Click here to switch to the map view.

The map label for this gene is 28572216

Identifier: 28572216

GI number: 28572216

Start: 38634

End: 40475

Strand: Direct

Name: 28572216

Synonym: TW043

Alternate gene names: NA

Gene position: 38634-40475 (Clockwise)

Preceding gene: 28572213

Following gene: 28572217

Centisome position: 4.17

GC content: 49.67

Gene sequence:

>1842_bases
GTGCGGATGAGTGACAGTGATACGAATAGCATTCCGCTTACACGTTCGGCGCTGCGCAAAATAGAAAAAAGTAGCGCCGC
CGGGGCGTCGGGACTGCGACGATTGCGCCTGGCGGTGCTTGTTCCGCTGTTGCTGTTTATTTCTCTGGCAGGCTGGGCCC
TCTCTTCCCCGATTGGAAGCAGCCCCGATGATGATTTCCATCTCGCCAGTGCATGGTGTGCCCTCGGTGACAGGCCTGGC
TTATGTGAATCATCTGGCATAAAGGATGCTAAAAAGGTTCCCACTACGATTTTGGACACCTGGCATGGTAAAGGTAGCCG
CCATGGCAATTTGTATTGTTTCCTAAATGGTGTTAGCCCAGAGTGTCAGAACAAATGGCTTGGCAATACTGATCACAAGA
TGCAGGATACCGGTCGTGTTAACTTTGGCAATAATGCACAGTATACGAATCTTTATTACTCAGCTATGGGTTTATTGGCC
TCTGATGATGTGCGCGCTTCCGTATGGGGCATGCGGCTTATAAACGCCTTTATATTCACCGCTCTGAGTTTGCTACTTTA
TCTTGCATTGCCGCAGCCGCGCAGGGCGGCTTTGCTGATCACATGGTCACTAAGCCTTGTTCCGGCCGCAATGTTTTTCA
TACCCTCGTCTAACCCATCATCATGGGCGTTTATCGGGGTACCGTCGACCTTTTTCGCAATGCTTTCCTTCTTTGAAACT
CGGGGTAGGAGAAAAATTTGCCTCGGCATTATCGCGGTTTTTTCAGTTTTGCTATCAGCTTTTGCCAGGTCTGATGCAGC
CATCTATGCCCTTCTGGCAATTGTAATCAGCGGAATCTTGCAGGTGCGGGATTTTAAAAACCCCTGGGCTCAGTTTGCAT
TGCCGGTTGCTCTTGGCATTATGTCCATTGCTACATTCTTTATGTATCCGCTAAATGTTGCAGCGACTGGACTTCCTGCT
ACTGGCGCTAGAGACTATGGCTTTATAACCTTCGTTAAAAACATTATTTTTATACCGAGTTCTTTTTTACCGAGCGTATT
TACCCCGCAGTTCCTGGGGTGGCTTGATGTGCCCCTGTATCCCCCTGCATATGTGTTTGTCGCCATTGCAGCGCTAATTG
TCGTTGGATTTGCCCTTGGGGTTGGAGGGGTGCGCAAGCTATTTGCGGTTCTGCTGACTCTTGCGGCATTGATTATCGCG
CCATTGTATGTATCTCAAGTTGCGGGGATTACCGCTGATAAACTGCTTCAGCCGAGATATTTAGCTCCTCTTGCGATTAT
CTTCATTGCTGTGGTTCTGTATACCGGCTTTGGTGAGGTCCTCCAGATAAAGAAACGATATATGGCTGTTATTTTTTTTC
TAATTGCCCCCGCTAACGCATTCGGTATTTTTTCCCTGCTCAGGCATTATGATGCCCTGCCAAGTTTTTTGGGTGGCGCT
TTACCGCCTACATCAGACGGGCCCAATGCGGGCGCCAGCCGCGATGCGCTCGCTGGGCATCACCCCCCCGGATCCATTTC
TGCGCCGGATGGGGCTGGTACTTCTGGTGAACATTCGGGATCATGGTGGTGGCCTGGGTTTCCCGTTTCTCCGATTTTGC
TTTTCAGCGTAGTTGTTGCATCTTTCACGCTTGCATTGTTAATTGCCTTGCGCGATGTGCTCAAAATACGCAATGAGGTG
AATATAGCGAATGAAACCGAGAAGGCTTTGGCACGTGCCAGGCGTCTGAGCGTATCTGACACGCCAGCGCTTGTCAATGT
TGGAACCGGAATGATAACCCTTTCCAAGATATCTAACGCAACGGCCTCTATAACGCTCGAGGATGCAGAAGACCAATCGT
AA

Upstream 100 bases:

>100_bases
GCCATTACCCGAGAAAACGGTAGAGTTGTGGCTGGTAAAAAGTATTATTGAAGCGGTGCTCGAGCGTCGGCGGGCTTTTA
TATTGCGATGATAACGGCAG

Downstream 100 bases:

>100_bases
CACTTATCCGGTTTCTTTCTTCTGTATATGTGATCTATGCCTGTGTTATGCTTCTGCCTAAGATGCATCAGTTGATGTTA
TCTGTTTAGATAACATATGT

Product: large integral membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 613; Mature: 613

Protein sequence:

>613_residues
MRMSDSDTNSIPLTRSALRKIEKSSAAGASGLRRLRLAVLVPLLLFISLAGWALSSPIGSSPDDDFHLASAWCALGDRPG
LCESSGIKDAKKVPTTILDTWHGKGSRHGNLYCFLNGVSPECQNKWLGNTDHKMQDTGRVNFGNNAQYTNLYYSAMGLLA
SDDVRASVWGMRLINAFIFTALSLLLYLALPQPRRAALLITWSLSLVPAAMFFIPSSNPSSWAFIGVPSTFFAMLSFFET
RGRRKICLGIIAVFSVLLSAFARSDAAIYALLAIVISGILQVRDFKNPWAQFALPVALGIMSIATFFMYPLNVAATGLPA
TGARDYGFITFVKNIIFIPSSFLPSVFTPQFLGWLDVPLYPPAYVFVAIAALIVVGFALGVGGVRKLFAVLLTLAALIIA
PLYVSQVAGITADKLLQPRYLAPLAIIFIAVVLYTGFGEVLQIKKRYMAVIFFLIAPANAFGIFSLLRHYDALPSFLGGA
LPPTSDGPNAGASRDALAGHHPPGSISAPDGAGTSGEHSGSWWWPGFPVSPILLFSVVVASFTLALLIALRDVLKIRNEV
NIANETEKALARARRLSVSDTPALVNVGTGMITLSKISNATASITLEDAEDQS

Sequences:

>Translated_613_residues
MRMSDSDTNSIPLTRSALRKIEKSSAAGASGLRRLRLAVLVPLLLFISLAGWALSSPIGSSPDDDFHLASAWCALGDRPG
LCESSGIKDAKKVPTTILDTWHGKGSRHGNLYCFLNGVSPECQNKWLGNTDHKMQDTGRVNFGNNAQYTNLYYSAMGLLA
SDDVRASVWGMRLINAFIFTALSLLLYLALPQPRRAALLITWSLSLVPAAMFFIPSSNPSSWAFIGVPSTFFAMLSFFET
RGRRKICLGIIAVFSVLLSAFARSDAAIYALLAIVISGILQVRDFKNPWAQFALPVALGIMSIATFFMYPLNVAATGLPA
TGARDYGFITFVKNIIFIPSSFLPSVFTPQFLGWLDVPLYPPAYVFVAIAALIVVGFALGVGGVRKLFAVLLTLAALIIA
PLYVSQVAGITADKLLQPRYLAPLAIIFIAVVLYTGFGEVLQIKKRYMAVIFFLIAPANAFGIFSLLRHYDALPSFLGGA
LPPTSDGPNAGASRDALAGHHPPGSISAPDGAGTSGEHSGSWWWPGFPVSPILLFSVVVASFTLALLIALRDVLKIRNEV
NIANETEKALARARRLSVSDTPALVNVGTGMITLSKISNATASITLEDAEDQS
>Mature_613_residues
MRMSDSDTNSIPLTRSALRKIEKSSAAGASGLRRLRLAVLVPLLLFISLAGWALSSPIGSSPDDDFHLASAWCALGDRPG
LCESSGIKDAKKVPTTILDTWHGKGSRHGNLYCFLNGVSPECQNKWLGNTDHKMQDTGRVNFGNNAQYTNLYYSAMGLLA
SDDVRASVWGMRLINAFIFTALSLLLYLALPQPRRAALLITWSLSLVPAAMFFIPSSNPSSWAFIGVPSTFFAMLSFFET
RGRRKICLGIIAVFSVLLSAFARSDAAIYALLAIVISGILQVRDFKNPWAQFALPVALGIMSIATFFMYPLNVAATGLPA
TGARDYGFITFVKNIIFIPSSFLPSVFTPQFLGWLDVPLYPPAYVFVAIAALIVVGFALGVGGVRKLFAVLLTLAALIIA
PLYVSQVAGITADKLLQPRYLAPLAIIFIAVVLYTGFGEVLQIKKRYMAVIFFLIAPANAFGIFSLLRHYDALPSFLGGA
LPPTSDGPNAGASRDALAGHHPPGSISAPDGAGTSGEHSGSWWWPGFPVSPILLFSVVVASFTLALLIALRDVLKIRNEV
NIANETEKALARARRLSVSDTPALVNVGTGMITLSKISNATASITLEDAEDQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65811; Mature: 65811

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMSDSDTNSIPLTRSALRKIEKSSAAGASGLRRLRLAVLVPLLLFISLAGWALSSPIGS
CCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SPDDDFHLASAWCALGDRPGLCESSGIKDAKKVPTTILDTWHGKGSRHGNLYCFLNGVSP
CCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHHCCCCCCCCCCEEEEEECCCH
ECQNKWLGNTDHKMQDTGRVNFGNNAQYTNLYYSAMGLLASDDVRASVWGMRLINAFIFT
HHHCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ALSLLLYLALPQPRRAALLITWSLSLVPAAMFFIPSSNPSSWAFIGVPSTFFAMLSFFET
HHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHEEECCCCCCEEEEECCHHHHHHHHHHHH
RGRRKICLGIIAVFSVLLSAFARSDAAIYALLAIVISGILQVRDFKNPWAQFALPVALGI
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
MSIATFFMYPLNVAATGLPATGARDYGFITFVKNIIFIPSSFLPSVFTPQFLGWLDVPLY
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHCCHHCCHHHHCCCCCCCC
PPAYVFVAIAALIVVGFALGVGGVRKLFAVLLTLAALIIAPLYVSQVAGITADKLLQPRY
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHH
LAPLAIIFIAVVLYTGFGEVLQIKKRYMAVIFFLIAPANAFGIFSLLRHYDALPSFLGGA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
LPPTSDGPNAGASRDALAGHHPPGSISAPDGAGTSGEHSGSWWWPGFPVSPILLFSVVVA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
SFTLALLIALRDVLKIRNEVNIANETEKALARARRLSVSDTPALVNVGTGMITLSKISNA
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCEEEHHHHCCC
TASITLEDAEDQS
EEEEEEECCCCCC
>Mature Secondary Structure
MRMSDSDTNSIPLTRSALRKIEKSSAAGASGLRRLRLAVLVPLLLFISLAGWALSSPIGS
CCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SPDDDFHLASAWCALGDRPGLCESSGIKDAKKVPTTILDTWHGKGSRHGNLYCFLNGVSP
CCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHHCCCCCCCCCCEEEEEECCCH
ECQNKWLGNTDHKMQDTGRVNFGNNAQYTNLYYSAMGLLASDDVRASVWGMRLINAFIFT
HHHCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ALSLLLYLALPQPRRAALLITWSLSLVPAAMFFIPSSNPSSWAFIGVPSTFFAMLSFFET
HHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHEEECCCCCCEEEEECCHHHHHHHHHHHH
RGRRKICLGIIAVFSVLLSAFARSDAAIYALLAIVISGILQVRDFKNPWAQFALPVALGI
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
MSIATFFMYPLNVAATGLPATGARDYGFITFVKNIIFIPSSFLPSVFTPQFLGWLDVPLY
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHCCHHCCHHHHCCCCCCCC
PPAYVFVAIAALIVVGFALGVGGVRKLFAVLLTLAALIIAPLYVSQVAGITADKLLQPRY
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHH
LAPLAIIFIAVVLYTGFGEVLQIKKRYMAVIFFLIAPANAFGIFSLLRHYDALPSFLGGA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
LPPTSDGPNAGASRDALAGHHPPGSISAPDGAGTSGEHSGSWWWPGFPVSPILLFSVVVA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
SFTLALLIALRDVLKIRNEVNIANETEKALARARRLSVSDTPALVNVGTGMITLSKISNA
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCEEEHHHHCCC
TASITLEDAEDQS
EEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA