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The map label for this gene is rpmC

Identifier: 28572375

GI number: 28572375

Start: 248316

End: 248555

Strand: Direct

Name: rpmC

Synonym: TW215

Alternate gene names: 28572375

Gene position: 248316-248555 (Clockwise)

Preceding gene: 28572374

Following gene: 28572376

Centisome position: 26.82

GC content: 50.0

Gene sequence:

>240_bases
ATGCTGGGCTCTAAGGGTTTGTCTCCCACCGATCTGAGAGGCATGACGGATGGTCATTTGCGAGTTGAGCTGAAAAATGC
AAAAGAAGAGGTCTTCAAGCTTCGGTTCCAATCTGCAACCGGGCAGCTCGCGCACAATGCGCGTTTGCGTGCTGTGCGTC
GCGATATAGCACGGATCTATACTGTTATGCGTGAAAGAGATATTGGCATTCGAAGCGTTCAGGAAGAGGTTAGTCAATGA

Upstream 100 bases:

>100_bases
GTTTCGGGGGTTTCTGAGTCGCTTGCAAAAGAGGCTTTAATGAGGGCGATTCACAAGCTGCCCCTGCGCGCAAGAATTGT
TGAGAGGCAGGAGTTTGATG

Downstream 100 bases:

>100_bases
GCCAGCAGCGCGGGTACCGCAAGTCGCGCCGTGGGTATGTTACGAGCAACAGTATGGATAAGACTATTGTTGTAAAAATA
GAGGATCGTGTCAAACATGC

Product: 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MLGSKGLSPTDLRGMTDGHLRVELKNAKEEVFKLRFQSATGQLAHNARLRAVRRDIARIYTVMRERDIGIRSVQEEVSQ

Sequences:

>Translated_79_residues
MLGSKGLSPTDLRGMTDGHLRVELKNAKEEVFKLRFQSATGQLAHNARLRAVRRDIARIYTVMRERDIGIRSVQEEVSQ
>Mature_79_residues
MLGSKGLSPTDLRGMTDGHLRVELKNAKEEVFKLRFQSATGQLAHNARLRAVRRDIARIYTVMRERDIGIRSVQEEVSQ

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL29_TROW8 (Q83I70)

Other databases:

- EMBL:   BX251410
- RefSeq:   NP_789155.1
- ProteinModelPortal:   Q83I70
- SMR:   Q83I70
- STRING:   Q83I70
- GeneID:   1064507
- GenomeReviews:   BX072543_GR
- KEGG:   tws:TW215
- eggNOG:   COG0255
- HOGENOM:   HBG730819
- OMA:   RERDIGI
- ProtClustDB:   PRK00306
- BioCyc:   TWHI218496:TW0200-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00374_B
- InterPro:   IPR001854
- Gene3D:   G3DSA:1.10.287.310
- TIGRFAMs:   TIGR00012

Pfam domain/function: PF00831 Ribosomal_L29; SSF46561 Ribosomal_L29

EC number: NA

Molecular weight: Translated: 9009; Mature: 9009

Theoretical pI: Translated: 11.10; Mature: 11.10

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGSKGLSPTDLRGMTDGHLRVELKNAKEEVFKLRFQSATGQLAHNARLRAVRRDIARIY
CCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
TVMRERDIGIRSVQEEVSQ
HHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure
MLGSKGLSPTDLRGMTDGHLRVELKNAKEEVFKLRFQSATGQLAHNARLRAVRRDIARIY
CCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
TVMRERDIGIRSVQEEVSQ
HHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12606174