| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is folE [H]
Identifier: 284159980
GI number: 284159980
Start: 53360
End: 54070
Strand: Reverse
Name: folE [H]
Synonym: BURPS668_A0064
Alternate gene names: 284159980
Gene position: 54070-53360 (Counterclockwise)
Preceding gene: 126442565
Following gene: 126444053
Centisome position: 1.73
GC content: 67.51
Gene sequence:
>711_bases ATGACCGCGGGCAAGGCGGCGGCACCGGCCGCGCACCAGGCGGCGCGCAGGACATCGAACAAAGCGAGCAAGACGGCGAG CTCGGCGGCCACGCACGAGCCGGCCGGCGCGCCCGCGAACCGGCCGAGCCGCGACGAAGCCGAAGCGGCCGTTCGCGTGC TGCTGCGGTGGGCCGGCGACGATCCGCAACGCGAGGGGCTCGTCGATACGCCGGCGCGCGTCGTGCGCGCCTACGAGGAG TTCTTCGCCGGCTACGCGCTCGAACCGCGCGACATCCTCGCGCGCACGTTCAGCGAGGTCGACGGCTACGACGAAATGAT CGTGCTGAAGGACATCCGCTTCGAAAGCTATTGCGAGCACCATATGGTGCCGATCATCGGCCGCGCGCACGTCGCATATC TGCCGAACCATCGCGTCGTGGGCATCTCGAAGCTCGCGCGCCTCGTCGATGCGTTCGCGAAGCGCCTGCAGATCCAGGAA AAGATGACGGTGCAGATCGCCGATACGCTGTTCGACGTGCTGCAGCCGAAGGGCGTCGGCGTGATTCTCGAAGCGGCGCA CCAGTGCATCTCGACGCGCGGCATCCACAAGCCCGGCGTCGAGATGGTGACGTCGCGGATGCTCGGCACGTTCCGCACCG ATCCGGCCACGCGCCGCGAATTCCTGTCGATCGTCGCGAATCCTTCCTCGGTCAACCTGACGAACACCTAA
Upstream 100 bases:
>100_bases AGCGAGTCACGGCGCACGCTCGCGACGAAAGCATGAAACAATGATCGGCCGGCCGCAGCCTTCGCGGCCTTCATGGAGTT CAATGCATATGGCTAAAGGA
Downstream 100 bases:
>100_bases ATGCAGTCGAGCGCGAAACCAGCCACCTTACCCGTCGTGCTCGTGACGGGCGCCGCGCGCCGCGCGGGCCGCGCGTTCGC GTTGCGCTTCGCCGCGCGCG
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MTAGKAAAPAAHQAARRTSNKASKTASSAATHEPAGAPANRPSRDEAEAAVRVLLRWAGDDPQREGLVDTPARVVRAYEE FFAGYALEPRDILARTFSEVDGYDEMIVLKDIRFESYCEHHMVPIIGRAHVAYLPNHRVVGISKLARLVDAFAKRLQIQE KMTVQIADTLFDVLQPKGVGVILEAAHQCISTRGIHKPGVEMVTSRMLGTFRTDPATRREFLSIVANPSSVNLTNT
Sequences:
>Translated_236_residues MTAGKAAAPAAHQAARRTSNKASKTASSAATHEPAGAPANRPSRDEAEAAVRVLLRWAGDDPQREGLVDTPARVVRAYEE FFAGYALEPRDILARTFSEVDGYDEMIVLKDIRFESYCEHHMVPIIGRAHVAYLPNHRVVGISKLARLVDAFAKRLQIQE KMTVQIADTLFDVLQPKGVGVILEAAHQCISTRGIHKPGVEMVTSRMLGTFRTDPATRREFLSIVANPSSVNLTNT >Mature_235_residues TAGKAAAPAAHQAARRTSNKASKTASSAATHEPAGAPANRPSRDEAEAAVRVLLRWAGDDPQREGLVDTPARVVRAYEEF FAGYALEPRDILARTFSEVDGYDEMIVLKDIRFESYCEHHMVPIIGRAHVAYLPNHRVVGISKLARLVDAFAKRLQIQEK MTVQIADTLFDVLQPKGVGVILEAAHQCISTRGIHKPGVEMVTSRMLGTFRTDPATRREFLSIVANPSSVNLTNT
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=209, Percent_Identity=42.1052631578947, Blast_Score=182, Evalue=3e-46, Organism=Homo sapiens, GI4503949, Length=209, Percent_Identity=42.1052631578947, Blast_Score=182, Evalue=3e-46, Organism=Homo sapiens, GI66932970, Length=179, Percent_Identity=38.5474860335196, Blast_Score=138, Evalue=3e-33, Organism=Homo sapiens, GI66932972, Length=169, Percent_Identity=40.2366863905325, Blast_Score=136, Evalue=1e-32, Organism=Escherichia coli, GI1788476, Length=175, Percent_Identity=37.7142857142857, Blast_Score=115, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17560486, Length=176, Percent_Identity=43.75, Blast_Score=176, Evalue=7e-45, Organism=Saccharomyces cerevisiae, GI6321706, Length=181, Percent_Identity=45.3038674033149, Blast_Score=175, Evalue=4e-45, Organism=Drosophila melanogaster, GI24656782, Length=176, Percent_Identity=45.4545454545455, Blast_Score=162, Evalue=1e-40, Organism=Drosophila melanogaster, GI24656791, Length=176, Percent_Identity=45.4545454545455, Blast_Score=161, Evalue=4e-40, Organism=Drosophila melanogaster, GI24656796, Length=176, Percent_Identity=45.4545454545455, Blast_Score=161, Evalue=4e-40,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 25842; Mature: 25711
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1 ; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAGKAAAPAAHQAARRTSNKASKTASSAATHEPAGAPANRPSRDEAEAAVRVLLRWAGD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC DPQREGLVDTPARVVRAYEEFFAGYALEPRDILARTFSEVDGYDEMIVLKDIRFESYCEH CHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHH HMVPIIGRAHVAYLPNHRVVGISKLARLVDAFAKRLQIQEKMTVQIADTLFDVLQPKGVG CCCCHHCCCEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH VILEAAHQCISTRGIHKPGVEMVTSRMLGTFRTDPATRREFLSIVANPSSVNLTNT HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TAGKAAAPAAHQAARRTSNKASKTASSAATHEPAGAPANRPSRDEAEAAVRVLLRWAGD CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC DPQREGLVDTPARVVRAYEEFFAGYALEPRDILARTFSEVDGYDEMIVLKDIRFESYCEH CHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHH HMVPIIGRAHVAYLPNHRVVGISKLARLVDAFAKRLQIQEKMTVQIADTLFDVLQPKGVG CCCCHHCCCEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH VILEAAHQCISTRGIHKPGVEMVTSRMLGTFRTDPATRREFLSIVANPSSVNLTNT HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]