| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is rimI [C]
Identifier: 28572331
GI number: 28572331
Start: 208351
End: 209856
Strand: Direct
Name: rimI [C]
Synonym: TW169
Alternate gene names: 28572331
Gene position: 208351-209856 (Clockwise)
Preceding gene: 28572330
Following gene: 28572332
Centisome position: 22.5
GC content: 46.61
Gene sequence:
>1506_bases ATGAAGATTTTGGCAATAGATACATCCTCGCGCTTGGCTATTGCGTGCCTCGAAATTGACAATAATCGTATTACAACGGT TGGGAAGTGTATAGAGGATTCTGGCCGTCTGCATTCAGAACTTATAGCAGAGGCAATCAGTCAGGCATGTTCAGAGCTGC AGTCATTATCATTTATCGCTGTTTGCTTGGGTCCGGGGTTCTATACAGGTTTGAGGTCTGGCTTGGTTGCTGCGCGCATC CTTGGACTGTCGTTATCTATCCCTGTTTACGGTGTCATGGCGCATGATGCGATTTATATGGGTTATCTCTCTTGCGAAGA ACATGTTTTCTGCGACCGAGGGTTGCATACATCGCAGGTTTTTTCACATCATGAACCTGTCAGCAAAAGCGCCGATGGAG CCAATCATGAAGAATTCTGTGACAGGAATACATATTCCATGGGCGACGCTATACATCGAAATGTGCCATCTATTGCAAGA ACAATTATTACACCAGCGGGTCGCAGGCAGTTTTATTGGAGTCGCTATACGGGACTTGATAATGACGGACTACCTATTAT TTATGCAGGTCCAGGACTAATCGATTCTTGCGATATAAATATTTTGTCTCAGGACTTCCCGTTCAATCCGGTATTTGTTG CAAGCGCACACGAACCCCAGTTTGAGGCACAGAAAGAGTCAAATGGCACGTTAACCGGATCGCCAAGACCGCGCCGGACA GGGCGGCATATCGATCGGGGTTCCTGTCCACCAAATGTGTCATCTACAATACCCCCCGGAATATTCCGCGCACGAGTTCC GCAAGCACACGACTGCGCAATCAACGTAGTGTCAAAAAATTCAATGCGTGAAACAGATACTCTAAAAACAGACGCCTCGA TTGACAAATCGATCACATCTGACCGTCCGAATACCCAACCCATCCTGCCTGTTAGCGCTGTTAATCCTGTTATCTTGGGT AAGTTGGCGTATTTGCAACTCAAGGCAAAAAGGGCCTGTTCAAGGATTGAACCATTCTATATGCGCCGTGCCGATGTAAC TCTTAGGGTGCCATCGGGCGAAATCAATAAGGATTTAGTCTCTATTCACCCCGCGTCCTTACATGATTTGCCCGATATTA TGAAGATTGAACGCGGGTCCTTTACCGGGGAAGAATGGTCATCTGCGACCATGCTACAGCAGCTGCGCTTGGGTAGCTAT TTTGTGCTAAAGGTCAGCGATATGCCGGTTGGGTATGCCGGGATATCGCACCCGAGGTTTGAGGATGTTGATCTTGAAAC ATTAGCGATTGATCCTGCTTGGCGTCGTAAGGGATTGGGGGGTATTTTATTGCGACATCTCTTTGAATATGCGAGAGATG CTGGCGTGAAAAGGTGTTTTTTGGAAGTCAAGGTGTGTAATCTTCCAGCTATTGGAATGTATAAAAAACACGGTTTTGTT ACCCTGGGTCGGCGACCAAAGTACTATAACGGCGTTGATGCAATAACTATGAAGAAAGAGTTATAG
Upstream 100 bases:
>100_bases CAAAGGGTTTTGATATCAAAGAACTTGCATTCATAACCCACACAATGTCTCAGTCACACACAATGTCTCAGTCACAGTAG GGCACTCACGCAGTAGGCGT
Downstream 100 bases:
>100_bases TGTCTATTATCCTCGGAATCGAAACATCTTGCGATGAAACAGGTGTTGGCATAGTGTCTGGTTCAACTGTTCTTGCAAAT GAGGTTGCCTCATCAAGCTT
Product: hypothetical protein
Products: CoA +ribosomal-protein N-acetyl-L-alanine [C]
Alternate protein names: NA
Number of amino acids: Translated: 501; Mature: 501
Protein sequence:
>501_residues MKILAIDTSSRLAIACLEIDNNRITTVGKCIEDSGRLHSELIAEAISQACSELQSLSFIAVCLGPGFYTGLRSGLVAARI LGLSLSIPVYGVMAHDAIYMGYLSCEEHVFCDRGLHTSQVFSHHEPVSKSADGANHEEFCDRNTYSMGDAIHRNVPSIAR TIITPAGRRQFYWSRYTGLDNDGLPIIYAGPGLIDSCDINILSQDFPFNPVFVASAHEPQFEAQKESNGTLTGSPRPRRT GRHIDRGSCPPNVSSTIPPGIFRARVPQAHDCAINVVSKNSMRETDTLKTDASIDKSITSDRPNTQPILPVSAVNPVILG KLAYLQLKAKRACSRIEPFYMRRADVTLRVPSGEINKDLVSIHPASLHDLPDIMKIERGSFTGEEWSSATMLQQLRLGSY FVLKVSDMPVGYAGISHPRFEDVDLETLAIDPAWRRKGLGGILLRHLFEYARDAGVKRCFLEVKVCNLPAIGMYKKHGFV TLGRRPKYYNGVDAITMKKEL
Sequences:
>Translated_501_residues MKILAIDTSSRLAIACLEIDNNRITTVGKCIEDSGRLHSELIAEAISQACSELQSLSFIAVCLGPGFYTGLRSGLVAARI LGLSLSIPVYGVMAHDAIYMGYLSCEEHVFCDRGLHTSQVFSHHEPVSKSADGANHEEFCDRNTYSMGDAIHRNVPSIAR TIITPAGRRQFYWSRYTGLDNDGLPIIYAGPGLIDSCDINILSQDFPFNPVFVASAHEPQFEAQKESNGTLTGSPRPRRT GRHIDRGSCPPNVSSTIPPGIFRARVPQAHDCAINVVSKNSMRETDTLKTDASIDKSITSDRPNTQPILPVSAVNPVILG KLAYLQLKAKRACSRIEPFYMRRADVTLRVPSGEINKDLVSIHPASLHDLPDIMKIERGSFTGEEWSSATMLQQLRLGSY FVLKVSDMPVGYAGISHPRFEDVDLETLAIDPAWRRKGLGGILLRHLFEYARDAGVKRCFLEVKVCNLPAIGMYKKHGFV TLGRRPKYYNGVDAITMKKEL >Mature_501_residues MKILAIDTSSRLAIACLEIDNNRITTVGKCIEDSGRLHSELIAEAISQACSELQSLSFIAVCLGPGFYTGLRSGLVAARI LGLSLSIPVYGVMAHDAIYMGYLSCEEHVFCDRGLHTSQVFSHHEPVSKSADGANHEEFCDRNTYSMGDAIHRNVPSIAR TIITPAGRRQFYWSRYTGLDNDGLPIIYAGPGLIDSCDINILSQDFPFNPVFVASAHEPQFEAQKESNGTLTGSPRPRRT GRHIDRGSCPPNVSSTIPPGIFRARVPQAHDCAINVVSKNSMRETDTLKTDASIDKSITSDRPNTQPILPVSAVNPVILG KLAYLQLKAKRACSRIEPFYMRRADVTLRVPSGEINKDLVSIHPASLHDLPDIMKIERGSFTGEEWSSATMLQQLRLGSY FVLKVSDMPVGYAGISHPRFEDVDLETLAIDPAWRRKGLGGILLRHLFEYARDAGVKRCFLEVKVCNLPAIGMYKKHGFV TLGRRPKYYNGVDAITMKKEL
Specific function: This Enzyme Acetylates The N-Terminal Alanine Of Ribosomal Protein S18. [C]
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR022496 - InterPro: IPR000905 - InterPro: IPR006464 [H]
Pfam domain/function: PF00583 Acetyltransf_1; PF00814 Peptidase_M22 [H]
EC number: 2.3.1.128 [C]
Molecular weight: Translated: 55306; Mature: 55306
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILAIDTSSRLAIACLEIDNNRITTVGKCIEDSGRLHSELIAEAISQACSELQSLSFIA CEEEEEECCCCEEEEEEEECCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEE VCLGPGFYTGLRSGLVAARILGLSLSIPVYGVMAHDAIYMGYLSCEEHVFCDRGLHTSQV EECCCHHHHHHHHHHHHHHHHHEEECCCEEEEEHHCEEEEEEECCCCCCHHCCCCCHHHH FSHHEPVSKSADGANHEEFCDRNTYSMGDAIHRNVPSIARTIITPAGRRQFYWSRYTGLD HHCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHCCHHHHHHHHCCCCCCEEEEHHCCCCC NDGLPIIYAGPGLIDSCDINILSQDFPFNPVFVASAHEPQFEAQKESNGTLTGSPRPRRT CCCCEEEEECCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCHHCCCCEECCCCCCCCC GRHIDRGSCPPNVSSTIPPGIFRARVPQAHDCAINVVSKNSMRETDTLKTDASIDKSITS CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEECCCCCHHHCCCCCCCHHHHHCC DRPNTQPILPVSAVNPVILGKLAYLQLKAKRACSRIEPFYMRRADVTLRVPSGEINKDLV CCCCCCCEEEHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHEEECCEEEECCCCCCCCCCE SIHPASLHDLPDIMKIERGSFTGEEWSSATMLQQLRLGSYFVLKVSDMPVGYAGISHPRF EECCCHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCC EDVDLETLAIDPAWRRKGLGGILLRHLFEYARDAGVKRCFLEVKVCNLPAIGMYKKHGFV CCCCCEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCEEECCCEE TLGRRPKYYNGVDAITMKKEL EECCCCCCCCCCCEEEEECCC >Mature Secondary Structure MKILAIDTSSRLAIACLEIDNNRITTVGKCIEDSGRLHSELIAEAISQACSELQSLSFIA CEEEEEECCCCEEEEEEEECCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEE VCLGPGFYTGLRSGLVAARILGLSLSIPVYGVMAHDAIYMGYLSCEEHVFCDRGLHTSQV EECCCHHHHHHHHHHHHHHHHHEEECCCEEEEEHHCEEEEEEECCCCCCHHCCCCCHHHH FSHHEPVSKSADGANHEEFCDRNTYSMGDAIHRNVPSIARTIITPAGRRQFYWSRYTGLD HHCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHCCHHHHHHHHCCCCCCEEEEHHCCCCC NDGLPIIYAGPGLIDSCDINILSQDFPFNPVFVASAHEPQFEAQKESNGTLTGSPRPRRT CCCCEEEEECCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCHHCCCCEECCCCCCCCC GRHIDRGSCPPNVSSTIPPGIFRARVPQAHDCAINVVSKNSMRETDTLKTDASIDKSITS CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEECCCCCHHHCCCCCCCHHHHHCC DRPNTQPILPVSAVNPVILGKLAYLQLKAKRACSRIEPFYMRRADVTLRVPSGEINKDLV CCCCCCCEEEHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHEEECCEEEECCCCCCCCCCE SIHPASLHDLPDIMKIERGSFTGEEWSSATMLQQLRLGSYFVLKVSDMPVGYAGISHPRF EECCCHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCC EDVDLETLAIDPAWRRKGLGGILLRHLFEYARDAGVKRCFLEVKVCNLPAIGMYKKHGFV CCCCCEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCEEECCCEE TLGRRPKYYNGVDAITMKKEL EECCCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Acetyl-CoA; ribosomal-protein L-alanine [C]
Specific reaction: Acetyl-CoA + ribosomal-protein L-alanine = CoA +ribosomal-protein N-acetyl-L-alanine [C]
General reaction: Acyl group transfer [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]