Definition Tropheryma whipplei TW08/27, complete genome.
Accession NC_004551
Length 925,938

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The map label for this gene is rimI [C]

Identifier: 28572331

GI number: 28572331

Start: 208351

End: 209856

Strand: Direct

Name: rimI [C]

Synonym: TW169

Alternate gene names: 28572331

Gene position: 208351-209856 (Clockwise)

Preceding gene: 28572330

Following gene: 28572332

Centisome position: 22.5

GC content: 46.61

Gene sequence:

>1506_bases
ATGAAGATTTTGGCAATAGATACATCCTCGCGCTTGGCTATTGCGTGCCTCGAAATTGACAATAATCGTATTACAACGGT
TGGGAAGTGTATAGAGGATTCTGGCCGTCTGCATTCAGAACTTATAGCAGAGGCAATCAGTCAGGCATGTTCAGAGCTGC
AGTCATTATCATTTATCGCTGTTTGCTTGGGTCCGGGGTTCTATACAGGTTTGAGGTCTGGCTTGGTTGCTGCGCGCATC
CTTGGACTGTCGTTATCTATCCCTGTTTACGGTGTCATGGCGCATGATGCGATTTATATGGGTTATCTCTCTTGCGAAGA
ACATGTTTTCTGCGACCGAGGGTTGCATACATCGCAGGTTTTTTCACATCATGAACCTGTCAGCAAAAGCGCCGATGGAG
CCAATCATGAAGAATTCTGTGACAGGAATACATATTCCATGGGCGACGCTATACATCGAAATGTGCCATCTATTGCAAGA
ACAATTATTACACCAGCGGGTCGCAGGCAGTTTTATTGGAGTCGCTATACGGGACTTGATAATGACGGACTACCTATTAT
TTATGCAGGTCCAGGACTAATCGATTCTTGCGATATAAATATTTTGTCTCAGGACTTCCCGTTCAATCCGGTATTTGTTG
CAAGCGCACACGAACCCCAGTTTGAGGCACAGAAAGAGTCAAATGGCACGTTAACCGGATCGCCAAGACCGCGCCGGACA
GGGCGGCATATCGATCGGGGTTCCTGTCCACCAAATGTGTCATCTACAATACCCCCCGGAATATTCCGCGCACGAGTTCC
GCAAGCACACGACTGCGCAATCAACGTAGTGTCAAAAAATTCAATGCGTGAAACAGATACTCTAAAAACAGACGCCTCGA
TTGACAAATCGATCACATCTGACCGTCCGAATACCCAACCCATCCTGCCTGTTAGCGCTGTTAATCCTGTTATCTTGGGT
AAGTTGGCGTATTTGCAACTCAAGGCAAAAAGGGCCTGTTCAAGGATTGAACCATTCTATATGCGCCGTGCCGATGTAAC
TCTTAGGGTGCCATCGGGCGAAATCAATAAGGATTTAGTCTCTATTCACCCCGCGTCCTTACATGATTTGCCCGATATTA
TGAAGATTGAACGCGGGTCCTTTACCGGGGAAGAATGGTCATCTGCGACCATGCTACAGCAGCTGCGCTTGGGTAGCTAT
TTTGTGCTAAAGGTCAGCGATATGCCGGTTGGGTATGCCGGGATATCGCACCCGAGGTTTGAGGATGTTGATCTTGAAAC
ATTAGCGATTGATCCTGCTTGGCGTCGTAAGGGATTGGGGGGTATTTTATTGCGACATCTCTTTGAATATGCGAGAGATG
CTGGCGTGAAAAGGTGTTTTTTGGAAGTCAAGGTGTGTAATCTTCCAGCTATTGGAATGTATAAAAAACACGGTTTTGTT
ACCCTGGGTCGGCGACCAAAGTACTATAACGGCGTTGATGCAATAACTATGAAGAAAGAGTTATAG

Upstream 100 bases:

>100_bases
CAAAGGGTTTTGATATCAAAGAACTTGCATTCATAACCCACACAATGTCTCAGTCACACACAATGTCTCAGTCACAGTAG
GGCACTCACGCAGTAGGCGT

Downstream 100 bases:

>100_bases
TGTCTATTATCCTCGGAATCGAAACATCTTGCGATGAAACAGGTGTTGGCATAGTGTCTGGTTCAACTGTTCTTGCAAAT
GAGGTTGCCTCATCAAGCTT

Product: hypothetical protein

Products: CoA +ribosomal-protein N-acetyl-L-alanine [C]

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 501

Protein sequence:

>501_residues
MKILAIDTSSRLAIACLEIDNNRITTVGKCIEDSGRLHSELIAEAISQACSELQSLSFIAVCLGPGFYTGLRSGLVAARI
LGLSLSIPVYGVMAHDAIYMGYLSCEEHVFCDRGLHTSQVFSHHEPVSKSADGANHEEFCDRNTYSMGDAIHRNVPSIAR
TIITPAGRRQFYWSRYTGLDNDGLPIIYAGPGLIDSCDINILSQDFPFNPVFVASAHEPQFEAQKESNGTLTGSPRPRRT
GRHIDRGSCPPNVSSTIPPGIFRARVPQAHDCAINVVSKNSMRETDTLKTDASIDKSITSDRPNTQPILPVSAVNPVILG
KLAYLQLKAKRACSRIEPFYMRRADVTLRVPSGEINKDLVSIHPASLHDLPDIMKIERGSFTGEEWSSATMLQQLRLGSY
FVLKVSDMPVGYAGISHPRFEDVDLETLAIDPAWRRKGLGGILLRHLFEYARDAGVKRCFLEVKVCNLPAIGMYKKHGFV
TLGRRPKYYNGVDAITMKKEL

Sequences:

>Translated_501_residues
MKILAIDTSSRLAIACLEIDNNRITTVGKCIEDSGRLHSELIAEAISQACSELQSLSFIAVCLGPGFYTGLRSGLVAARI
LGLSLSIPVYGVMAHDAIYMGYLSCEEHVFCDRGLHTSQVFSHHEPVSKSADGANHEEFCDRNTYSMGDAIHRNVPSIAR
TIITPAGRRQFYWSRYTGLDNDGLPIIYAGPGLIDSCDINILSQDFPFNPVFVASAHEPQFEAQKESNGTLTGSPRPRRT
GRHIDRGSCPPNVSSTIPPGIFRARVPQAHDCAINVVSKNSMRETDTLKTDASIDKSITSDRPNTQPILPVSAVNPVILG
KLAYLQLKAKRACSRIEPFYMRRADVTLRVPSGEINKDLVSIHPASLHDLPDIMKIERGSFTGEEWSSATMLQQLRLGSY
FVLKVSDMPVGYAGISHPRFEDVDLETLAIDPAWRRKGLGGILLRHLFEYARDAGVKRCFLEVKVCNLPAIGMYKKHGFV
TLGRRPKYYNGVDAITMKKEL
>Mature_501_residues
MKILAIDTSSRLAIACLEIDNNRITTVGKCIEDSGRLHSELIAEAISQACSELQSLSFIAVCLGPGFYTGLRSGLVAARI
LGLSLSIPVYGVMAHDAIYMGYLSCEEHVFCDRGLHTSQVFSHHEPVSKSADGANHEEFCDRNTYSMGDAIHRNVPSIAR
TIITPAGRRQFYWSRYTGLDNDGLPIIYAGPGLIDSCDINILSQDFPFNPVFVASAHEPQFEAQKESNGTLTGSPRPRRT
GRHIDRGSCPPNVSSTIPPGIFRARVPQAHDCAINVVSKNSMRETDTLKTDASIDKSITSDRPNTQPILPVSAVNPVILG
KLAYLQLKAKRACSRIEPFYMRRADVTLRVPSGEINKDLVSIHPASLHDLPDIMKIERGSFTGEEWSSATMLQQLRLGSY
FVLKVSDMPVGYAGISHPRFEDVDLETLAIDPAWRRKGLGGILLRHLFEYARDAGVKRCFLEVKVCNLPAIGMYKKHGFV
TLGRRPKYYNGVDAITMKKEL

Specific function: This Enzyme Acetylates The N-Terminal Alanine Of Ribosomal Protein S18. [C]

COG id: COG0456

COG function: function code R; Acetyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR022496
- InterPro:   IPR000905
- InterPro:   IPR006464 [H]

Pfam domain/function: PF00583 Acetyltransf_1; PF00814 Peptidase_M22 [H]

EC number: 2.3.1.128 [C]

Molecular weight: Translated: 55306; Mature: 55306

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILAIDTSSRLAIACLEIDNNRITTVGKCIEDSGRLHSELIAEAISQACSELQSLSFIA
CEEEEEECCCCEEEEEEEECCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEE
VCLGPGFYTGLRSGLVAARILGLSLSIPVYGVMAHDAIYMGYLSCEEHVFCDRGLHTSQV
EECCCHHHHHHHHHHHHHHHHHEEECCCEEEEEHHCEEEEEEECCCCCCHHCCCCCHHHH
FSHHEPVSKSADGANHEEFCDRNTYSMGDAIHRNVPSIARTIITPAGRRQFYWSRYTGLD
HHCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHCCHHHHHHHHCCCCCCEEEEHHCCCCC
NDGLPIIYAGPGLIDSCDINILSQDFPFNPVFVASAHEPQFEAQKESNGTLTGSPRPRRT
CCCCEEEEECCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCHHCCCCEECCCCCCCCC
GRHIDRGSCPPNVSSTIPPGIFRARVPQAHDCAINVVSKNSMRETDTLKTDASIDKSITS
CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEECCCCCHHHCCCCCCCHHHHHCC
DRPNTQPILPVSAVNPVILGKLAYLQLKAKRACSRIEPFYMRRADVTLRVPSGEINKDLV
CCCCCCCEEEHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHEEECCEEEECCCCCCCCCCE
SIHPASLHDLPDIMKIERGSFTGEEWSSATMLQQLRLGSYFVLKVSDMPVGYAGISHPRF
EECCCHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCC
EDVDLETLAIDPAWRRKGLGGILLRHLFEYARDAGVKRCFLEVKVCNLPAIGMYKKHGFV
CCCCCEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCEEECCCEE
TLGRRPKYYNGVDAITMKKEL
EECCCCCCCCCCCEEEEECCC
>Mature Secondary Structure
MKILAIDTSSRLAIACLEIDNNRITTVGKCIEDSGRLHSELIAEAISQACSELQSLSFIA
CEEEEEECCCCEEEEEEEECCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEE
VCLGPGFYTGLRSGLVAARILGLSLSIPVYGVMAHDAIYMGYLSCEEHVFCDRGLHTSQV
EECCCHHHHHHHHHHHHHHHHHEEECCCEEEEEHHCEEEEEEECCCCCCHHCCCCCHHHH
FSHHEPVSKSADGANHEEFCDRNTYSMGDAIHRNVPSIARTIITPAGRRQFYWSRYTGLD
HHCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHCCHHHHHHHHCCCCCCEEEEHHCCCCC
NDGLPIIYAGPGLIDSCDINILSQDFPFNPVFVASAHEPQFEAQKESNGTLTGSPRPRRT
CCCCEEEEECCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCHHCCCCEECCCCCCCCC
GRHIDRGSCPPNVSSTIPPGIFRARVPQAHDCAINVVSKNSMRETDTLKTDASIDKSITS
CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEECCCCCHHHCCCCCCCHHHHHCC
DRPNTQPILPVSAVNPVILGKLAYLQLKAKRACSRIEPFYMRRADVTLRVPSGEINKDLV
CCCCCCCEEEHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHEEECCEEEECCCCCCCCCCE
SIHPASLHDLPDIMKIERGSFTGEEWSSATMLQQLRLGSYFVLKVSDMPVGYAGISHPRF
EECCCHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCC
EDVDLETLAIDPAWRRKGLGGILLRHLFEYARDAGVKRCFLEVKVCNLPAIGMYKKHGFV
CCCCCEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCEEECCCEE
TLGRRPKYYNGVDAITMKKEL
EECCCCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acetyl-CoA; ribosomal-protein L-alanine [C]

Specific reaction: Acetyl-CoA + ribosomal-protein L-alanine = CoA +ribosomal-protein N-acetyl-L-alanine [C]

General reaction: Acyl group transfer [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]