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The map label for this gene is yqfA [C]

Identifier: 28563938

GI number: 28563938

Start: 2463802

End: 2464452

Strand: Direct

Name: yqfA [C]

Synonym: OB2410

Alternate gene names: 28563938

Gene position: 2463802-2464452 (Clockwise)

Preceding gene: 23099861

Following gene: 23099867

Centisome position: 67.86

GC content: 33.03

Gene sequence:

>651_bases
ATGAATAACTATATTAGAGAACCGATGAATGCTTTTACACATTTTATTGGAATTGTCTTATCAGTAATAGGACTAGTATT
TCTTGTCGTAAAATCAGCACAAATTAGCGCGTCTGCTCAAACGATTACTGCTGTTACTATATTTGGAGTCAGTTTAATTC
TCTTATATACAGCATCTACAGTTTATCATTCTGTCATCGCACAACCTTCAGTAATCGCATTTTTGCGTAAGTTGGATCAT
TCGATGATTTATGTTCTTATTGCAGGGACATATATTCCTTTTTGTTTGATAAGTCTTAAAGGAACAATTGGCTGGATCTT
ATTTGCAATTATTACTGTTCTTGCTTTGCTTGGAGTTTCTTTTAAACTTATATGGTTCCACTCCCCTAGATGGTTATCTA
CAATGCTATACGTAGTAATGGGTTGGATCGTTATCTTATTTAGTGGTTCTTTAGCTCCTGAACTTGGAATGGAAGGAATG
TTCCTGTTGATTATAGGGGGGATTTTATATACAGTGGGGGCACTTATTTATTGGTTAAAACCAGGATTTTTACGTTTTCG
ATATTTCGGGTTCCATGAAATCTTTCATATTTTTATTTTACTAGGTAGCATTTCTCATTATCTATGTATCTATGTTTATG
TATTAATATAA

Upstream 100 bases:

>100_bases
TCAAAACATGATTCTGTAAATGTTGACTATATCATGAAACACATGTATTATCGTTATATAGTTTTTAAAACTACATAACG
AAATGAAGGTGTTTTTCATA

Downstream 100 bases:

>100_bases
ATTAGCTAAATTAACGAGGCGTCGGGTAACCTTTCTTTTACTTTTTATTTCAATGGGGGCTGATCAGCCTTTCACATACC
ATACTTGATTGTGAGCAGCA

Product: hemolysin III

Products: NA

Alternate protein names: Hemolysin III; Hly-III [H]

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MNNYIREPMNAFTHFIGIVLSVIGLVFLVVKSAQISASAQTITAVTIFGVSLILLYTASTVYHSVIAQPSVIAFLRKLDH
SMIYVLIAGTYIPFCLISLKGTIGWILFAIITVLALLGVSFKLIWFHSPRWLSTMLYVVMGWIVILFSGSLAPELGMEGM
FLLIIGGILYTVGALIYWLKPGFLRFRYFGFHEIFHIFILLGSISHYLCIYVYVLI

Sequences:

>Translated_216_residues
MNNYIREPMNAFTHFIGIVLSVIGLVFLVVKSAQISASAQTITAVTIFGVSLILLYTASTVYHSVIAQPSVIAFLRKLDH
SMIYVLIAGTYIPFCLISLKGTIGWILFAIITVLALLGVSFKLIWFHSPRWLSTMLYVVMGWIVILFSGSLAPELGMEGM
FLLIIGGILYTVGALIYWLKPGFLRFRYFGFHEIFHIFILLGSISHYLCIYVYVLI
>Mature_216_residues
MNNYIREPMNAFTHFIGIVLSVIGLVFLVVKSAQISASAQTITAVTIFGVSLILLYTASTVYHSVIAQPSVIAFLRKLDH
SMIYVLIAGTYIPFCLISLKGTIGWILFAIITVLALLGVSFKLIWFHSPRWLSTMLYVVMGWIVILFSGSLAPELGMEGM
FLLIIGGILYTVGALIYWLKPGFLRFRYFGFHEIFHIFILLGSISHYLCIYVYVLI

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Escherichia coli, GI1789266, Length=209, Percent_Identity=40.1913875598086, Blast_Score=140, Evalue=7e-35,
Organism=Drosophila melanogaster, GI24640324, Length=235, Percent_Identity=28.5106382978723, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 24243; Mature: 24243

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNYIREPMNAFTHFIGIVLSVIGLVFLVVKSAQISASAQTITAVTIFGVSLILLYTAST
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
VYHSVIAQPSVIAFLRKLDHSMIYVLIAGTYIPFCLISLKGTIGWILFAIITVLALLGVS
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
FKLIWFHSPRWLSTMLYVVMGWIVILFSGSLAPELGMEGMFLLIIGGILYTVGALIYWLK
HEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
PGFLRFRYFGFHEIFHIFILLGSISHYLCIYVYVLI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNNYIREPMNAFTHFIGIVLSVIGLVFLVVKSAQISASAQTITAVTIFGVSLILLYTAST
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
VYHSVIAQPSVIAFLRKLDHSMIYVLIAGTYIPFCLISLKGTIGWILFAIITVLALLGVS
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
FKLIWFHSPRWLSTMLYVVMGWIVILFSGSLAPELGMEGMFLLIIGGILYTVGALIYWLK
HEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
PGFLRFRYFGFHEIFHIFILLGSISHYLCIYVYVLI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7495855 [H]