| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is ftsX [H]
Identifier: 28572720
GI number: 28572720
Start: 623728
End: 624639
Strand: Reverse
Name: ftsX [H]
Synonym: TW572
Alternate gene names: 28572720
Gene position: 624639-623728 (Counterclockwise)
Preceding gene: 28572721
Following gene: 28572719
Centisome position: 67.46
GC content: 43.2
Gene sequence:
>912_bases ATGTTTACCTTTATCCTCAGCGAGCTGATCCATAATGTACGCCGCAGCGCATCTATGGTCTCCTCTGTGATTATCGTCAC ATTTATATCTCTCACATTTGTCGGAACAGCCGCTCTCATGCAGTTACAAATCGTGCACATGAAAAGCTTCTGGTACGATC GCGCCCAGGTTGCCATTTTTCTCTGCACCGAGCATTCATCTCAATCAACCTGCAGTGCCGGTAAGGCTACCGAAGAGCAG AAAGACAGCGTGCGTCAACGTCTTGATTCCTCGGTTATAAAGCCACTAATTGAAAAGTATTATTTTGAAAATCATGAGCA AGCCTACAAAAACTTCAAAGAACAATTCAAGAACAACAAAATCGTCGAGCTGACAACACCCGACCAGCTTAACGAAACTT TTTGGGTCAAGCTGCACAACCCTTCCCAGTCGACCGTTATTATCGAAGCCTTCAACGATATAAGTGGGGTTGATTCGGTT GTCGATCAGAGGCAGTATCTAAATCAGATTTTTTATATTCTAAATCTTGCCAGCGTAACATCCATCTCAATTGCGGCTGT AATGCTGATTGCGGCTGTAATGCTGATTGCAACTACAATACGTCTTTCTGCTTTTACAAGACGCAAGGAAATCGAGATTA TGCGCCTTGTTGGTGCCAGTAATTTCTTTGTCCAGGCACCATTCGTCCTTGAGGGGATTTTTGCCGCATCAATCGGTGCT CTATTGTCGAGCATTGCAATCGTGTCTATCGCACAATTCTTTATTACGGACTATCTTGCTATCAAGTTACCCGTTGTCTC ATTTTTCTCTGTTGGTGATTCTTTGATAATCGTTCCGATTATTTTTGGGATTGCCATTCTCCTTTCGGGATTATCTGCAA AATTCTCGATTTCTCGTTCACTTCGGGTCTAA
Upstream 100 bases:
>100_bases ACATAGATCAAAACCGTGACAGACAACACAGTGACGGGCAGTACAGATCAGTGCACGATCCAAAAAACACCGGACCCGAC AGGTAAAGTACAGGCAGCAA
Downstream 100 bases:
>100_bases GGGTTCAAGCTGTGCACAGGCGATCTTCTAAGAGTTACTCTTCCAGGAATTCTAAAACTCCAGAGCGTTCTAAAATTCCA GATTGCGTTATCGCATCAAA
Product: cell division protein FtsX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MFTFILSELIHNVRRSASMVSSVIIVTFISLTFVGTAALMQLQIVHMKSFWYDRAQVAIFLCTEHSSQSTCSAGKATEEQ KDSVRQRLDSSVIKPLIEKYYFENHEQAYKNFKEQFKNNKIVELTTPDQLNETFWVKLHNPSQSTVIIEAFNDISGVDSV VDQRQYLNQIFYILNLASVTSISIAAVMLIAAVMLIATTIRLSAFTRRKEIEIMRLVGASNFFVQAPFVLEGIFAASIGA LLSSIAIVSIAQFFITDYLAIKLPVVSFFSVGDSLIIVPIIFGIAILLSGLSAKFSISRSLRV
Sequences:
>Translated_303_residues MFTFILSELIHNVRRSASMVSSVIIVTFISLTFVGTAALMQLQIVHMKSFWYDRAQVAIFLCTEHSSQSTCSAGKATEEQ KDSVRQRLDSSVIKPLIEKYYFENHEQAYKNFKEQFKNNKIVELTTPDQLNETFWVKLHNPSQSTVIIEAFNDISGVDSV VDQRQYLNQIFYILNLASVTSISIAAVMLIAAVMLIATTIRLSAFTRRKEIEIMRLVGASNFFVQAPFVLEGIFAASIGA LLSSIAIVSIAQFFITDYLAIKLPVVSFFSVGDSLIIVPIIFGIAILLSGLSAKFSISRSLRV >Mature_303_residues MFTFILSELIHNVRRSASMVSSVIIVTFISLTFVGTAALMQLQIVHMKSFWYDRAQVAIFLCTEHSSQSTCSAGKATEEQ KDSVRQRLDSSVIKPLIEKYYFENHEQAYKNFKEQFKNNKIVELTTPDQLNETFWVKLHNPSQSTVIIEAFNDISGVDSV VDQRQYLNQIFYILNLASVTSISIAAVMLIAAVMLIATTIRLSAFTRRKEIEIMRLVGASNFFVQAPFVLEGIFAASIGA LLSSIAIVSIAQFFITDYLAIKLPVVSFFSVGDSLIIVPIIFGIAILLSGLSAKFSISRSLRV
Specific function: Not Known. Is Coded In An Operon Essential For Cell Division. [C]
COG id: COG2177
COG function: function code D; Cell division protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-4 integral membrane protein family. FtsX subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003838 [H]
Pfam domain/function: PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 33818; Mature: 33818
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTFILSELIHNVRRSASMVSSVIIVTFISLTFVGTAALMQLQIVHMKSFWYDRAQVAIF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE LCTEHSSQSTCSAGKATEEQKDSVRQRLDSSVIKPLIEKYYFENHEQAYKNFKEQFKNNK EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC IVELTTPDQLNETFWVKLHNPSQSTVIIEAFNDISGVDSVVDQRQYLNQIFYILNLASVT EEEECCCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SISIAAVMLIAAVMLIATTIRLSAFTRRKEIEIMRLVGASNFFVQAPFVLEGIFAASIGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHH LLSSIAIVSIAQFFITDYLAIKLPVVSFFSVGDSLIIVPIIFGIAILLSGLSAKFSISRS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEHHCC LRV CCC >Mature Secondary Structure MFTFILSELIHNVRRSASMVSSVIIVTFISLTFVGTAALMQLQIVHMKSFWYDRAQVAIF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE LCTEHSSQSTCSAGKATEEQKDSVRQRLDSSVIKPLIEKYYFENHEQAYKNFKEQFKNNK EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC IVELTTPDQLNETFWVKLHNPSQSTVIIEAFNDISGVDSVVDQRQYLNQIFYILNLASVT EEEECCCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SISIAAVMLIAAVMLIATTIRLSAFTRRKEIEIMRLVGASNFFVQAPFVLEGIFAASIGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHH LLSSIAIVSIAQFFITDYLAIKLPVVSFFSVGDSLIIVPIIFGIAILLSGLSAKFSISRS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEHHCC LRV CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]