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The map label for this gene is 28572327

Identifier: 28572327

GI number: 28572327

Start: 202542

End: 203240

Strand: Reverse

Name: 28572327

Synonym: TW164

Alternate gene names: NA

Gene position: 203240-202542 (Counterclockwise)

Preceding gene: 28572350

Following gene: 28572326

Centisome position: 21.95

GC content: 46.78

Gene sequence:

>699_bases
ATGCCAAAGAGTAACAAGAAAGCACCCGGGCGCATTGCGCAGATAATGCAGGTTCTTCGTATAGCCTGTTCGGGTAGGCC
AAAGGTGGTTGTTTATCTGATAGCAGCCGGCATCACTCCGCTGGTCGCGGGGATTAGTGCTGCCGTTATTTTGGCCTATA
CCTCGATATTAGTGTTTATTCTTTTGATTCTAATCTCTGTTGGTGCTGCATTGTTAAGTTTTATGATCACACTTGGTAAA
CAAGCTGAAAAGGTCGCGTATAGCCAGGTGGAGGGCCGCCCCGGGGCAACGGGGGCTGTTATAAAAACCTTTAGAGGATG
CTGGCAGACCAGTGAGATACCAGTTGCTGTGAACCCTAAAACTGCAGATGCAATATACAGGGCAGTTGGTAAATGTGGGG
TTGTTCTGATTATCGAGGGAATGAGACAAAGGGCCCAGAAAATGCTGGCCGAAGAACAGCGCAGGGTAAAACGTGTGCTT
CCTAACATACAGATCCATGTTCTGAATGTAAACCATCTAGATCCAAAGTCCGTACCATTGAATAGACTTGGTAAAAAAAT
GAGGTCCCTAAAGAAAACCCTTCATCGAAGCGAAGTGTGGAAGGCTGGCAAGCTTCTGGATGCCATTCCAAAAAATTACA
TGCCAGTACCAAAGGGAATGGATCTAAAGAAACCAGTCAAGCGACCTTCACGGGGTTGA

Upstream 100 bases:

>100_bases
AATCACATACTCGAATATCGCGCATATTGTTTTGCACCTTAGCGAATAAGCACAAATTGTTGAAAACTAAAGTATTCTGG
TACCCTGAGGTGGTTTAGAA

Downstream 100 bases:

>100_bases
GTATCGTACACGGTCAGATCGCTCGGTACGTAACCTGAGTCACGCTGCACGCATCATACATAGTTAGTGCATTTTGGGTA
TTTGAGTTTGTTATTTACAT

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MPKSNKKAPGRIAQIMQVLRIACSGRPKVVVYLIAAGITPLVAGISAAVILAYTSILVFILLILISVGAALLSFMITLGK
QAEKVAYSQVEGRPGATGAVIKTFRGCWQTSEIPVAVNPKTADAIYRAVGKCGVVLIIEGMRQRAQKMLAEEQRRVKRVL
PNIQIHVLNVNHLDPKSVPLNRLGKKMRSLKKTLHRSEVWKAGKLLDAIPKNYMPVPKGMDLKKPVKRPSRG

Sequences:

>Translated_232_residues
MPKSNKKAPGRIAQIMQVLRIACSGRPKVVVYLIAAGITPLVAGISAAVILAYTSILVFILLILISVGAALLSFMITLGK
QAEKVAYSQVEGRPGATGAVIKTFRGCWQTSEIPVAVNPKTADAIYRAVGKCGVVLIIEGMRQRAQKMLAEEQRRVKRVL
PNIQIHVLNVNHLDPKSVPLNRLGKKMRSLKKTLHRSEVWKAGKLLDAIPKNYMPVPKGMDLKKPVKRPSRG
>Mature_231_residues
PKSNKKAPGRIAQIMQVLRIACSGRPKVVVYLIAAGITPLVAGISAAVILAYTSILVFILLILISVGAALLSFMITLGKQ
AEKVAYSQVEGRPGATGAVIKTFRGCWQTSEIPVAVNPKTADAIYRAVGKCGVVLIIEGMRQRAQKMLAEEQRRVKRVLP
NIQIHVLNVNHLDPKSVPLNRLGKKMRSLKKTLHRSEVWKAGKLLDAIPKNYMPVPKGMDLKKPVKRPSRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021315 [H]

Pfam domain/function: PF11139 DUF2910 [H]

EC number: NA

Molecular weight: Translated: 25342; Mature: 25211

Theoretical pI: Translated: 11.37; Mature: 11.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKSNKKAPGRIAQIMQVLRIACSGRPKVVVYLIAAGITPLVAGISAAVILAYTSILVFI
CCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLILISVGAALLSFMITLGKQAEKVAYSQVEGRPGATGAVIKTFRGCWQTSEIPVAVNPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEECCC
TADAIYRAVGKCGVVLIIEGMRQRAQKMLAEEQRRVKRVLPNIQIHVLNVNHLDPKSVPL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCH
NRLGKKMRSLKKTLHRSEVWKAGKLLDAIPKNYMPVPKGMDLKKPVKRPSRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCC
>Mature Secondary Structure 
PKSNKKAPGRIAQIMQVLRIACSGRPKVVVYLIAAGITPLVAGISAAVILAYTSILVFI
CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLILISVGAALLSFMITLGKQAEKVAYSQVEGRPGATGAVIKTFRGCWQTSEIPVAVNPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEECCC
TADAIYRAVGKCGVVLIIEGMRQRAQKMLAEEQRRVKRVLPNIQIHVLNVNHLDPKSVPL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCH
NRLGKKMRSLKKTLHRSEVWKAGKLLDAIPKNYMPVPKGMDLKKPVKRPSRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]