Definition Tropheryma whipplei TW08/27, complete genome.
Accession NC_004551
Length 925,938

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The map label for this gene is 28572748

Identifier: 28572748

GI number: 28572748

Start: 676009

End: 676287

Strand: Direct

Name: 28572748

Synonym: TW600

Alternate gene names: NA

Gene position: 676009-676287 (Clockwise)

Preceding gene: 28572747

Following gene: 28572766

Centisome position: 73.01

GC content: 45.52

Gene sequence:

>279_bases
GTGGCATTTGTCTTGACGCACTGCCAGGCGGTCGTAAACCCTGATGTTATCCCAGACCACAGCCCAGTAAACCACGTCCC
AATTTTTTTCCAGAAACCAGAAGATTCGCTAGAACTACTAGAACTACTAGAACTACTAGAACTACTAGAACTACTAGAAC
TACTAGAACTACTAGAACAGGAGTCTTCAGATTTGCCCTTTGCAGCGGCGCTAGCAAAAGATCCCACTGCACTGACATCG
AATGAATGGGTACCAAATGAATGGACAGCAGGCGAATAA

Upstream 100 bases:

>100_bases
AGCGAAGCACTGAAAGAAATAAAAGAACTACAAAAGAATATCTATAAGCACCGCAGTCGGAACCGTTATTACAGTTATTG
CAAAGAGGTAAGGGTGTGAG

Downstream 100 bases:

>100_bases
GCTTGGGTTTGAGGTGAAGACGCAAGAAAGAAGGTTGGTGAAAGAACAAAGAGCGTGATCAGCTTACCCCTCATCTCACA
CCCCACATGTCAAAACAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 91

Protein sequence:

>92_residues
MAFVLTHCQAVVNPDVIPDHSPVNHVPIFFQKPEDSLELLELLELLELLELLELLELLEQESSDLPFAAALAKDPTALTS
NEWVPNEWTAGE

Sequences:

>Translated_92_residues
MAFVLTHCQAVVNPDVIPDHSPVNHVPIFFQKPEDSLELLELLELLELLELLELLELLEQESSDLPFAAALAKDPTALTS
NEWVPNEWTAGE
>Mature_91_residues
AFVLTHCQAVVNPDVIPDHSPVNHVPIFFQKPEDSLELLELLELLELLELLELLELLEQESSDLPFAAALAKDPTALTSN
EWVPNEWTAGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10289; Mature: 10158

Theoretical pI: Translated: 3.68; Mature: 3.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFVLTHCQAVVNPDVIPDHSPVNHVPIFFQKPEDSLELLELLELLELLELLELLELLEQ
CCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHC
ESSDLPFAAALAKDPTALTSNEWVPNEWTAGE
CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AFVLTHCQAVVNPDVIPDHSPVNHVPIFFQKPEDSLELLELLELLELLELLELLELLEQ
CHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHC
ESSDLPFAAALAKDPTALTSNEWVPNEWTAGE
CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA