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The map label for this gene is secF [H]

Identifier: 28572647

GI number: 28572647

Start: 537313

End: 538281

Strand: Reverse

Name: secF [H]

Synonym: TW498

Alternate gene names: 28572647

Gene position: 538281-537313 (Counterclockwise)

Preceding gene: 28572648

Following gene: 28572646

Centisome position: 58.13

GC content: 43.45

Gene sequence:

>969_bases
ATGGCGTGGTTTGCGCGGTTTAGTGACGATCTTTACAGTGGACGGAGATCAATAGACTTCGTTGGTCGGTATAAGATATG
GTATTCCGCGTCTTTTGTTATTCTTCTTGTCGCAATTCTCGGACCGTTCTTTCACGGTGGATACAAATTTGGCATTGAAT
TCACCGGAGGTTCTCAGTTTGTTATTTCTGATGTGAAGCAAAAAAGCATTGAGCTTGCGAGAGAAGTAGTGAAGAAAACT
GTAGACAAGCCATCTGTTGTGACAACTTTCGGTAAGGGCCTTGTTGTAAGAACAGATCAGCTATCAGATACTCAGTCAAA
TAGTGTGCGTGATGCCCTTGCCGATACGTATGGGGTGTCACATGACGCGGTCGCGGCATCATACATTGGTCCAAGTTGGG
GGCAAGACGTTACAAGACAGGGAATACAGGGGCTTGTTATTTTTTTGCTCCTTGTCTTTGTTGTTATGGCACTTTACTTC
AGAACTTGGAGGATGTCCCTATCGGCTATTATTGCGCTTTTTCACGACCTTATCATCACAGCTGGTATTTACGGTTTGTT
GGGTCTTGAAATAACTCCTGCTGCAGTTATTGGCTTATTGACAATTCTCGGATATTCACTCTATGACACCGTTGTTGTCT
TTGATAGGGTACGTGAAAATAGGGCTCTTGATCCAACTTGCTCGGATTATAAGGGGATAGTGAATAGGGCAGTCAATCAG
ACGTTTGTCAGGTCTATTAATACTTCTCTTATAGCAGTTTTACCGGTTGCTTCGATATTGTTCATTGGCTCTTTGATCCT
TGGTGCAAGTACGCTGAGTGATATATCTGTTGCACTTTTTATCGGAATGCTGGCCGGTGCGTATTCAACAATTGTTATAG
CTTCTCCAACATATGCTTTGTTATGCAAGAAATTACCTTCGGGGAAAGAGAAGCGTCTAAGAAAAGCACCTGTCAAGGCG
CCGGGTTGA

Upstream 100 bases:

>100_bases
AATACAGTGGTTTGAATGTTAAATCAGCTGTTTACAGGGGTAGGCTTATGACGCGTGATAAATCTCAAAAGACGATAGCA
GAGCGAAAGGCCGGGCATTA

Downstream 100 bases:

>100_bases
TGTATGTCCTATTCATAGTTGCCTGAGATCTGTATAAAACCGCGCACGTTCTAGTACACAGGCTGCTGAAATGCTTGGAA
TCCTTTCGAGTGCGTTTTGA

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MAWFARFSDDLYSGRRSIDFVGRYKIWYSASFVILLVAILGPFFHGGYKFGIEFTGGSQFVISDVKQKSIELAREVVKKT
VDKPSVVTTFGKGLVVRTDQLSDTQSNSVRDALADTYGVSHDAVAASYIGPSWGQDVTRQGIQGLVIFLLLVFVVMALYF
RTWRMSLSAIIALFHDLIITAGIYGLLGLEITPAAVIGLLTILGYSLYDTVVVFDRVRENRALDPTCSDYKGIVNRAVNQ
TFVRSINTSLIAVLPVASILFIGSLILGASTLSDISVALFIGMLAGAYSTIVIASPTYALLCKKLPSGKEKRLRKAPVKA
PG

Sequences:

>Translated_322_residues
MAWFARFSDDLYSGRRSIDFVGRYKIWYSASFVILLVAILGPFFHGGYKFGIEFTGGSQFVISDVKQKSIELAREVVKKT
VDKPSVVTTFGKGLVVRTDQLSDTQSNSVRDALADTYGVSHDAVAASYIGPSWGQDVTRQGIQGLVIFLLLVFVVMALYF
RTWRMSLSAIIALFHDLIITAGIYGLLGLEITPAAVIGLLTILGYSLYDTVVVFDRVRENRALDPTCSDYKGIVNRAVNQ
TFVRSINTSLIAVLPVASILFIGSLILGASTLSDISVALFIGMLAGAYSTIVIASPTYALLCKKLPSGKEKRLRKAPVKA
PG
>Mature_321_residues
AWFARFSDDLYSGRRSIDFVGRYKIWYSASFVILLVAILGPFFHGGYKFGIEFTGGSQFVISDVKQKSIELAREVVKKTV
DKPSVVTTFGKGLVVRTDQLSDTQSNSVRDALADTYGVSHDAVAASYIGPSWGQDVTRQGIQGLVIFLLLVFVVMALYFR
TWRMSLSAIIALFHDLIITAGIYGLLGLEITPAAVIGLLTILGYSLYDTVVVFDRVRENRALDPTCSDYKGIVNRAVNQT
FVRSINTSLIAVLPVASILFIGSLILGASTLSDISVALFIGMLAGAYSTIVIASPTYALLCKKLPSGKEKRLRKAPVKAP
G

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=320, Percent_Identity=29.0625, Blast_Score=114, Evalue=6e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 35042; Mature: 34911

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWFARFSDDLYSGRRSIDFVGRYKIWYSASFVILLVAILGPFFHGGYKFGIEFTGGSQF
CCCHHHHHHHHHCCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHH
VISDVKQKSIELAREVVKKTVDKPSVVTTFGKGLVVRTDQLSDTQSNSVRDALADTYGVS
HHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCC
HDAVAASYIGPSWGQDVTRQGIQGLVIFLLLVFVVMALYFRTWRMSLSAIIALFHDLIIT
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGIYGLLGLEITPAAVIGLLTILGYSLYDTVVVFDRVRENRALDPTCSDYKGIVNRAVNQ
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
TFVRSINTSLIAVLPVASILFIGSLILGASTLSDISVALFIGMLAGAYSTIVIASPTYAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHH
LCKKLPSGKEKRLRKAPVKAPG
HHHHCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
AWFARFSDDLYSGRRSIDFVGRYKIWYSASFVILLVAILGPFFHGGYKFGIEFTGGSQF
CCHHHHHHHHHCCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHH
VISDVKQKSIELAREVVKKTVDKPSVVTTFGKGLVVRTDQLSDTQSNSVRDALADTYGVS
HHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCC
HDAVAASYIGPSWGQDVTRQGIQGLVIFLLLVFVVMALYFRTWRMSLSAIIALFHDLIIT
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGIYGLLGLEITPAAVIGLLTILGYSLYDTVVVFDRVRENRALDPTCSDYKGIVNRAVNQ
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
TFVRSINTSLIAVLPVASILFIGSLILGASTLSDISVALFIGMLAGAYSTIVIASPTYAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHH
LCKKLPSGKEKRLRKAPVKAPG
HHHHCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]