| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is pstA [H]
Identifier: 28572569
GI number: 28572569
Start: 455068
End: 455961
Strand: Direct
Name: pstA [H]
Synonym: TW417
Alternate gene names: 28572569
Gene position: 455068-455961 (Clockwise)
Preceding gene: 28572568
Following gene: 28572570
Centisome position: 49.15
GC content: 43.74
Gene sequence:
>894_bases ATGACTAAGTTACCTCCGCGTAAAAATATGCACAAGAGACGTGTAAGAAATAGGGTGTTTACCTGTGTTGTTTACGCTTC TTTTGTAATCGCGATATTACCCCTTCTGTCACTTTTTTATACGACGATTGCAAGTGGTTTAGGACGCTTTGATATTGCAT TTTTTACACGTACCATGGATGGCACTGTTAACGCTGGAGGTGGTGCCTTGCATGCAATTATGGGCAGTTTTGAAATAACA ATACTTGCAGCTCTAATCGGTATTCCACTTGGCTTATTGGTTGCAATTTTTTTAGTTGAGTATGGGTCTGGGGGTTTTTT GTCTCGCACAGTTGCCCTCGGGGTGGATGTAATGGCCGGCATACCATCGATTGTTGTTGGACTTTTTGTATATGCCTTTT TTAGTCTTGTTCTTGATCAACCCGGTATCCGCTCGGGCTTTCTGGGCGCTGTTGCGCTCTCCATTTTGATGTTACCGATA GTCATACGCTCTGCGGTTGAAGTCTTGAGACTTGTCCCAAATGACCTCAGAGAAGCGGCTTATGCCCTGGGAACTCCAAA ATGGCGGACAATACTTTTTATCGTTTTACCAACTGCTTTTTCTGGTATTGCCACTGGTTCAGCCCTTGCAATTGCGCGAG CAGTCGGAGAAACTGCACCTCTTTTGATTGTTGCAGGTTTTACCAATTCGCTTAATCTAAACCCGTTTGTAGGGCGCATG ATGACCCTCCCTGTTTATGTCTACACACAATACTCATCTCCTGGTGTCGATGTAGGCGCATTTTTGGATAGGTCGTGGTC AGCAGCTCTTGTTCTTATTGCAATTGCAGTCTCTTTTTATATCTTAGCTCAGATAGTTTCTAAAATGATTGCCCCAAAAT CTACGAATCGTTGA
Upstream 100 bases:
>100_bases GAATCGTCAGATTAAAGTCCTAAGAGGTATATAAGCTGGGCATTTGATATATGAGTAAAAGATGTGCGCACTTGCTTCGT GAGATCCTTAGGGTCCAGGA
Downstream 100 bases:
>100_bases GAAGGGTTATATGACTTCATTACTGGAAATAAAAGATTTAACCGCCTTTTACGGGCCATTGAGAGCTATAAAAGATGTTT CGCTCTCGATACAAGAGGGG
Product: phosphate ABC transporter permease
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MTKLPPRKNMHKRRVRNRVFTCVVYASFVIAILPLLSLFYTTIASGLGRFDIAFFTRTMDGTVNAGGGALHAIMGSFEIT ILAALIGIPLGLLVAIFLVEYGSGGFLSRTVALGVDVMAGIPSIVVGLFVYAFFSLVLDQPGIRSGFLGAVALSILMLPI VIRSAVEVLRLVPNDLREAAYALGTPKWRTILFIVLPTAFSGIATGSALAIARAVGETAPLLIVAGFTNSLNLNPFVGRM MTLPVYVYTQYSSPGVDVGAFLDRSWSAALVLIAIAVSFYILAQIVSKMIAPKSTNR
Sequences:
>Translated_297_residues MTKLPPRKNMHKRRVRNRVFTCVVYASFVIAILPLLSLFYTTIASGLGRFDIAFFTRTMDGTVNAGGGALHAIMGSFEIT ILAALIGIPLGLLVAIFLVEYGSGGFLSRTVALGVDVMAGIPSIVVGLFVYAFFSLVLDQPGIRSGFLGAVALSILMLPI VIRSAVEVLRLVPNDLREAAYALGTPKWRTILFIVLPTAFSGIATGSALAIARAVGETAPLLIVAGFTNSLNLNPFVGRM MTLPVYVYTQYSSPGVDVGAFLDRSWSAALVLIAIAVSFYILAQIVSKMIAPKSTNR >Mature_296_residues TKLPPRKNMHKRRVRNRVFTCVVYASFVIAILPLLSLFYTTIASGLGRFDIAFFTRTMDGTVNAGGGALHAIMGSFEITI LAALIGIPLGLLVAIFLVEYGSGGFLSRTVALGVDVMAGIPSIVVGLFVYAFFSLVLDQPGIRSGFLGAVALSILMLPIV IRSAVEVLRLVPNDLREAAYALGTPKWRTILFIVLPTAFSGIATGSALAIARAVGETAPLLIVAGFTNSLNLNPFVGRMM TLPVYVYTQYSSPGVDVGAFLDRSWSAALVLIAIAVSFYILAQIVSKMIAPKSTNR
Specific function: Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0581
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790163, Length=280, Percent_Identity=37.5, Blast_Score=171, Evalue=7e-44, Organism=Escherichia coli, GI1790164, Length=255, Percent_Identity=29.8039215686275, Blast_Score=80, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005672 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31707; Mature: 31576
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLPPRKNMHKRRVRNRVFTCVVYASFVIAILPLLSLFYTTIASGLGRFDIAFFTRTMD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC GTVNAGGGALHAIMGSFEITILAALIGIPLGLLVAIFLVEYGSGGFLSRTVALGVDVMAG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC IPSIVVGLFVYAFFSLVLDQPGIRSGFLGAVALSILMLPIVIRSAVEVLRLVPNDLREAA HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH YALGTPKWRTILFIVLPTAFSGIATGSALAIARAVGETAPLLIVAGFTNSLNLNPFVGRM HHHCCCCHHHEEEEEHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHH MTLPVYVYTQYSSPGVDVGAFLDRSWSAALVLIAIAVSFYILAQIVSKMIAPKSTNR HHCEEEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TKLPPRKNMHKRRVRNRVFTCVVYASFVIAILPLLSLFYTTIASGLGRFDIAFFTRTMD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC GTVNAGGGALHAIMGSFEITILAALIGIPLGLLVAIFLVEYGSGGFLSRTVALGVDVMAG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC IPSIVVGLFVYAFFSLVLDQPGIRSGFLGAVALSILMLPIVIRSAVEVLRLVPNDLREAA HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH YALGTPKWRTILFIVLPTAFSGIATGSALAIARAVGETAPLLIVAGFTNSLNLNPFVGRM HHHCCCCHHHEEEEEHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHH MTLPVYVYTQYSSPGVDVGAFLDRSWSAALVLIAIAVSFYILAQIVSKMIAPKSTNR HHCEEEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]