIDCNPSLGALTRIAWAASDKIAIVTEPGLFAISAVDRA LRAINDLRYGISPRLQPLGIIVNRVYPKVSEHQFRLRELKDMFGVLALSPYLPERSTVQQAQGACLPIHSWPNEHAEDFA KRFDQLLDKTLKGAPVG >Mature_257_residues MYVVSISSLKGGVGKTTVCLGLASSALHRGIKTLVVDCDPQADASTGLGVSLGSCSITDVLEKPRKVTDAICATSWAGAK TLDVLVGSPLSVNYDTPQLTVDQIWVLEEALSIVETEYDLVLIDCNPSLGALTRIAWAASDKIAIVTEPGLFAISAVDRA LRAINDLRYGISPRLQPLGIIVNRVYPKVSEHQFRLRELKDMFGVLALSPYLPERSTVQQAQGACLPIHSWPNEHAEDFA KRFDQLLDKTLKGAPVG
Specific function: This Protein Is Essential For Plasmid Partition. It Ensures The Proper Distribution Of Newly Replicated Plasmids To Daughter Cells During Cell Division. Sopa Is Trans-Acting. [C]
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 27669; Mature: 27669
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVVSISSLKGGVGKTTVCLGLASSALHRGIKTLVVDCDPQADASTGLGVSLGSCSITDV CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEECCCCHHHH LEKPRKVTDAICATSWAGAKTLDVLVGSPLSVNYDTPQLTVDQIWVLEEALSIVETEYDL HHCHHHHHHHHHHCCCCCCHHHHHEECCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCE VLIDCNPSLGALTRIAWAASDKIAIVTEPGLFAISAVDRALRAINDLRYGISPRLQPLGI EEEECCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHH IVNRVYPKVSEHQFRLRELKDMFGVLALSPYLPERSTVQQAQGACLPIHSWPNEHAEDFA HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEECCCCCCHHHHHHH KRFDQLLDKTLKGAPVG HHHHHHHHHHHCCCCCC >Mature Secondary Structure MYVVSISSLKGGVGKTTVCLGLASSALHRGIKTLVVDCDPQADASTGLGVSLGSCSITDV CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEECCCCHHHH LEKPRKVTDAICATSWAGAKTLDVLVGSPLSVNYDTPQLTVDQIWVLEEALSIVETEYDL HHCHHHHHHHHHHCCCCCCHHHHHEECCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCE VLIDCNPSLGALTRIAWAASDKIAIVTEPGLFAISAVDRALRAINDLRYGISPRLQPLGI EEEECCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHH IVNRVYPKVSEHQFRLRELKDMFGVLALSPYLPERSTVQQAQGACLPIHSWPNEHAEDFA HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEECCCCCCHHHHHHH KRFDQLLDKTLKGAPVG HHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]